SageAdapter

Identifies peptides in MS/MS spectra via sage.

pot. predecessor tools	→ SageAdapter →	pot. successor tools
any signal-/preprocessing tool (in mzML format)		IDFilter or any protein/peptide processing tool

Sage must be installed before this wrapper can be used.

Only the closed-search identification mode of Sage is supported by this adapter. Currently, also neither "wide window" (= open or DIA) mode, nor "chimeric" mode is supported, because of limitations in OpenMS' data structures and file formats.

The command line parameters of this tool are:

SageAdapter -- Annotates MS/MS spectra using Sage.
Full documentation: http://www.openms.de/doxygen/release/3.6.0/html/TOPP_SageAdapter.html
Version: 3.6.0 Sep 30 2026, 08:28:16, Revision: 5d5cbff
To cite OpenMS:
 + Pfeuffer, J., Bielow, C., Wein, S. et al.. OpenMS 3 enables reproducible analysis of large-scale mass spec
   trometry data. Nat Methods (2024). doi:10.1038/s41592-024-02197-7.
To cite SageAdapter:
 + Michael Lazear. Sage: An Open-Source Tool for Fast Proteomics Searching and Quantification at Scale. J. 
   Proteome Res. 2023, 22, 11, 3652–3659. doi:https://doi.org/10.1021/acs.jproteome.3c00486.

Usage:
  SageAdapter <options>

Options (mandatory options marked with '*'):
  -in <files>*                                            Input files separated by blank (valid formats: 'mzM
                                                          L', 'd', 'raw')
  -out <file>*                                            Output file (.idXML) or directory bundle (.idparque
                                                          t) containing all search results. (valid formats: 
                                                          'idXML', 'idparquet')
  -database <file>*                                       FASTA file (valid formats: 'FASTA', 'fa', 'faa')
  -sage_executable <executable>*                          The Sage executable. Provide a full or relative 
                                                          path, or make sure it can be found in your PATH 
                                                          environment.
  -decoy_prefix <prefix>                                  Prefix on protein accession used to distinguish 
                                                          decoy from target proteins. Decoy proteins in the 
                                                          FASTA file should have this prefix in their accessi
                                                          on. NOTE: Decoy suffix is currently not supported 
                                                          by Sage. (default: 'DECOY_')
  -batch_size <int>                                       Number of files to load and search in parallel. 
                                                          Setting this to 0 (default) uses an automatic value
                                                           (typically number of CPUs/2). Default: 0 (default:
                                                           '0')
  -precursor_tol_left <double>                            Start (left side) of the precursor tolerance window
                                                           w.r.t. precursor location. This value is relative 
                                                          to the experimental precursor mass and used to defi
                                                          ne the lower bound of the search window. Must be 
                                                          negative (e.g., -6 ppm means 6 ppm below the observ
                                                          ed mass). (default: '-6.0')
  -precursor_tol_right <double>                           End (right side) of the precursor tolerance window 
                                                          w.r.t. precursor location. This value is added to 
                                                          the experimental precursor mass to define the upper
                                                           bound of the search window. Must be positive (e.g.
                                                          , 6 ppm means 6 ppm above the observed mass). (defa
                                                          ult: '6.0')
  -precursor_tol_unit <unit>                              Unit of precursor tolerance (ppm or Da) (default: 
                                                          'ppm') (valid: 'ppm', 'Da')
  -fragment_tol_left <double>                             Start (left side) of the fragment tolerance window 
                                                          w.r.t. fragment location. This value reduces the 
                                                          experimental fragment mass to define the lower boun
                                                          d of the search window. Must be negative (e.g., 
                                                          -20 ppm means 20 ppm below the observed mass). (def
                                                          ault: '-20.0')
  -fragment_tol_right <double>                            End (right side) of the fragment tolerance window 
                                                          w.r.t. fragment location. This value is added to 
                                                          the experimental fragment mass to define the upper 
                                                          bound of the search window. Must be positive (e.g.,
                                                           20 ppm means 20 ppm above the observed mass). (def
                                                          ault: '20.0')
  -fragment_tol_unit <unit>                               Unit of fragment tolerance (ppm or Da) (default: 
                                                          'ppm') (valid: 'ppm', 'Da')
  -enzyme <cleavage site>                                 The enzyme used for peptide digestion. (default: 
                                                          'Trypsin') (valid: 'V8-E', 'leukocyte elastase', 
                                                          'proline endopeptidase', 'glutamyl endopeptidase', 
                                                          'Alpha-lytic protease', '2-iodobenzoate', 'iodosobe
                                                          nzoate', 'staphylococcal protease/D', 'proline-endo
                                                          peptidase/HKR', 'Glu-C+P', 'PepsinA + P', 'cyanogen
                                                          -bromide', 'Clostripain/P', 'elastase-trypsin-chymo
                                                          trypsin', 'no cleavage', 'unspecific cleavage', 
                                                          'Arg-C/P', 'Asp-N', 'Asp-N/B', 'Asp-N_ambic', 'Chym
                                                          ...
                                                          'PepsinA', 'TrypChymo', 'Trypsin/P', 'V8-DE')
  -fixed_modifications <mods>                             Fixed modifications, specified using Unimod (www.un
                                                          imod.org) terms, e.g. 'Carbamidomethyl (C)' or 'Oxi
                                                          dation (M)' (default: '[Carbamidomethyl (C)]') (val
                                                          id: '15N-oxobutanoic (N-term C)', '15N-oxobutanoic 
                                                          (Protein N-term S)', '15N-oxobutanoic (Protein N-te
                                                          rm T)', '2-dimethylsuccinyl (C)', '2-methylbutyryl 
                                                          (K)', '2-monomethylsuccinyl (C)', '2-nitrobenzyl 
                                                          (Y)', '2-succinyl (C)', '2HPG (R)', '2PCA-triazole-
                                                          ethanethiol (N-term)', '3-deoxyglucosone (R)', '3-h
                                                          ydroxy-3-methylglutaryl (K)', '3-hydroxybenzyl-phos
                                                          ...
                                                          , 'ZGB (N-term)', 'ZQG (K)')
  -variable_modifications <mods>                          Variable modifications, specified using Unimod (www
                                                          .unimod.org) terms, e.g. 'Carbamidomethyl (C)' or 
                                                          'Oxidation (M)' (default: '[Oxidation (M)]') (valid
                                                          : '15N-oxobutanoic (N-term C)', '15N-oxobutanoic 
                                                          (Protein N-term S)', '15N-oxobutanoic (Protein N-te
                                                          rm T)', '2-dimethylsuccinyl (C)', '2-methylbutyryl 
                                                          (K)', '2-monomethylsuccinyl (C)', '2-nitrobenzyl 
                                                          (Y)', '2-succinyl (C)', '2HPG (R)', '2PCA-triazole-
                                                          ethanethiol (N-term)', '3-deoxyglucosone (R)', '3-h
                                                          ydroxy-3-methylglutaryl (K)', '3-hydroxybenzyl-phos
                                                          ...
                                                          , 'ZGB (N-term)', 'ZQG (K)')
  -q_value_threshold <double>                             The FDR (False Discovery Rate) threshold for filter
                                                          ing peptides. PSMs with q-values above this thresho
                                                          ld will be excluded. Default: 1 (no filtering) (def
                                                          ault: '1.0')
  -annotate_matches <bool>                                Whether fragment ion matches should be annotated 
                                                          in the output. This provides additional information
                                                           about which theoretical ions matched experimental 
                                                          peaks. Default: true (default: 'true')
  -deisotope <bool>                                       Perform deisotoping and charge state deconvolution 
                                                          on MS2 spectra. Recommended for high-resolution 
                                                          MS2 data. May interfere with TMT-MS2 quantification
                                                          . Default: false (default: 'false')
  -chimera <bool>                                         Enable chimeric spectra search mode. When enabled, 
                                                          multiple peptide identifications can be reported 
                                                          for each MS2 scan, useful for co-fragmenting peptid
                                                          es. Default: false (default: 'false')
  -predict_rt <bool>                                      Use retention time prediction model as a feature 
                                                          for machine learning scoring. Note: This is incompa
                                                          tible with label-free quantification (LFQ). Default
                                                          : false (default: 'false')
  -wide_window <bool>                                     Enable wide-window/DIA search mode. When enabled, 
                                                          the precursor_tol parameter is ignored and a dynami
                                                          c precursor tolerance is used. Default: false (defa
                                                          ult: 'false')
  -smoothing <bool>                                       Whether to smooth the PTM (post-translational modif
                                                          ication) mass histogram and pick local maxima. If 
                                                          false, uses raw histogram data. Default: true (defa
                                                          ult: 'true')
  -reindex <choice>                                       Recalculate peptide to protein association using 
                                                          OpenMS. Annotates target-decoy information. (defaul
                                                          t: 'true') (valid: 'true', 'false')

PeptideIndexing:
  -PeptideIndexing:allow_nterm_protein_cleavage <choice>  Allow the protein N-terminus amino acid to clip. 
                                                          (default: 'true') (valid: 'true', 'false')

                                                          
Common TOPP options:
  -ini <file>                                             Use the given TOPP INI file
  -threads <n>                                            Sets the number of threads allowed to be used by 
                                                          the TOPP tool (0 = all available cores) (default: 
                                                          '1')
  -write_ini <file>                                       Writes the default configuration file
  --help                                                  Shows options
  --helphelp                                              Shows all options (including advanced)

INI file documentation of this tool:

Legend:

required parameter

advanced parameter

This section lists all parameters supported by the tool. Parameters are organized into hierarchical subsections that group related settings together. Subsections may contain further subsections or individual parameters.

Each parameter entry contains the following information:

• Name The identifier used in configuration files and on the command line.
• Default value The value used if the parameter is not explicitly specified.
• Description A short explanation describing the purpose and behavior of the parameter.
• Tags Additional metadata associated with the parameter.
• Restrictions Allowed value ranges for numeric parameters or valid options for string parameters.

Parameter tags provide additional information about how a parameter is used. Some tags indicate whether a parameter is required or intended for advanced configuration, while others may be used internally by OpenMS or workflow tools.

Parameters highlighted as required must be specified for the tool to run successfully. Parameters marked as advanced allow fine-tuning of algorithm behavior and are typically not needed for standard workflows.

+SageAdapterAnnotates MS/MS spectra using Sage.

version3.6.0 Version of the tool that generated this parameters file.

