ConsensusXMLFile.h

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// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Clemens Groepl, Marc Sturm $
// --------------------------------------------------------------------------
 
#pragma once
 
#include <OpenMS/FORMAT/OPTIONS/PeakFileOptions.h>
#include <OpenMS/FORMAT/XMLFile.h>
#include <OpenMS/KERNEL/ConsensusMap.h>
#include <OpenMS/CONCEPT/ProgressLogger.h>
 
namespace OpenMS
{
  class ConsensusMap;
  class OPENMS_DLLAPI ConsensusXMLFile :
    public Internal::XMLFile,
    public ProgressLogger
  {
public:
    ConsensusXMLFile();
    ~ConsensusXMLFile() override;
 
    void load(const std::string& filename, ConsensusMap& map);
 
    void store(const std::string& filename, const ConsensusMap& consensus_map);
 
    PeakFileOptions& getOptions();
 
    const PeakFileOptions& getOptions() const;
 
protected:
 
    PeakFileOptions options_;
  };
} // namespace OpenMS