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DecoyGenerator Member List

This is the complete list of members for DecoyGenerator, including all inherited members.

DecoyGenerator()DecoyGenerator
reversePeptides(const AASequence &protein, const std::string &protease) constDecoyGenerator
reverseProtein(const AASequence &protein) constDecoyGenerator
SequenceIdentity_(const std::string &decoy, const std::string &target)DecoyGeneratorprivatestatic
setSeed(UInt64 seed)DecoyGenerator
shuffle(const AASequence &protein, const std::string &protease, int decoy_factor=1)DecoyGenerator
shufflePeptides(const AASequence &aas, const std::string &protease, const int max_attempts=100)DecoyGenerator
shuffler_DecoyGeneratorprivate
td_cache_DecoyGeneratorprivate
~DecoyGenerator()=defaultDecoyGenerator