++1Instance '1' section for 'SageAdapter'

in[] Input files separated by blankinput file*.mzML, *.d, *.raw

out Output file (.idXML) or directory bundle (.idparquet) containing all search results.output file*.idXML, *.idparquet

database FASTA fileinput file*.FASTA, *.fa, *.faa

sage_executablesage The Sage executable. Provide a full or relative path, or make sure it can be found in your PATH environment.input file, is_executable

decoy_prefixDECOY_ Prefix on protein accession used to distinguish decoy from target proteins. Decoy proteins in the FASTA file should have this prefix in their accession. NOTE: Decoy suffix is currently not supported by Sage.

batch_size0 Number of files to load and search in parallel. Setting this to 0 (default) uses an automatic value (typically number of CPUs/2). Default: 0

precursor_tol_left-6.0 Start (left side) of the precursor tolerance window w.r.t. precursor location. This value is relative to the experimental precursor mass and used to define the lower bound of the search window. Must be negative (e.g., -6 ppm means 6 ppm below the observed mass).

precursor_tol_right6.0 End (right side) of the precursor tolerance window w.r.t. precursor location. This value is added to the experimental precursor mass to define the upper bound of the search window. Must be positive (e.g., 6 ppm means 6 ppm above the observed mass).

precursor_tol_unitppm Unit of precursor tolerance (ppm or Da)ppm, Da

fragment_tol_left-20.0 Start (left side) of the fragment tolerance window w.r.t. fragment location. This value reduces the experimental fragment mass to define the lower bound of the search window. Must be negative (e.g., -20 ppm means 20 ppm below the observed mass).

fragment_tol_right20.0 End (right side) of the fragment tolerance window w.r.t. fragment location. This value is added to the experimental fragment mass to define the upper bound of the search window. Must be positive (e.g., 20 ppm means 20 ppm above the observed mass).

fragment_tol_unitppm Unit of fragment tolerance (ppm or Da)ppm, Da

min_matched_peaks6 Minimum number of b+y ions required to match for PSM to be reported. Default: 6

min_peaks15 Minimum number of peaks required for a spectrum to be considered. Spectra with fewer peaks will be ignored. Default: 15

max_peaks150 Take the top N most intense MS2 peaks to search. Default: 150

report_psms1 Number of peptide-spectrum matches (PSMs) to report for each spectrum. The top N scoring PSMs will be reported. Values higher than 1 can be useful for chimeric spectra but may affect downstream statistical analysis. Default: 1

bucket_size8192 How many fragments are in each internal mass bucket. Default: 8192 (optimal for high-resolution data). Try increasing it to 32768 or 65536 for low-resolution data. See also: fragment_tol_*

min_len5 Minimum peptide length (in amino acids). Default: 5

max_len50 Maximum peptide length (in amino acids). Default: 50

missed_cleavages2 Maximum number of missed enzymatic cleavages to allow in peptide generation. Default: 2

fragment_min_mz200.0 Minimum fragment m/z to consider. Fragment ions below this m/z will be ignored. Default: 200.0

fragment_max_mz2000.0 Maximum fragment m/z to consider. Fragment ions above this m/z will be ignored. Default: 2000.0

peptide_min_mass500.0 Minimum monoisotopic peptide mass to consider for in silico digestion. Peptides below this mass will be excluded from the search database. Default: 500.0

peptide_max_mass5000.0 Maximum monoisotopic peptide mass to consider for in silico digestion. Peptides above this mass will be excluded from the search database. Default: 5000.0

min_ion_index2 Minimum ion index to consider for preliminary scoring. This parameter controls which fragment ions are used in preliminary scoring. Default: 2 (skips b1/b2/y1/y2 ions, which are often missing or unreliable). Setting this to 1 would only skip b1/y1 ions. Does not affect the final scoring of PSMs.

max_variable_mods2 Maximum number of variable modifications allowed per peptide. Default: 2

isotope_error_range-1, 3 Range of C13 isotope errors to consider for precursor matching, specified as 'start,end' (e.g., '-1,3'). For a range of '-1,3', Sage will consider all isotope errors from -1 to +3 (i.e., -1, 0, 1, 2, 3). This is useful when the monoisotopic peak may not be selected. Can include negative values. Default: '-1,3'. Note: Searching with isotope errors is slower than using a wider precursor tolerance.

charges2, 5 Range of precursor charge states to consider if not annotated in the file, specified as 'start,end' (e.g., '2,5'). For a range of '2,5', Sage will consider charge states 2, 3, 4, and 5. This is only used when charge state information is missing from the input file. Default: '2,5'

enzymeTrypsin The enzyme used for peptide digestion.V8-E, leukocyte elastase, proline endopeptidase, glutamyl endopeptidase, Alpha-lytic protease, 2-iodobenzoate, iodosobenzoate, staphylococcal protease/D, proline-endopeptidase/HKR, Glu-C+P, PepsinA + P, cyanogen-bromide, Clostripain/P, elastase-trypsin-chymotrypsin, no cleavage, unspecific cleavage, Arg-C/P, Asp-N, Asp-N/B, Asp-N_ambic, Chymotrypsin, Chymotrypsin/P, CNBr, Formic_acid, Lys-C, Trypsin, Arg-C, Lys-N, Lys-C/P, PepsinA, TrypChymo, Trypsin/P, V8-DE

