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CoarseIsotopePatternGenerator Member List

This is the complete list of members for CoarseIsotopePatternGenerator, including all inherited members.

approximateFromPeptideWeight(double mass, UInt num_peaks=20, UInt charge=1)CoarseIsotopePatternGeneratorstatic
approximateIntensities(double mass, UInt num_peaks=20)CoarseIsotopePatternGeneratorstatic
calcFragmentIsotopeDist(const IsotopeDistribution &fragment_isotope_dist, const IsotopeDistribution &comp_fragment_isotope_dist, const std::set< UInt > &precursor_isotopes, const double fragment_mono_mass) constCoarseIsotopePatternGenerator
calcFragmentIsotopeDist_(const IsotopeDistribution::ContainerType &fragment_isotope_dist, const IsotopeDistribution::ContainerType &comp_fragment_isotope_dist, const std::set< UInt > &precursor_isotopes) constCoarseIsotopePatternGeneratorprotected
CoarseIsotopePatternGenerator(const Size max_isotope=0, const bool round_masses=false)CoarseIsotopePatternGenerator
convolve(const IsotopeDistribution::ContainerType &left, const IsotopeDistribution::ContainerType &right) constCoarseIsotopePatternGenerator
convolvePow_(const IsotopeDistribution::ContainerType &input, Size factor) constCoarseIsotopePatternGeneratorprotected
convolveSquare_(const IsotopeDistribution::ContainerType &input) constCoarseIsotopePatternGeneratorprotected
correctMass_(const IsotopeDistribution::ContainerType &input, const double mono_weight) constCoarseIsotopePatternGeneratorprotected
estimateForFragmentFromDNAWeight(double average_weight_precursor, double average_weight_fragment, const std::set< UInt > &precursor_isotopes)CoarseIsotopePatternGenerator
estimateForFragmentFromPeptideWeight(double average_weight_precursor, double average_weight_fragment, const std::set< UInt > &precursor_isotopes)CoarseIsotopePatternGenerator
estimateForFragmentFromPeptideWeightAndS(double average_weight_precursor, UInt S_precursor, double average_weight_fragment, UInt S_fragment, const std::set< UInt > &precursor_isotopes) constCoarseIsotopePatternGenerator
estimateForFragmentFromRNAWeight(double average_weight_precursor, double average_weight_fragment, const std::set< UInt > &precursor_isotopes)CoarseIsotopePatternGenerator
estimateForFragmentFromWeightAndComp(double average_weight_precursor, double average_weight_fragment, const std::set< UInt > &precursor_isotopes, double C, double H, double N, double O, double S, double P) constCoarseIsotopePatternGenerator
estimateFromDNAWeight(double average_weight)CoarseIsotopePatternGenerator
estimateFromMonoWeightAndComp(double mono_weight, double C, double H, double N, double O, double S, double P)CoarseIsotopePatternGenerator
estimateFromPeptideMonoWeight(double mono_weight)CoarseIsotopePatternGenerator
estimateFromPeptideWeight(double average_weight)CoarseIsotopePatternGenerator
estimateFromPeptideWeightAndS(double average_weight, UInt S)CoarseIsotopePatternGenerator
estimateFromRNAMonoWeight(double mono_weight)CoarseIsotopePatternGenerator
estimateFromRNAWeight(double average_weight)CoarseIsotopePatternGenerator
estimateFromWeightAndComp(double average_weight, double C, double H, double N, double O, double S, double P)CoarseIsotopePatternGenerator
estimateFromWeightAndCompAndS(double average_weight, UInt S, double C, double H, double N, double O, double P)CoarseIsotopePatternGenerator
fillGaps_(const IsotopeDistribution::ContainerType &id) constCoarseIsotopePatternGeneratorprotected
getMaxIsotope() constCoarseIsotopePatternGenerator
getRoundMasses() constCoarseIsotopePatternGenerator
IsotopePatternGenerator()IsotopePatternGenerator
IsotopePatternGenerator(double probability_cutoff)IsotopePatternGenerator
max_isotope_CoarseIsotopePatternGeneratorprotected
min_prob_IsotopePatternGeneratorprotected
operator=(const CoarseIsotopePatternGenerator &iso)CoarseIsotopePatternGenerator
round_masses_CoarseIsotopePatternGeneratorprotected
run(const EmpiricalFormula &) const overrideCoarseIsotopePatternGeneratorvirtual
setMaxIsotope(const Size &max_isotope)CoarseIsotopePatternGenerator
setRoundMasses(const bool round_masses)CoarseIsotopePatternGenerator
~CoarseIsotopePatternGenerator() overrideCoarseIsotopePatternGenerator
~IsotopePatternGenerator()IsotopePatternGeneratorvirtual