fixed_modifications[Carbamidomethyl (C)] Fixed modifications, specified using Unimod (www.unimod.org) terms, e.g. 'Carbamidomethyl (C)' or 'Oxidation (M)'15N-oxobutanoic (N-term C), 15N-oxobutanoic (Protein N-term S), 15N-oxobutanoic (Protein N-term T), 2-dimethylsuccinyl (C), 2-methylbutyryl (K), 2-monomethylsuccinyl (C), 2-nitrobenzyl (Y), 2-succinyl (C), 2HPG (R), 2PCA-triazole-ethanethiol (N-term), 3-deoxyglucosone (R), 3-hydroxy-3-methylglutaryl (K), 3-hydroxybenzyl-phosphate (K), 3-hydroxybenzyl-phosphate (S), 3-hydroxybenzyl-phosphate (T), 3-hydroxybenzyl-phosphate (Y), 3-methylglutaconyl (K), 3-methylglutaryl (K), 3-phosphoglyceryl (K), 3sulfo (N-term), 4-ONE (C), 4-ONE (H), 4-ONE (K), 4-ONE+Delta:H(-2)O(-1) (C), 4-ONE+Delta:H(-2)O(-1) (H), 4-ONE+Delta:H(-2)O(-1) (K), 4AcAllylGal (C), 6C-CysPAT (C), 6C-CysPAT (D), 6C-CysPAT (E), 6C-CysPAT (H), 6C-CysPAT (K), 6C-CysPAT (N-term), 6C-CysPAT (S), 6C-CysPAT (T), 6C-CysPAT (Y), a-type-ion (C-term), AccQTag (K), AccQTag (N-term), Acetoacetyl (K), Acetyl (C), Acetyl (H), Acetyl (K), Acetyl (N-term), Acetyl (Protein N-term), Acetyl (R), Acetyl (S), Acetyl (T), Acetyl (Y), Acetyl:13C(2) (K), Acetyl:13C(2) (Protein N-term), Acetyl:2H(3) (H), Acetyl:2H(3) (K), Acetyl:2H(3) (N-term), Acetyl:2H(3) (Protein N-term), Acetyl:2H(3) (S), Acetyl:2H(3) (T), Acetyl:2H(3) (Y), Acetyldeoxyhypusine (K), Acetylhypusine (K), ADP-Ribosyl (C), ADP-Ribosyl (D), ADP-Ribosyl (E), ADP-Ribosyl (K), ADP-Ribosyl (N), ADP-Ribosyl (R), ADP-Ribosyl (S), ADP-Ribosyl (T), AEBS (H), AEBS (K), AEBS (Protein N-term), AEBS (S), AEBS (Y), AEC-MAEC (S), AEC-MAEC (T), AEC-MAEC:2H(4) (S), AEC-MAEC:2H(4) (T), AFB1_Dialdehyde (K), AHA-Alkyne (M), AHA-Alkyne-KDDDD (M), AHA-SS (M), AHA-SS_CAM (M), Ahx2+Hsl (C-term), Ala->Arg (A), Ala->Asn (A), Ala->Asp (A), Ala->Cys (A), Ala->Gln (A), Ala->Glu (A), Ala->Gly (A), Ala->His (A), Ala->Lys (A), Ala->Met (A), Ala->Phe (A), Ala->Pro (A), Ala->Ser (A), Ala->Thr (A), Ala->Trp (A), Ala->Tyr (A), Ala->Val (A), Ala->Xle (A), Amidated (C-term), Amidated (Protein C-term), Amidine (K), Amidine (N-term), Amidino (C), Amino (Y), Ammonia-loss (N), Ammonia-loss (N-term C), Ammonia-loss (Protein N-term S), Ammonia-loss (Protein N-term T), Ammonium (C-term), Ammonium (D), Ammonium (E), AMTzHexNAc2 (N), AMTzHexNAc2 (S), AMTzHexNAc2 (T), Andro-H2O (C), Archaeol (C), Arg (N-term), Arg->Ala (R), Arg->Asn (R), Arg->Asp (R), Arg->Cys (R), Arg->Gln (R), Arg->Glu (R), Arg->GluSA (R), Arg->Gly (R), Arg->His (R), Arg->Lys (R), Arg->Met (R), Arg->Npo (R), Arg->Orn (R), Arg->Phe (R), Arg->Pro (R), Arg->Ser (R), Arg->Thr (R), Arg->Trp (R), Arg->Tyr (R), Arg->Val (R), Arg->Xle (R), Arg-loss (C-term R), Arg2PG (R), Argbiotinhydrazide (R), AROD (C), Asn->Ala (N), Asn->Arg (N), Asn->Asp (N), Asn->Cys (N), Asn->Gln (N), Asn->Glu (N), Asn->Gly (N), Asn->His (N), Asn->Lys (N), Asn->Met (N), Asn->Phe (N), Asn->Pro (N), Asn->Ser (N), Asn->Thr (N), Asn->Trp (N), Asn->Tyr (N), Asn->Val (N), Asn->Xle (N), Asp->Ala (D), Asp->Arg (D), Asp->Asn (D), Asp->Cys (D), Asp->Gln (D), Asp->Glu (D), Asp->Gly (D), Asp->His (D), Asp->Lys (D), Asp->Met (D), Asp->Phe (D), Asp->Pro (D), Asp->Ser (D), Asp->Thr (D), Asp->Trp (D), Asp->Tyr (D), Asp->Val (D), Asp->Xle (D), Aspartylurea (H), Atto495Maleimide (C), AzidoF (F), azole (C), azole (S), Bacillosamine (N), BADGE (C), BDMAPP (H), BDMAPP (K), BDMAPP (Protein N-term), BDMAPP (W), BDMAPP (Y), BEMAD_C (C), BEMAD_C:2H(6) (C), BEMAD_ST (S), BEMAD_ST (T), BEMAD_ST:2H(6) (S), BEMAD_ST:2H(6) (T), Benzoyl (K), Benzoyl (N-term), benzylguanidine (K), betaFNA (C), betaFNA (K), BHT (C), BHT (H), BHT (K), BHTOH (C), BHTOH (H), BHTOH (K), Biotin (K), Biotin (N-term), Biotin-HPDP (C), Biotin-PEG-PRA (M), Biotin-PEO-Amine (D), Biotin-PEO-Amine (E), Biotin-PEO-Amine (Protein C-term), Biotin-phenacyl (C), Biotin-phenacyl (H), Biotin-phenacyl (S), Biotin-tyramide (C), Biotin-tyramide (W), Biotin-tyramide (Y), Biotin:Aha-DADPS (M), Biotin:Aha-PC (M), Biotin:Cayman-10013 (C), Biotin:Cayman-10141 (C), Biotin:Invitrogen-M1602 (C), Biotin:Sigma-B1267 (C), Biotin:Thermo-21325 (K), Biotin:Thermo-21328 (K), Biotin:Thermo-21328 (N-term), Biotin:Thermo-21330 (K), Biotin:Thermo-21330 (N-term), Biotin:Thermo-21345 (Q), Biotin:Thermo-21360 (X), Biotin:Thermo-21901+2H2O (C), Biotin:Thermo-21901+H2O (C), Biotin:Thermo-21911 (C), Biotin:Thermo-33033 (X), Biotin:Thermo-33033-H (X), Biotin:Thermo-88310 (K), Biotin:Thermo-88317 (S), Biotin:Thermo-88317 (Y), biotinAcrolein298 (C), biotinAcrolein298 (H), biotinAcrolein298 (K), biotinAcrolein298 (Protein N-term), BisANS (K), bisANS-sulfonates (K), bisANS-sulfonates (S), bisANS-sulfonates (T), BITC (C), BITC (K), BITC (N-term), BMP-piperidinol (C), BMP-piperidinol (M), Brij35 (N-term), Brij58 (N-term), Bromo (F), Bromo (H), Bromo (W), Bromo (Y), Bromobimane (C), Butyryl (K), C8-QAT (K), C8-QAT (N-term), CAF (N-term), CAMthiopropanoyl (K), CAMthiopropanoyl (Protein N-term), Can-FP-biotin (S), Can-FP-biotin (T), Can-FP-biotin (Y), Carbamidomethyl (C), Carbamidomethyl (D), Carbamidomethyl (E), Carbamidomethyl (H), Carbamidomethyl (K), Carbamidomethyl (M), Carbamidomethyl (N-term), Carbamidomethyl (S), Carbamidomethyl (T), Carbamidomethyl (U), Carbamidomethyl (Y), CarbamidomethylDTT (C), Carbamyl (C), Carbamyl (K), Carbamyl (M), Carbamyl (N-term), Carbamyl (Protein N-term), Carbamyl (R), Carbamyl (S), Carbamyl (T), Carbamyl (Y), Carbofuran (S), Carbonyl (A), Carbonyl (E), Carbonyl (I), Carbonyl (L), Carbonyl (Q), Carbonyl (R), Carbonyl (S), Carbonyl (V), Carboxy (D), Carboxy (E), Carboxy (K), Carboxy (Protein N-term M), Carboxy (W), Carboxy->Thiocarboxy (Protein C-term G), Carboxyethyl (H), Carboxyethyl (K), Carboxyethylpyrrole (K), Carboxymethyl (C), Carboxymethyl (K), Carboxymethyl (N-term), Carboxymethyl (U), Carboxymethyl (W), Carboxymethyl:13C(2) (C), CarboxymethylDMAP (N-term), CarboxymethylDTT (C), Cation:Ag (C-term), Cation:Ag (D), Cation:Ag (E), Cation:Al[III] (C-term), Cation:Al[III] (D), Cation:Al[III] (E), Cation:Ca[II] (C-term), Cation:Ca[II] (D), Cation:Ca[II] (E), Cation:Cu[I] (C-term), Cation:Cu[I] (D), Cation:Cu[I] (E), Cation:Cu[I] (H), Cation:Fe[II] (C-term), Cation:Fe[II] (D), Cation:Fe[II] (E), Cation:Fe[III] (C-term), Cation:Fe[III] (D), Cation:Fe[III] (E), Cation:K (C-term), Cation:K (D), Cation:K (E), Cation:Li (C-term), Cation:Li (D), Cation:Li (E), Cation:Mg[II] (C-term), Cation:Mg[II] (D), Cation:Mg[II] (E), Cation:Na (C-term), Cation:Na (D), Cation:Na (E), Cation:Ni[II] (C-term), Cation:Ni[II] (D), Cation:Ni[II] (E), Cation:Zn[II] (C-term), Cation:Zn[II] (D), Cation:Zn[II] (E), Cation:Zn[II] (H), cGMP (C), cGMP (S), cGMP+RMP-loss (C), cGMP+RMP-loss (S), CHDH (D), Chlorination (W), Chlorination (Y), Cholesterol (Protein C-term), CIGG (K), CLIP_TRAQ_2 (K), CLIP_TRAQ_2 (N-term), CLIP_TRAQ_2 (Y), CLIP_TRAQ_3 (K), CLIP_TRAQ_3 (N-term), CLIP_TRAQ_3 (Y), CLIP_TRAQ_4 (K), CLIP_TRAQ_4 (N-term), CLIP_TRAQ_4 (Y), CoenzymeA (C), Cresylphosphate (H), Cresylphosphate (K), Cresylphosphate (R), Cresylphosphate (S), Cresylphosphate (T), Cresylphosphate (Y), CresylSaligeninPhosphate (H), CresylSaligeninPhosphate (K), CresylSaligeninPhosphate (R), CresylSaligeninPhosphate (S), CresylSaligeninPhosphate (T), CresylSaligeninPhosphate (Y), Crotonaldehyde (C), Crotonaldehyde (H), Crotonaldehyde (K), Crotonyl (K), CuSMo (C), CUSTOM0 (A), CUSTOM0 (C), CUSTOM0 (C-term), CUSTOM0 (D), CUSTOM0 (E), CUSTOM0 (F), CUSTOM0 (G), CUSTOM0 (H), CUSTOM0 (I), CUSTOM0 (K), CUSTOM0 (L), CUSTOM0 (M), CUSTOM0 (N), CUSTOM0 (N-term), CUSTOM0 (P), CUSTOM0 (Q), CUSTOM0 (R), CUSTOM0 (S), CUSTOM0 (T), CUSTOM0 (V), CUSTOM0 (W), CUSTOM0 (Y), CUSTOM1 (A), CUSTOM1 (C), CUSTOM1 (C-term), CUSTOM1 (D), CUSTOM1 (E), CUSTOM1 (F), CUSTOM1 (G), CUSTOM1 (H), CUSTOM1 (I), CUSTOM1 (K), CUSTOM1 (L), CUSTOM1 (M), CUSTOM1 (N), CUSTOM1 (N-term), CUSTOM1 (P), CUSTOM1 (Q), CUSTOM1 (R), CUSTOM1 (S), CUSTOM1 (T), CUSTOM1 (V), CUSTOM1 (W), CUSTOM1 (Y), CUSTOM2 (A), CUSTOM2 (C), CUSTOM2 (C-term), CUSTOM2 (D), CUSTOM2 (E), CUSTOM2 (F), CUSTOM2 (G), CUSTOM2 (H), CUSTOM2 (I), CUSTOM2 (K), CUSTOM2 (L), CUSTOM2 (M), CUSTOM2 (N), CUSTOM2 (N-term), CUSTOM2 (P), CUSTOM2 (Q), CUSTOM2 (R), CUSTOM2 (S), CUSTOM2 (T), CUSTOM2 (V), CUSTOM2 (W), CUSTOM2 (Y), CUSTOM3 (A), CUSTOM3 (C), CUSTOM3 (C-term), CUSTOM3 (D), CUSTOM3 (E), CUSTOM3 (F), CUSTOM3 (G), CUSTOM3 (H), CUSTOM3 (I), CUSTOM3 (K), CUSTOM3 (L), CUSTOM3 (M), CUSTOM3 (N), CUSTOM3 (N-term), CUSTOM3 (P), CUSTOM3 (Q), CUSTOM3 (R), CUSTOM3 (S), CUSTOM3 (T), CUSTOM3 (V), CUSTOM3 (W), CUSTOM3 (Y), CUSTOM4 (A), CUSTOM4 (C), CUSTOM4 (C-term), CUSTOM4 (D), CUSTOM4 (E), CUSTOM4 (F), CUSTOM4 (G), CUSTOM4 (H), CUSTOM4 (I), CUSTOM4 (K), CUSTOM4 (L), CUSTOM4 (M), CUSTOM4 (N), CUSTOM4 (N-term), CUSTOM4 (P), CUSTOM4 (Q), CUSTOM4 (R), CUSTOM4 (S), CUSTOM4 (T), CUSTOM4 (V), CUSTOM4 (W), CUSTOM4 (Y), CUSTOM5 (A), CUSTOM5 (C), CUSTOM5 (C-term), CUSTOM5 (D), CUSTOM5 (E), CUSTOM5 (F), CUSTOM5 (G), CUSTOM5 (H), CUSTOM5 (I), CUSTOM5 (K), CUSTOM5 (L), CUSTOM5 (M), CUSTOM5 (N), CUSTOM5 (N-term), CUSTOM5 (P), CUSTOM5 (Q), CUSTOM5 (R), CUSTOM5 (S), CUSTOM5 (T), CUSTOM5 (V), CUSTOM5 (W), CUSTOM5 (Y), CUSTOM6 (A), CUSTOM6 (C), CUSTOM6 (C-term), CUSTOM6 (D), CUSTOM6 (E), CUSTOM6 (F), CUSTOM6 (G), CUSTOM6 (H), CUSTOM6 (I), CUSTOM6 (K), CUSTOM6 (L), CUSTOM6 (M), CUSTOM6 (N), CUSTOM6 (N-term), CUSTOM6 (P), CUSTOM6 (Q), CUSTOM6 (R), CUSTOM6 (S), CUSTOM6 (T), CUSTOM6 (V), CUSTOM6 (W), CUSTOM6 (Y), CUSTOM7 (A), CUSTOM7 (C), CUSTOM7 (C-term), CUSTOM7 (D), CUSTOM7 (E), CUSTOM7 (F), CUSTOM7 (G), CUSTOM7 (H), CUSTOM7 (I), CUSTOM7 (K), CUSTOM7 (L), CUSTOM7 (M), CUSTOM7 (N), CUSTOM7 (N-term), CUSTOM7 (P), CUSTOM7 (Q), CUSTOM7 (R), CUSTOM7 (S), CUSTOM7 (T), CUSTOM7 (V), CUSTOM7 (W), CUSTOM7 (Y), CUSTOM8 (A), CUSTOM8 (C), CUSTOM8 (C-term), CUSTOM8 (D), CUSTOM8 (E), CUSTOM8 (F), CUSTOM8 (G), CUSTOM8 (H), CUSTOM8 (I), CUSTOM8 (K), CUSTOM8 (L), CUSTOM8 (M), CUSTOM8 (N), CUSTOM8 (N-term), CUSTOM8 (P), CUSTOM8 (Q), CUSTOM8 (R), CUSTOM8 (S), CUSTOM8 (T), CUSTOM8 (V), CUSTOM8 (W), CUSTOM8 (Y), CUSTOM9 (A), CUSTOM9 (C), CUSTOM9 (C-term), CUSTOM9 (D), CUSTOM9 (E), CUSTOM9 (F), CUSTOM9 (G), CUSTOM9 (H), CUSTOM9 (I), CUSTOM9 (K), CUSTOM9 (L), CUSTOM9 (M), CUSTOM9 (N), CUSTOM9 (N-term), CUSTOM9 (P), CUSTOM9 (Q), CUSTOM9 (R), CUSTOM9 (S), CUSTOM9 (T), CUSTOM9 (V), CUSTOM9 (W), CUSTOM9 (Y), Cy3-maleimide (C), Cy3b-maleimide (C), Cyano (C), CyDye-Cy3 (C), CyDye-Cy5 (C), Cys->Ala (C), Cys->Arg (C), Cys->Asn (C), Cys->Asp (C), Cys->CamSec (C), Cys->Dha (C), Cys->ethylaminoAla (C), Cys->Gln (C), Cys->Glu (C), Cys->Gly (C), Cys->His (C), Cys->Lys (C), Cys->Met (C), Cys->methylaminoAla (C), Cys->Oxoalanine (C), Cys->Phe (C), Cys->Pro (C), Cys->PyruvicAcid (Protein N-term C), Cys->SecNEM (C), Cys->SecNEM:2H(5) (C), Cys->Ser (C), Cys->Thr (C), Cys->Trp (C), Cys->Tyr (C), Cys->Val (C), Cys->Xle (C), Cysteinyl (C), cysTMT (C), cysTMT6plex (C), Cytopiloyne (C), Cytopiloyne (K), Cytopiloyne (N-term), Cytopiloyne (P), Cytopiloyne (R), Cytopiloyne (S), Cytopiloyne (Y), Cytopiloyne+water (C), Cytopiloyne+water (K), Cytopiloyne+water (N-term), Cytopiloyne+water (R), Cytopiloyne+water (S), Cytopiloyne+water (T), Cytopiloyne+water (Y), DABCYL-C2-maleimide (C), DABCYL-C2-maleimide (K), DAET (S), DAET (T), Dansyl (K), Dansyl (N-term), Dap-DSP (A), Dap-DSP (E), Dap-DSP (K), DBIA (C), DCP (C), Deamidated (N), Deamidated (Protein N-term F), Deamidated (Q), Deamidated (R), Deamidated:18O(1) (N), Deamidated:18O(1) (Q), Decanoyl (S), Decanoyl (T), Decarboxylation (D), Decarboxylation (E), DEDGFLYMVYASQETFG (K), Dehydrated (D), Dehydrated (N-term C), Dehydrated (Protein C-term N), Dehydrated (Protein C-term Q), Dehydrated (S), Dehydrated (T), Dehydrated (Y), Dehydro (C), Delta:H(-1)N(-1)18O(1) (N), Delta:H(-4)O(2) (W), Delta:H(-4)O(3) (W), Delta:H(10)C(8)O(1) (K), Delta:H(2)C(2) (H), Delta:H(2)C(2) (K), Delta:H(2)C(2) (N-term), Delta:H(2)C(2) (Protein N-term), Delta:H(2)C(3) (K), Delta:H(2)C(3)O(1) (K), Delta:H(2)C(3)O(1) (R), Delta:H(2)C(5) (K), Delta:H(4)C(2) (H), Delta:H(4)C(2) (K), Delta:H(4)C(2) (N-term), Delta:H(4)C(2)O(-1)S(1) (S), Delta:H(4)C(3) (H), Delta:H(4)C(3) (K), Delta:H(4)C(3) (Protein N-term), Delta:H(4)C(3)O(1) (C), Delta:H(4)C(3)O(1) (H), Delta:H(4)C(3)O(1) (K), Delta:H(4)C(3)O(1) (R), Delta:H(4)C(3)O(2) (K), Delta:H(4)C(5)O(1) (R), Delta:H(4)C(6) (K), Delta:H(5)C(2) (P), Delta:H(6)C(3)O(1) (C), Delta:H(6)C(3)O(1) (H), Delta:H(6)C(3)O(1) (K), Delta:H(6)C(3)O(1) (Protein N-term), Delta:H(6)C(6)O(1) (K), Delta:H(6)C(7)O(4) (R), Delta:H(8)C(6)O(1) (K), Delta:H(8)C(6)O(1) (Protein N-term), Delta:H(8)C(6)O(2) (K), Delta:Hg(1) (C), Delta:O(4) (W), Delta:S(-1)Se(1) (C), Delta:S(-1)Se(1) (M), Delta:Se(1) (C), Deoxy (D), Deoxy (S), Deoxy (T), Deoxyhypusine (K), Deoxyhypusine (Q), DeStreak (C), Dethiomethyl (M), dHex (N), dHex (S), dHex (T), dHex(1)Hex(1) (S), dHex(1)Hex(1) (T), dHex(1)Hex(1)HexA(1)HexNAc(3) (S), dHex(1)Hex(1)HexA(1)HexNAc(3) (T), dHex(1)Hex(1)HexNAc(1)Kdn(1) (S), dHex(1)Hex(1)HexNAc(1)Kdn(1) (T), dHex(1)Hex(1)HexNAc(1)NeuAc(1) (S), dHex(1)Hex(1)HexNAc(1)NeuAc(1) (T), dHex(1)Hex(1)HexNAc(1)NeuGc(1) (S), dHex(1)Hex(1)HexNAc(1)NeuGc(1) (T), dHex(1)Hex(1)HexNAc(2)Kdn(1) (S), dHex(1)Hex(1)HexNAc(2)Kdn(1) (T), dHex(1)Hex(1)HexNAc(2)NeuAc(1) (S), dHex(1)Hex(1)HexNAc(2)NeuAc(1) (T), dHex(1)Hex(1)HexNAc(2)NeuAc(1)Sulf(1) (S), dHex(1)Hex(1)HexNAc(2)NeuAc(1)Sulf(1) (T), dHex(1)Hex(1)HexNAc(2)NeuAc(2) (S), dHex(1)Hex(1)HexNAc(2)NeuAc(2) (T), dHex(1)Hex(1)HexNAc(2)Sulf(1) (S), dHex(1)Hex(1)HexNAc(2)Sulf(1) (T), dHex(1)Hex(1)HexNAc(3) (S), dHex(1)Hex(1)HexNAc(3) (T), dHex(1)Hex(1)HexNAc(3)NeuAc(1) (S), dHex(1)Hex(1)HexNAc(3)NeuAc(1) (T), dHex(1)Hex(1)HexNAc(3)NeuAc(1)Sulf(1) (S), dHex(1)Hex(1)HexNAc(3)NeuAc(1)Sulf(1) (T), dHex(1)Hex(1)HexNAc(3)NeuGc(1) (S), dHex(1)Hex(1)HexNAc(3)NeuGc(1) (T), dHex(1)Hex(1)HexNAc(3)Sulf(1) (S), dHex(1)Hex(1)HexNAc(3)Sulf(1) (T), dHex(1)Hex(1)HexNAc(4) (S), dHex(1)Hex(1)HexNAc(4) (T), dHex(1)Hex(2) (S), dHex(1)Hex(2) (T), dHex(1)Hex(2)HexA(1) (S), dHex(1)Hex(2)HexA(1) (T), dHex(1)Hex(2)HexA(1)HexNAc(1) (S), dHex(1)Hex(2)HexA(1)HexNAc(1) (T), dHex(1)Hex(2)HexA(1)HexNAc(1)Sulf(1) (S), dHex(1)Hex(2)HexA(1)HexNAc(1)Sulf(1) (T), dHex(1)Hex(2)HexA(1)HexNAc(2) (S), dHex(1)Hex(2)HexA(1)HexNAc(2) (T), dHex(1)Hex(2)HexNAc(1) (S), dHex(1)Hex(2)HexNAc(1) (T), dHex(1)Hex(2)HexNAc(1)NeuAc(2) (S), dHex(1)Hex(2)HexNAc(1)NeuAc(2) (T), dHex(1)Hex(2)HexNAc(1)Sulf(1) (S), dHex(1)Hex(2)HexNAc(1)Sulf(1) (T), dHex(1)Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (S), dHex(1)Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (T), dHex(1)Hex(2)HexNAc(2)NeuAc(2) (S), dHex(1)Hex(2)HexNAc(2)NeuAc(2) (T), dHex(1)Hex(2)HexNAc(2)NeuAc(2)Sulf(1) (S), dHex(1)Hex(2)HexNAc(2)NeuAc(2)Sulf(1) (T), dHex(1)Hex(2)HexNAc(2)NeuGc(1) (N), dHex(1)Hex(2)HexNAc(2)NeuGc(1) (S), dHex(1)Hex(2)HexNAc(2)NeuGc(1) (T), dHex(1)Hex(2)HexNAc(2)NeuGc(2) (S), dHex(1)Hex(2)HexNAc(2)NeuGc(2) (T), dHex(1)Hex(2)HexNAc(2)NeuGc(3) (S), dHex(1)Hex(2)HexNAc(2)NeuGc(3) (T), dHex(1)Hex(2)HexNAc(2)Pent(1) (N), dHex(1)Hex(2)HexNAc(2)Sulf(1) (S), dHex(1)Hex(2)HexNAc(2)Sulf(1) (T), dHex(1)Hex(2)HexNAc(3) (N), dHex(1)Hex(2)HexNAc(3) (S), dHex(1)Hex(2)HexNAc(3) (T), dHex(1)Hex(2)HexNAc(3)NeuAc(1) (S), dHex(1)Hex(2)HexNAc(3)NeuAc(1) (T), dHex(1)Hex(2)HexNAc(3)NeuAc(1)Sulf(1) (S), dHex(1)Hex(2)HexNAc(3)NeuAc(1)Sulf(1) (T), dHex(1)Hex(2)HexNAc(3)Sulf(1) (S), dHex(1)Hex(2)HexNAc(3)Sulf(1) (T), dHex(1)Hex(2)HexNAc(4) (N), dHex(1)Hex(2)HexNAc(4) (S), dHex(1)Hex(2)HexNAc(4) (T), dHex(1)Hex(2)HexNAc(4)NeuAc(1) (S), dHex(1)Hex(2)HexNAc(4)NeuAc(1) (T), dHex(1)Hex(2)HexNAc(4)NeuAc(2) (S), dHex(1)Hex(2)HexNAc(4)NeuAc(2) (T), dHex(1)Hex(2)HexNAc(4)Sulf(2) (S), dHex(1)Hex(2)HexNAc(4)Sulf(2) (T), dHex(1)Hex(3) (S), dHex(1)Hex(3) (T), dHex(1)Hex(3)HexA(1)HexNAc(1) (S), dHex(1)Hex(3)HexA(1)HexNAc(1) (T), dHex(1)Hex(3)HexA(1)HexNAc(1)Sulf(1) (S), dHex(1)Hex(3)HexA(1)HexNAc(1)Sulf(1) (T), dHex(1)Hex(3)HexA(1)HexNAc(2) (S), dHex(1)Hex(3)HexA(1)HexNAc(2) (T), dHex(1)Hex(3)HexA(1)HexNAc(2)Sulf(1) (S), dHex(1)Hex(3)HexA(1)HexNAc(2)Sulf(1) (T), dHex(1)Hex(3)HexA(1)HexNAc(3)Sulf(1) (S), dHex(1)Hex(3)HexA(1)HexNAc(3)Sulf(1) (T), dHex(1)Hex(3)HexA(2)HexNAc(2) (S), dHex(1)Hex(3)HexA(2)HexNAc(2) (T), dHex(1)Hex(3)HexNAc(1) (S), dHex(1)Hex(3)HexNAc(1) (T), dHex(1)Hex(3)HexNAc(1)Sulf(1) (S), dHex(1)Hex(3)HexNAc(1)Sulf(1) (T), dHex(1)Hex(3)HexNAc(2) (N), dHex(1)Hex(3)HexNAc(2) (S), dHex(1)Hex(3)HexNAc(2) (T), dHex(1)Hex(3)HexNAc(2)NeuGc(1) (S), dHex(1)Hex(3)HexNAc(2)NeuGc(1) (T), dHex(1)Hex(3)HexNAc(2)Pent(1) (N), dHex(1)Hex(3)HexNAc(2)Sulf(1) (N), dHex(1)Hex(3)HexNAc(2)Sulf(1) (S), dHex(1)Hex(3)HexNAc(2)Sulf(1) (T), dHex(1)Hex(3)HexNAc(3) (N), dHex(1)Hex(3)HexNAc(3) (S), dHex(1)Hex(3)HexNAc(3) (T), dHex(1)Hex(3)HexNAc(3)NeuAc(2) (S), dHex(1)Hex(3)HexNAc(3)NeuAc(2) (T), dHex(1)Hex(3)HexNAc(3)Pent(1) (N), dHex(1)Hex(3)HexNAc(3)Pent(2) (N), dHex(1)Hex(3)HexNAc(3)Pent(3) (N), dHex(1)Hex(3)HexNAc(3)Sulf(1) (S), dHex(1)Hex(3)HexNAc(3)Sulf(1) (T), dHex(1)Hex(3)HexNAc(4) (N), dHex(1)Hex(3)HexNAc(4) (S), dHex(1)Hex(3)HexNAc(4) (T), dHex(1)Hex(3)HexNAc(4)NeuAc(1) (N), dHex(1)Hex(3)HexNAc(4)Pent(1) (N), dHex(1)Hex(3)HexNAc(4)Pent(2) (N), dHex(1)Hex(3)HexNAc(4)Pent(3) (N), dHex(1)Hex(3)HexNAc(4)Sulf(1) (N), dHex(1)Hex(3)HexNAc(5) (N), dHex(1)Hex(3)HexNAc(5) (S), dHex(1)Hex(3)HexNAc(5) (T), dHex(1)Hex(3)HexNAc(5)NeuAc(1) (N), dHex(1)Hex(3)HexNAc(5)NeuAc(1) (S), dHex(1)Hex(3)HexNAc(5)NeuAc(1) (T), dHex(1)Hex(3)HexNAc(5)Sulf(1) (N), dHex(1)Hex(3)HexNAc(6) (N), dHex(1)Hex(3)HexNAc(6) (S), dHex(1)Hex(3)HexNAc(6) (T), dHex(1)Hex(3)HexNAc(6)Sulf(1) (N), dHex(1)Hex(4) (S), dHex(1)Hex(4) (T), dHex(1)Hex(4)HexA(1) (S), dHex(1)Hex(4)HexA(1) (T), dHex(1)Hex(4)HexA(1)HexNAc(2) (S), dHex(1)Hex(4)HexA(1)HexNAc(2) (T), dHex(1)Hex(4)HexA(1)HexNAc(3)Sulf(1) (S), dHex(1)Hex(4)HexA(1)HexNAc(3)Sulf(1) (T), dHex(1)Hex(4)HexNAc(1)Pent(1) (N), dHex(1)Hex(4)HexNAc(2) (N), dHex(1)Hex(4)HexNAc(2) (S), dHex(1)Hex(4)HexNAc(2) (T), dHex(1)Hex(4)HexNAc(2)Pent(1) (N), dHex(1)Hex(4)HexNAc(3) (N), dHex(1)Hex(4)HexNAc(3)NeuAc(1) (N), dHex(1)Hex(4)HexNAc(3)NeuAc(1) (S), dHex(1)Hex(4)HexNAc(3)NeuAc(1) (T), dHex(1)Hex(4)HexNAc(3)NeuAc(1)Sulf(1) (N), dHex(1)Hex(4)HexNAc(3)NeuGc(1) (N), dHex(1)Hex(4)HexNAc(3)Pent(1) (N), dHex(1)Hex(4)HexNAc(3)Sulf(1) (N), dHex(1)Hex(4)HexNAc(4) (N), dHex(1)Hex(4)HexNAc(4) (S), dHex(1)Hex(4)HexNAc(4) (T), dHex(1)Hex(4)HexNAc(4)NeuAc(1) (N), dHex(1)Hex(4)HexNAc(4)NeuAc(1) (S), dHex(1)Hex(4)HexNAc(4)NeuAc(1) (T), dHex(1)Hex(4)HexNAc(4)NeuAc(1)Sulf(1) (N), dHex(1)Hex(4)HexNAc(4)Pent(1) (N), dHex(1)Hex(4)HexNAc(4)Sulf(1) (N), dHex(1)Hex(4)HexNAc(5) (N), dHex(1)Hex(4)HexNAc(5)Sulf(1) (N), dHex(1)Hex(5) (S), dHex(1)Hex(5) (T), dHex(1)Hex(5)HexA(1)HexNAc(3)Sulf(1) (N), dHex(1)Hex(5)HexA(1)HexNAc(3)Sulf(2) (N), dHex(1)Hex(5)HexNAc(2) (N), dHex(1)Hex(5)HexNAc(2)Pent(1) (N), dHex(1)Hex(5)HexNAc(3) (N), dHex(1)Hex(5)HexNAc(3)NeuAc(1) (N), dHex(1)Hex(5)HexNAc(3)NeuAc(1)Sulf(1) (N), dHex(1)Hex(5)HexNAc(3)NeuGc(1) (N), dHex(1)Hex(5)HexNAc(3)NeuGc(1)Sulf(1) (N), dHex(1)Hex(5)HexNAc(3)Sulf(1) (N), dHex(1)Hex(5)HexNAc(4) (N), dHex(1)Hex(5)HexNAc(4)Me(2)Pent(1) (N), dHex(1)Hex(5)HexNAc(4)NeuAc(1) (N), dHex(1)Hex(5)HexNAc(4)NeuAc(2) (N), dHex(1)Hex(5)HexNAc(4)Pent(1) (N), dHex(1)Hex(5)HexNAc(4)Sulf(1) (N), dHex(1)Hex(5)HexNAc(4)Sulf(2) (N), dHex(1)Hex(5)HexNAc(5) (N), dHex(1)Hex(6) (S), dHex(1)Hex(6) (T), dHex(1)Hex(6)HexNAc(2) (N), dHex(1)Hex(6)HexNAc(3) (N), dHex(1)Hex(6)HexNAc(3)Sulf(1) (N), dHex(1)Hex(6)HexNAc(4) (N), dHex(1)Hex(7)HexNAc(2) (N), dHex(1)Hex(7)HexNAc(3) (N), dHex(1)Hex(7)HexNAc(3)Phos(1) (N), dHex(1)Hex(7)HexNAc(3)Sulf(1) (N), dHex(1)Hex(7)HexNAc(4) (N), dHex(1)Hex(8)HexNAc(2) (N), dHex(1)HexNAc(3) (S), dHex(1)HexNAc(3) (T), dHex(1)HexNAc(4) (S), dHex(1)HexNAc(4) (T), dHex(1)HexNAc(5) (S), dHex(1)HexNAc(5) (T), dHex(2)Hex(1)HexNAc(1)Kdn(1) (S), dHex(2)Hex(1)HexNAc(1)Kdn(1) (T), dHex(2)Hex(1)HexNAc(2)Kdn(1) (S), dHex(2)Hex(1)HexNAc(2)Kdn(1) (T), dHex(2)Hex(1)HexNAc(2)NeuAc(1) (S), dHex(2)Hex(1)HexNAc(2)NeuAc(1) (T), dHex(2)Hex(1)HexNAc(2)NeuGc(1) (S), dHex(2)Hex(1)HexNAc(2)NeuGc(1) (T), dHex(2)Hex(1)HexNAc(3) (S), dHex(2)Hex(1)HexNAc(3) (T), dHex(2)Hex(1)HexNAc(4)Sulf(1) (S), dHex(2)Hex(1)HexNAc(4)Sulf(1) (T), dHex(2)Hex(2) (S), dHex(2)Hex(2) (T), dHex(2)Hex(2)HexA(1) (S), dHex(2)Hex(2)HexA(1) (T), dHex(2)Hex(2)HexA(1)HexNAc(1) (S), dHex(2)Hex(2)HexA(1)HexNAc(1) (T), dHex(2)Hex(2)HexA(1)HexNAc(2)Sulf(1) (S), dHex(2)Hex(2)HexA(1)HexNAc(2)Sulf(1) (T), dHex(2)Hex(2)HexNAc(1) (S), dHex(2)Hex(2)HexNAc(1) (T), dHex(2)Hex(2)HexNAc(2) (N), dHex(2)Hex(2)HexNAc(2) (S), dHex(2)Hex(2)HexNAc(2) (T), dHex(2)Hex(2)HexNAc(2)Kdn(1) (S), dHex(2)Hex(2)HexNAc(2)Kdn(1) (T), dHex(2)Hex(2)HexNAc(2)NeuAc(1) (S), dHex(2)Hex(2)HexNAc(2)NeuAc(1) (T), dHex(2)Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (S), dHex(2)Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (T), dHex(2)Hex(2)HexNAc(2)NeuGc(1) (S), dHex(2)Hex(2)HexNAc(2)NeuGc(1) (T), dHex(2)Hex(2)HexNAc(2)Sulf(1) (S), dHex(2)Hex(2)HexNAc(2)Sulf(1) (T), dHex(2)Hex(2)HexNAc(2)Sulf(2) (S), dHex(2)Hex(2)HexNAc(2)Sulf(2) (T), dHex(2)Hex(2)HexNAc(3) (N), dHex(2)Hex(2)HexNAc(3) (S), dHex(2)Hex(2)HexNAc(3) (T), dHex(2)Hex(2)HexNAc(3)NeuAc(1) (S), dHex(2)Hex(2)HexNAc(3)NeuAc(1) (T), dHex(2)Hex(2)HexNAc(3)NeuGc(1) (S), dHex(2)Hex(2)HexNAc(3)NeuGc(1) (T), dHex(2)Hex(2)HexNAc(3)Sulf(1) (S), dHex(2)Hex(2)HexNAc(3)Sulf(1) (T), dHex(2)Hex(2)HexNAc(4) (S), dHex(2)Hex(2)HexNAc(4) (T), dHex(2)Hex(2)HexNAc(4)Sulf(2) (S), dHex(2)Hex(2)HexNAc(4)Sulf(2) (T), dHex(2)Hex(2)HexNAc(5) (S), dHex(2)Hex(2)HexNAc(5) (T), dHex(2)Hex(2)HexNAc(6)Sulf(1) (S), dHex(2)Hex(2)HexNAc(6)Sulf(1) (T), dHex(2)Hex(3) (S), dHex(2)Hex(3) (T), dHex(2)Hex(3)HexA(1)HexNAc(1)Sulf(1) (S), dHex(2)Hex(3)HexA(1)HexNAc(1)Sulf(1) (T), dHex(2)Hex(3)HexA(1)HexNAc(2)Sulf(1) (S), dHex(2)Hex(3)HexA(1)HexNAc(2)Sulf(1) (T), dHex(2)Hex(3)HexA(1)HexNAc(3)Sulf(1) (S), dHex(2)Hex(3)HexA(1)HexNAc(3)Sulf(1) (T), dHex(2)Hex(3)HexNAc(1)Sulf(1) (S), dHex(2)Hex(3)HexNAc(1)Sulf(1) (T), dHex(2)Hex(3)HexNAc(2) (N), dHex(2)Hex(3)HexNAc(2) (S), dHex(2)Hex(3)HexNAc(2) (T), dHex(2)Hex(3)HexNAc(2)NeuGc(1) (S), dHex(2)Hex(3)HexNAc(2)NeuGc(1) (T), dHex(2)Hex(3)HexNAc(2)Sulf(1) (S), dHex(2)Hex(3)HexNAc(2)Sulf(1) (T), dHex(2)Hex(3)HexNAc(3) (N), dHex(2)Hex(3)HexNAc(3) (S), dHex(2)Hex(3)HexNAc(3) (T), dHex(2)Hex(3)HexNAc(3)NeuAc(1) (S), dHex(2)Hex(3)HexNAc(3)NeuAc(1) (T), dHex(2)Hex(3)HexNAc(3)NeuAc(2) (S), dHex(2)Hex(3)HexNAc(3)NeuAc(2) (T), dHex(2)Hex(3)HexNAc(3)Pent(1) (N), dHex(2)Hex(3)HexNAc(3)Pent(2) (N), dHex(2)Hex(3)HexNAc(3)Sulf(1) (S), dHex(2)Hex(3)HexNAc(3)Sulf(1) (T), dHex(2)Hex(3)HexNAc(4) (N), dHex(2)Hex(3)HexNAc(4) (S), dHex(2)Hex(3)HexNAc(4) (T), dHex(2)Hex(3)HexNAc(4)NeuAc(1) (N), dHex(2)Hex(3)HexNAc(4)Pent(1) (N), dHex(2)Hex(3)HexNAc(4)Pent(2) (N), dHex(2)Hex(3)HexNAc(5) (N), dHex(2)Hex(3)HexNAc(5) (S), dHex(2)Hex(3)HexNAc(5) (T), dHex(2)Hex(3)HexNAc(6) (N), dHex(2)Hex(4) (S), dHex(2)Hex(4) (T), dHex(2)Hex(4)HexA(1)HexNAc(3)Sulf(1) (S), dHex(2)Hex(4)HexA(1)HexNAc(3)Sulf(1) (T), dHex(2)Hex(4)HexNAc(1) (S), dHex(2)Hex(4)HexNAc(1) (T), dHex(2)Hex(4)HexNAc(2) (N), dHex(2)Hex(4)HexNAc(2) (S), dHex(2)Hex(4)HexNAc(2) (T), dHex(2)Hex(4)HexNAc(3) (N), dHex(2)Hex(4)HexNAc(3)NeuAc(1)Sulf(1) (N), dHex(2)Hex(4)HexNAc(3)Pent(1) (N), dHex(2)Hex(4)HexNAc(4) (N), dHex(2)Hex(4)HexNAc(4) (S), dHex(2)Hex(4)HexNAc(4) (T), dHex(2)Hex(4)HexNAc(4)Pent(1) (N), dHex(2)Hex(4)HexNAc(4)Sulf(1) (N), dHex(2)Hex(4)HexNAc(5) (N), dHex(2)Hex(4)HexNAc(5) (S), dHex(2)Hex(4)HexNAc(5) (T), dHex(2)Hex(5)HexNAc(2)Me(1) (S), dHex(2)Hex(5)HexNAc(2)Me(1) (T), dHex(2)Hex(5)HexNAc(3)Pent(1) (N), dHex(2)Hex(5)HexNAc(4) (N), dHex(2)HexNAc(2)Kdn(1) (S), dHex(2)HexNAc(2)Kdn(1) (T), dHex(2)HexNAc(5) (S), dHex(2)HexNAc(5) (T), dHex(2)HexNAc(7) (S), dHex(2)HexNAc(7) (T), dHex(3)Hex(1)HexNAc(2)Kdn(1) (S), dHex(3)Hex(1)HexNAc(2)Kdn(1) (T), dHex(3)Hex(1)HexNAc(3)Kdn(1) (S), dHex(3)Hex(1)HexNAc(3)Kdn(1) (T), dHex(3)Hex(2)HexA(1)HexNAc(2)Sulf(1) (S), dHex(3)Hex(2)HexA(1)HexNAc(2)Sulf(1) (T), dHex(3)Hex(2)HexNAc(2) (S), dHex(3)Hex(2)HexNAc(2) (T), dHex(3)Hex(2)HexNAc(2)Kdn(1) (S), dHex(3)Hex(2)HexNAc(2)Kdn(1) (T), dHex(3)Hex(2)HexNAc(3) (S), dHex(3)Hex(2)HexNAc(3) (T), dHex(3)Hex(2)HexNAc(3)Kdn(1) (S), dHex(3)Hex(2)HexNAc(3)Kdn(1) (T), dHex(3)Hex(2)HexNAc(4) (S), dHex(3)Hex(2)HexNAc(4) (T), dHex(3)Hex(2)HexNAc(4)Sulf(2) (S), dHex(3)Hex(2)HexNAc(4)Sulf(2) (T), dHex(3)Hex(3)HexNAc(1) (S), dHex(3)Hex(3)HexNAc(1) (T), dHex(3)Hex(3)HexNAc(2) (S), dHex(3)Hex(3)HexNAc(2) (T), dHex(3)Hex(3)HexNAc(3) (S), dHex(3)Hex(3)HexNAc(3) (T), dHex(3)Hex(3)HexNAc(3)NeuAc(1) (S), dHex(3)Hex(3)HexNAc(3)NeuAc(1) (T), dHex(3)Hex(3)HexNAc(3)Pent(1) (N), dHex(3)Hex(3)HexNAc(4) (N), dHex(3)Hex(3)HexNAc(4)Pent(1) (N), dHex(3)Hex(4)HexNAc(4) (N), dHex(3)Hex(4)HexNAc(4) (S), dHex(3)Hex(4)HexNAc(4) (T), dHex(3)Hex(4)HexNAc(4)Sulf(1) (N), dHex(3)HexNAc(3)Kdn(1) (S), dHex(3)HexNAc(3)Kdn(1) (T), dHex(4)Hex(1)HexNAc(1)Kdn(2) (S), dHex(4)Hex(1)HexNAc(1)Kdn(2) (T), dHex(4)Hex(1)HexNAc(2)Kdn(1) (S), dHex(4)Hex(1)HexNAc(2)Kdn(1) (T), dHex(4)Hex(1)HexNAc(3)Kdn(1) (S), dHex(4)Hex(1)HexNAc(3)Kdn(1) (T), dHex(4)Hex(2)HexNAc(2)Kdn(1) (S), dHex(4)Hex(2)HexNAc(2)Kdn(1) (T), dHex(4)Hex(2)HexNAc(3) (S), dHex(4)Hex(2)HexNAc(3) (T), dHex(4)Hex(3)HexNAc(2)NeuAc(1) (S), dHex(4)Hex(3)HexNAc(2)NeuAc(1) (T), dHex(4)Hex(3)HexNAc(3) (S), dHex(4)Hex(3)HexNAc(3) (T), dHex(4)HexNAc(3)Kdn(1) (S), dHex(4)HexNAc(3)Kdn(1) (T), DHP (C), Di_L-Gln_Ngamma-propargyl-L-Gln_desthiobiotin (D), Di_L-Gln_Ngamma-propargyl-L-Gln_desthiobiotin (E), Di_L-Glu_Ngamma-propargyl-L-Gln_desthiobiotin (D), Di_L-Glu_Ngamma-propargyl-L-Gln_desthiobiotin (E), Diacylglycerol (C), DiART6plex (K), DiART6plex (N-term), DiART6plex (Protein N-term), DiART6plex (Y), DiART6plex115 (K), DiART6plex115 (N-term), DiART6plex115 (Protein N-term), DiART6plex115 (Y), DiART6plex116/119 (K), DiART6plex116/119 (N-term), DiART6plex116/119 (Protein N-term), DiART6plex116/119 (Y), DiART6plex117 (K), DiART6plex117 (N-term), DiART6plex117 (Protein N-term), DiART6plex117 (Y), DiART6plex118 (K), DiART6plex118 (N-term), DiART6plex118 (Protein N-term), DiART6plex118 (Y), Dibromo (Y), Dicarbamidomethyl (C), Dicarbamidomethyl (H), Dicarbamidomethyl (K), Dicarbamidomethyl (N-term), Dicarbamidomethyl (R), dichlorination (C), dichlorination (Y), Didehydro (C-term K), Didehydro (S), Didehydro (T), Didehydro (Y), Didehydroretinylidene (K), Diethyl (K), Diethyl (N-term), Diethylphosphate (C), Diethylphosphate (H), Diethylphosphate (K), Diethylphosphate (N-term), Diethylphosphate (S), Diethylphosphate (T), Diethylphosphate (Y), Diethylphosphothione (C), Diethylphosphothione (H), Diethylphosphothione (K), Diethylphosphothione (S), Diethylphosphothione (T), Diethylphosphothione (Y), Difuran (Y), Dihydroxyimidazolidine (R), Diiodo (H), Diiodo (Y), Diironsubcluster (C), Diisopropylphosphate (K), Diisopropylphosphate (N-term), Diisopropylphosphate (S), Diisopropylphosphate (T), Diisopropylphosphate (Y), DiLeu4plex (K), DiLeu4plex (N-term), DiLeu4plex (Y), DiLeu4plex115 (K), DiLeu4plex115 (N-term), DiLeu4plex115 (Y), DiLeu4plex117 (K), DiLeu4plex117 (N-term), DiLeu4plex117 (Y), DiLeu4plex118 (K), DiLeu4plex118 (N-term), DiLeu4plex118 (Y), Dimethyl (K), Dimethyl (N), Dimethyl (N-term), Dimethyl (Protein N-term P), Dimethyl (Protein N-term), Dimethyl (R), Dimethyl:2H(2)13C (K), Dimethyl:2H(2)13C (N), Dimethyl:2H(2)13C (N-term), Dimethyl:2H(2)13C (Protein N-term P), Dimethyl:2H(2)13C (R), Dimethyl:2H(4) (K), Dimethyl:2H(4) (N-term), Dimethyl:2H(4) (Protein N-term), Dimethyl:2H(4) (R), Dimethyl:2H(4)13C(2) (K), Dimethyl:2H(4)13C(2) (N-term), Dimethyl:2H(4)13C(2) (Protein N-term), Dimethyl:2H(4)13C(2) (R), Dimethyl:2H(6) (K), Dimethyl:2H(6) (N-term), Dimethyl:2H(6) (R), Dimethyl:2H(6)13C(2) (K), Dimethyl:2H(6)13C(2) (N-term), Dimethyl:2H(6)13C(2) (Protein N-term), Dimethyl:2H(6)13C(2) (R), DimethylamineGMBS (C), Dimethylaminoethyl (C), DimethylArsino (C), Dimethylphosphothione (C), Dimethylphosphothione (H), Dimethylphosphothione (K), Dimethylphosphothione (S), Dimethylphosphothione (T), Dimethylphosphothione (Y), DimethylpyrroleAdduct (K), Dioxidation (C), Dioxidation (E), Dioxidation (F), Dioxidation (I), Dioxidation (K), Dioxidation (L), Dioxidation (M), Dioxidation (P), Dioxidation (R), Dioxidation (U), Dioxidation (V), Dioxidation (W), Dioxidation (Y), Diphthamide (H), Dipyridyl (C), Dipyrrolylmethanemethyl (C), DMPO (C), DMPO (H), DMPO (Y), DNCB_hapten (C), DNCB_hapten (H), DNCB_hapten (K), DNCB_hapten (Y), dNIC (K), dNIC (N-term), DNPS (C), DNPS (W), DPIA (C), DTT (C), DVFQQQTGG (K), DyLight-maleimide (C), DYn-2 (C), EDEDTIDVFQQQTGG (K), EDT-iodoacetyl-PEO-biotin (S), EDT-iodoacetyl-PEO-biotin (T), EDT-maleimide-PEO-biotin (S), EDT-maleimide-PEO-biotin (T), EEEDVIEVYQEQTGG (K), EGCG1 (C), EGCG2 (C), EHD-diphenylpentanone (C), EHD-diphenylpentanone (M), EQAT (C), EQAT:2H(5) (C), EQIGG (K), ESP (K), ESP (N-term), ESP:2H(10) (K), ESP:2H(10) (N-term), Ethanedithiol (S), Ethanedithiol (T), Ethanolamine (C), Ethanolamine (C-term), Ethanolamine (D), Ethanolamine (E), Ethanolyl (C), Ethanolyl (K), Ethanolyl (R), Ethyl (C-term), Ethyl (D), Ethyl (E), Ethyl (K), Ethyl (N-term), Ethyl (Protein N-term), Ethyl+Deamidated (N), Ethyl+Deamidated (Q), ethylamino (S), ethylamino (T), Ethylphosphate (K), Ethylphosphate (N-term), Ethylphosphate (S), Ethylphosphate (T), Ethylphosphate (Y), ethylsulfonylethyl (C), ethylsulfonylethyl (H), ethylsulfonylethyl (K), Ethynyl (C), ExacTagAmine (K), ExacTagThiol (C), FAD (C), FAD (H), FAD (Y), Farnesyl (C), Fluorescein (C), Fluorescein-tyramine (Y), Fluoro (A), Fluoro (F), Fluoro (W), Fluoro (Y), FMN (S), FMN (T), FMNC (C), FMNH (C), FMNH (H), FNEM (C), Formyl (K), Formyl (N-term), Formyl (Protein N-term), Formyl (S), Formyl (T), Formylasparagine (H), FormylMet (Protein N-term), FP-Biotin (K), FP-Biotin (S), FP-Biotin (T), FP-Biotin (Y), FTC (C), FTC (K), FTC (P), FTC (R), FTC (S), Furan (Y), G-H1 (R), Galactosyl (K), Galactosyl (N-term), GEE (Q), GeranylGeranyl (C), GG (C), GG (K), GG (Protein N-term), GG (S), GG (T), GGQ (K), GIST-Quat (K), GIST-Quat (N-term), GIST-Quat:2H(3) (K), GIST-Quat:2H(3) (N-term), GIST-Quat:2H(6) (K), GIST-Quat:2H(6) (N-term), GIST-Quat:2H(9) (K), GIST-Quat:2H(9) (N-term), Gln->Ala (Q), Gln->Arg (Q), Gln->Asn (Q), Gln->Asp (Q), Gln->Cys (Q), Gln->Glu (Q), Gln->Gly (Q), Gln->His (Q), Gln->Lys (Q), Gln->Met (Q), Gln->Phe (Q), Gln->Pro (Q), Gln->pyro-Glu (N-term Q), Gln->Ser (Q), Gln->Thr (Q), Gln->Trp (Q), Gln->Tyr (Q), Gln->Val (Q), Gln->Xle (Q), Glu (E), Glu (Protein C-term), Glu+O(2) (H), Glu->Ala (E), Glu->Arg (E), Glu->Asn (E), Glu->Asp (E), Glu->Cys (E), Glu->Gln (E), Glu->Gly (E), Glu->His (E), Glu->Lys (E), Glu->Met (E), Glu->Phe (E), Glu->Pro (E), Glu->pyro-Glu (N-term E), Glu->pyro-Glu+Methyl (N-term E), Glu->pyro-Glu+Methyl:2H(2)13C(1) (N-term E), Glu->Ser (E), Glu->Thr (E), Glu->Trp (E), Glu->Tyr (E), Glu->Val (E), Glu->Xle (E), glucosone (R), Glucosylgalactosyl (K), Glucuronyl (Protein N-term), Glucuronyl (S), Glucuronyl (T), GluGlu (E), GluGlu (Protein C-term), GluGluGlu (E), GluGluGlu (Protein C-term), GluGluGluGlu (E), GluGluGluGlu (Protein C-term), Gluratylation (K), Glutathione (C), Gly (K), Gly (S), Gly (T), Gly+O(2) (H), Gly->Ala (G), Gly->Arg (G), Gly->Asn (G), Gly->Asp (G), Gly->Cys (G), Gly->Gln (G), Gly->Glu (G), Gly->His (G), Gly->Lys (G), Gly->Met (G), Gly->Phe (G), Gly->Pro (G), Gly->Ser (G), Gly->Thr (G), Gly->Trp (G), Gly->Tyr (G), Gly->Val (G), Gly->Xle (G), Gly-loss+Amide (C-term G), Glycerophospho (S), Glyceroyl (K), Glyceroyl (Protein N-term), GlycerylPE (E), glycidamide (K), glycidamide (N-term), Glycosyl (P), glyoxalAGE (R), Glyoxylyl (K), GNLLFLACYCIGG (K), GPIanchor (Protein C-term), Guanidinyl (K), Guanidinyl (N-term), Haloxon (C), Haloxon (H), Haloxon (K), Haloxon (S), Haloxon (T), Haloxon (Y), HCysteinyl (C), HCysThiolactone (K), Heme (C), Heme (H), Hep (K), Hep (N), Hep (Q), Hep (R), Hep (S), Hep (T), Hex (C), Hex (K), Hex (N), Hex (N-term), Hex (R), Hex (S), Hex (T), Hex (W), Hex (Y), Hex(1)HexA(1) (S), Hex(1)HexA(1) (T), Hex(1)HexA(1)HexNAc(1) (S), Hex(1)HexA(1)HexNAc(1) (T), Hex(1)HexA(1)HexNAc(2) (S), Hex(1)HexA(1)HexNAc(2) (T), Hex(1)HexNAc(1) (N), Hex(1)HexNAc(1) (S), Hex(1)HexNAc(1) (T), Hex(1)HexNAc(1)dHex(1) (N), Hex(1)HexNAc(1)dHex(1) (S), Hex(1)HexNAc(1)dHex(1) (T), Hex(1)HexNAc(1)dHex(1)Me(1) (S), Hex(1)HexNAc(1)dHex(1)Me(1) (T), Hex(1)HexNAc(1)dHex(1)Me(2) (S), Hex(1)HexNAc(1)dHex(1)Me(2) (T), Hex(1)HexNAc(1)Kdn(1)Sulf(1) (S), Hex(1)HexNAc(1)Kdn(1)Sulf(1) (T), Hex(1)HexNAc(1)NeuAc(1) (N), Hex(1)HexNAc(1)NeuAc(1) (S), Hex(1)HexNAc(1)NeuAc(1) (T), Hex(1)HexNAc(1)NeuAc(1)Ac(1) (S), Hex(1)HexNAc(1)NeuAc(1)Ac(1) (T), Hex(1)HexNAc(1)NeuAc(1)NeuGc(1) (S), Hex(1)HexNAc(1)NeuAc(1)NeuGc(1) (T), Hex(1)HexNAc(1)NeuAc(1)Sulf(1) (S), Hex(1)HexNAc(1)NeuAc(1)Sulf(1) (T), Hex(1)HexNAc(1)NeuAc(2) (N), Hex(1)HexNAc(1)NeuAc(2) (S), Hex(1)HexNAc(1)NeuAc(2) (T), Hex(1)HexNAc(1)NeuAc(2)Ac(1) (S), Hex(1)HexNAc(1)NeuAc(2)Ac(1) (T), Hex(1)HexNAc(1)NeuAc(2)Ac(2) (S), Hex(1)HexNAc(1)NeuAc(2)Ac(2) (T), Hex(1)HexNAc(1)NeuAc(3) (S), Hex(1)HexNAc(1)NeuAc(3) (T), Hex(1)HexNAc(1)NeuGc(1) (S), Hex(1)HexNAc(1)NeuGc(1) (T), Hex(1)HexNAc(1)NeuGc(2) (S), Hex(1)HexNAc(1)NeuGc(2) (T), Hex(1)HexNAc(1)NeuGc(3) (S), Hex(1)HexNAc(1)NeuGc(3) (T), Hex(1)HexNAc(1)NeuGc(4) (S), Hex(1)HexNAc(1)NeuGc(4) (T), Hex(1)HexNAc(1)NeuGc(5) (S), Hex(1)HexNAc(1)NeuGc(5) (T), Hex(1)HexNAc(1)Phos(1) (S), Hex(1)HexNAc(1)Phos(1) (T), Hex(1)HexNAc(1)Sulf(1) (S), Hex(1)HexNAc(1)Sulf(1) (T), Hex(1)HexNAc(2) (N), Hex(1)HexNAc(2) (S), Hex(1)HexNAc(2) (T), Hex(1)HexNAc(2)dHex(1) (N), Hex(1)HexNAc(2)dHex(1) (S), Hex(1)HexNAc(2)dHex(1) (T), Hex(1)HexNAc(2)dHex(1)Pent(1) (N), Hex(1)HexNAc(2)dHex(2) (N), Hex(1)HexNAc(2)dHex(2) (S), Hex(1)HexNAc(2)dHex(2) (T), Hex(1)HexNAc(2)dHex(2)Sulf(1) (S), Hex(1)HexNAc(2)dHex(2)Sulf(1) (T), Hex(1)HexNAc(2)NeuAc(1) (S), Hex(1)HexNAc(2)NeuAc(1) (T), Hex(1)HexNAc(2)NeuAc(1)Sulf(1) (S), Hex(1)HexNAc(2)NeuAc(1)Sulf(1) (T), Hex(1)HexNAc(2)NeuAc(2) (S), Hex(1)HexNAc(2)NeuAc(2) (T), Hex(1)HexNAc(2)NeuAc(2)Sulf(1) (S), Hex(1)HexNAc(2)NeuAc(2)Sulf(1) (T), Hex(1)HexNAc(2)NeuGc(1) (S), Hex(1)HexNAc(2)NeuGc(1) (T), Hex(1)HexNAc(2)Pent(1) (N), Hex(1)HexNAc(2)Sulf(1) (S), Hex(1)HexNAc(2)Sulf(1) (T), Hex(1)HexNAc(3) (S), Hex(1)HexNAc(3) (T), Hex(1)HexNAc(3)NeuAc(1) (S), Hex(1)HexNAc(3)NeuAc(1) (T), Hex(1)HexNAc(3)NeuAc(2) (S), Hex(1)HexNAc(3)NeuAc(2) (T), Hex(1)HexNAc(3)NeuGc(1) (S), Hex(1)HexNAc(3)NeuGc(1) (T), Hex(1)HexNAc(3)Sulf(1) (S), Hex(1)HexNAc(3)Sulf(1) (T), Hex(1)HexNAc(4)dHex(1)Sulf(1) (S), Hex(1)HexNAc(4)dHex(1)Sulf(1) (T), Hex(1)NeuAc(1) (S), Hex(1)NeuAc(1) (T), Hex(1)NeuAc(1)Pent(1) (S), Hex(1)NeuAc(1)Pent(1) (T), Hex(1)NeuGc(1) (S), Hex(1)NeuGc(1) (T), Hex(1)Pent(1) (S), Hex(1)Pent(1) (T), Hex(1)Pent(2) (S), Hex(1)Pent(2) (T), Hex(1)Pent(2)Me(1) (S), Hex(1)Pent(2)Me(1) (T), Hex(1)Pent(3) (S), Hex(1)Pent(3) (T), Hex(1)Pent(3)Me(1) (S), Hex(1)Pent(3)Me(1) (T), Hex(10)HexNAc(1) (N), Hex(10)Phos(3) (S), Hex(10)Phos(3) (T), Hex(2) (K), Hex(2) (R), Hex(2) (S), Hex(2) (T), Hex(2)HexA(1)HexNAc(1)Sulf(1) (S), Hex(2)HexA(1)HexNAc(1)Sulf(1) (T), Hex(2)HexA(1)NeuAc(1)Pent(1)Sulf(1) (S), Hex(2)HexA(1)NeuAc(1)Pent(1)Sulf(1) (T), Hex(2)HexA(1)Pent(1)Sulf(1) (S), Hex(2)HexA(1)Pent(1)Sulf(1) (T), Hex(2)HexNAc(1) (N), Hex(2)HexNAc(1) (S), Hex(2)HexNAc(1) (T), Hex(2)HexNAc(1)Me(1) (S), Hex(2)HexNAc(1)Me(1) (T), Hex(2)HexNAc(1)NeuGc(1) (S), Hex(2)HexNAc(1)NeuGc(1) (T), Hex(2)HexNAc(1)NeuGc(2) (S), Hex(2)HexNAc(1)NeuGc(2) (T), Hex(2)HexNAc(1)NeuGc(3) (S), Hex(2)HexNAc(1)NeuGc(3) (T), Hex(2)HexNAc(1)NeuGc(4) (S), Hex(2)HexNAc(1)NeuGc(4) (T), Hex(2)HexNAc(1)Pent(1)HexA(1) (S), Hex(2)HexNAc(1)Pent(1)HexA(1) (T), Hex(2)HexNAc(1)Sulf(1) (S), Hex(2)HexNAc(1)Sulf(1) (T), Hex(2)HexNAc(2) (N), Hex(2)HexNAc(2) (S), Hex(2)HexNAc(2) (T), Hex(2)HexNAc(2)dHex(1) (N), Hex(2)HexNAc(2)dHex(1) (S), Hex(2)HexNAc(2)dHex(1) (T), Hex(2)HexNAc(2)NeuAc(1) (N), Hex(2)HexNAc(2)NeuAc(1) (S), Hex(2)HexNAc(2)NeuAc(1) (T), Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (S), Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (T), Hex(2)HexNAc(2)NeuAc(2) (S), Hex(2)HexNAc(2)NeuAc(2) (T), Hex(2)HexNAc(2)NeuAc(2)Sulf(1) (S), Hex(2)HexNAc(2)NeuAc(2)Sulf(1) (T), Hex(2)HexNAc(2)NeuGc(1) (S), Hex(2)HexNAc(2)NeuGc(1) (T), Hex(2)HexNAc(2)Pent(1) (N), Hex(2)HexNAc(2)Sulf(1) (S), Hex(2)HexNAc(2)Sulf(1) (T), Hex(2)HexNAc(3) (N), Hex(2)HexNAc(3) (S), Hex(2)HexNAc(3) (T), Hex(2)HexNAc(3)NeuAc(1)NeuGc(1) (S), Hex(2)HexNAc(3)NeuAc(1)NeuGc(1) (T), Hex(2)HexNAc(3)NeuAc(1)Sulf(1) (S), Hex(2)HexNAc(3)NeuAc(1)Sulf(1) (T), Hex(2)HexNAc(3)NeuAc(2) (S), Hex(2)HexNAc(3)NeuAc(2) (T), Hex(2)HexNAc(3)NeuAc(3) (S), Hex(2)HexNAc(3)NeuAc(3) (T), Hex(2)HexNAc(3)NeuGc(1) (S), Hex(2)HexNAc(3)NeuGc(1) (T), Hex(2)HexNAc(3)NeuGc(2) (S), Hex(2)HexNAc(3)NeuGc(2) (T), Hex(2)HexNAc(3)NeuGc(3) (S), Hex(2)HexNAc(3)NeuGc(3) (T), Hex(2)HexNAc(3)Sulf(1) (S), Hex(2)HexNAc(3)Sulf(1) (T), Hex(2)HexNAc(4) (N), Hex(2)HexNAc(4) (S), Hex(2)HexNAc(4) (T), Hex(2)HexNAc(4)NeuAc(1) (S), Hex(2)HexNAc(4)NeuAc(1) (T), Hex(2)HexNAc(5) (S), Hex(2)HexNAc(5) (T), Hex(2)NeuAc(1) (S), Hex(2)NeuAc(1) (T), Hex(2)Pent(2) (S), Hex(2)Pent(2) (T), Hex(2)Pent(2)Me(1) (S), Hex(2)Pent(2)Me(1) (T), Hex(2)Sulf(1) (S), Hex(2)Sulf(1) (T), Hex(3) (N), Hex(3) (S), Hex(3) (T), Hex(3)HexNAc(1) (N), Hex(3)HexNAc(1) (S), Hex(3)HexNAc(1) (T), Hex(3)HexNAc(1)HexA(1) (S), Hex(3)HexNAc(1)HexA(1) (T), Hex(3)HexNAc(1)Me(1) (S), Hex(3)HexNAc(1)Me(1) (T), Hex(3)HexNAc(1)Pent(1) (N), Hex(3)HexNAc(2) (N), Hex(3)HexNAc(2) (S), Hex(3)HexNAc(2) (T), Hex(3)HexNAc(2)NeuAc(1) (N), Hex(3)HexNAc(2)NeuAc(2) (S), Hex(3)HexNAc(2)NeuAc(2) (T), Hex(3)HexNAc(2)Pent(1) (N), Hex(3)HexNAc(2)Phos(1) (N), Hex(3)HexNAc(3) (N), Hex(3)HexNAc(3) (S), Hex(3)HexNAc(3) (T), Hex(3)HexNAc(3)NeuAc(1) (S), Hex(3)HexNAc(3)NeuAc(1) (T), Hex(3)HexNAc(3)NeuAc(1)Sulf(1) (S), Hex(3)HexNAc(3)NeuAc(1)Sulf(1) (T), Hex(3)HexNAc(3)NeuAc(2) (S), Hex(3)HexNAc(3)NeuAc(2) (T), Hex(3)HexNAc(3)NeuAc(2)Sulf(1) (S), Hex(3)HexNAc(3)NeuAc(2)Sulf(1) (T), Hex(3)HexNAc(3)NeuAc(3) (S), Hex(3)HexNAc(3)NeuAc(3) (T), Hex(3)HexNAc(3)NeuGc(1) (S), Hex(3)HexNAc(3)NeuGc(1) (T), Hex(3)HexNAc(3)NeuGc(1)Sulf(1) (S), Hex(3)HexNAc(3)NeuGc(1)Sulf(1) (T), Hex(3)HexNAc(3)Pent(1) (N), Hex(3)HexNAc(3)Sulf(1) (N), Hex(3)HexNAc(3)Sulf(1) (S), Hex(3)HexNAc(3)Sulf(1) (T), Hex(3)HexNAc(4) (N), Hex(3)HexNAc(4) (S), Hex(3)HexNAc(4) (T), Hex(3)HexNAc(4)NeuAc(1) (N), Hex(3)HexNAc(4)NeuAc(2) (N), Hex(3)HexNAc(4)Pent(1) (N), Hex(3)HexNAc(4)Sulf(1) (N), Hex(3)HexNAc(5) (N), Hex(3)HexNAc(5) (S), Hex(3)HexNAc(5) (T), Hex(3)HexNAc(5)NeuAc(1) (N), Hex(3)HexNAc(5)Sulf(1) (N), Hex(3)HexNAc(6) (N), Hex(3)HexNAc(6) (S), Hex(3)HexNAc(6) (T), Hex(3)HexNAc(6)NeuAc(1) (N), Hex(3)HexNAc(6)Sulf(1) (N), Hex(3)HexNAc(6)Sulf(2) (N), Hex(3)HexNAc(7) (N), Hex(3)HexNAc(7)Sulf(1) (N), Hex(4) (S), Hex(4) (T), Hex(4)HexA(1) (S), Hex(4)HexA(1) (T), Hex(4)HexA(1)HexNAc(1) (S), Hex(4)HexA(1)HexNAc(1) (T), Hex(4)HexNAc(1) (N), Hex(4)HexNAc(1) (S), Hex(4)HexNAc(1) (T), Hex(4)HexNAc(2) (N), Hex(4)HexNAc(2)NeuAc(1) (N), Hex(4)HexNAc(2)NeuAc(1) (S), Hex(4)HexNAc(2)NeuAc(1) (T), Hex(4)HexNAc(2)Pent(1) (N), Hex(4)HexNAc(3) (N), Hex(4)HexNAc(3) (S), Hex(4)HexNAc(3) (T), Hex(4)HexNAc(3)NeuAc(1) (N), Hex(4)HexNAc(3)NeuAc(1) (S), Hex(4)HexNAc(3)NeuAc(1) (T), Hex(4)HexNAc(3)NeuAc(2) (N), Hex(4)HexNAc(3)NeuGc(1) (N), Hex(4)HexNAc(3)Pent(1) (N), Hex(4)HexNAc(4) (N), Hex(4)HexNAc(4) (S), Hex(4)HexNAc(4) (T), Hex(4)HexNAc(4)Me(2)Pent(1) (N), Hex(4)HexNAc(4)NeuAc(1) (N), Hex(4)HexNAc(4)NeuAc(1) (S), Hex(4)HexNAc(4)NeuAc(1) (T), Hex(4)HexNAc(4)NeuAc(1)Sulf(2) (S), Hex(4)HexNAc(4)NeuAc(1)Sulf(2) (T), Hex(4)HexNAc(4)NeuAc(1)Sulf(3) (S), Hex(4)HexNAc(4)NeuAc(1)Sulf(3) (T), Hex(4)HexNAc(4)NeuGc(1) (N), Hex(4)HexNAc(4)NeuGc(1) (S), Hex(4)HexNAc(4)NeuGc(1) (T), Hex(4)HexNAc(4)NeuGc(1)Sulf(2) (S), Hex(4)HexNAc(4)NeuGc(1)Sulf(2) (T), Hex(4)HexNAc(4)Pent(1) (N), Hex(4)HexNAc(4)Sulf(1) (N), Hex(4)HexNAc(4)Sulf(2) (S), Hex(4)HexNAc(4)Sulf(2) (T), Hex(4)HexNAc(5) (N), Hex(4)HexNAc(5)NeuAc(1) (N), Hex(4)HexNAc(5)Sulf(1) (N), Hex(4)HexNAc(6) (N), Hex(4)Phos(1) (S), Hex(4)Phos(1) (T), Hex(5) (S), Hex(5) (T), Hex(5)HexA(1) (S), Hex(5)HexA(1) (T), Hex(5)HexNAc(1) (N), Hex(5)HexNAc(1) (S), Hex(5)HexNAc(1) (T), Hex(5)HexNAc(2) (N), Hex(5)HexNAc(2)Phos(1) (N), Hex(5)HexNAc(3) (N), Hex(5)HexNAc(3)Pent(1) (N), Hex(5)HexNAc(4) (N), Hex(5)HexNAc(4) (S), Hex(5)HexNAc(4) (T), Hex(5)HexNAc(4)Me(2)Pent(1) (N), Hex(5)HexNAc(4)NeuAc(1) (N), Hex(5)HexNAc(4)NeuAc(1)Ac(1) (N), Hex(5)HexNAc(4)NeuAc(1)Ac(2) (N), Hex(5)HexNAc(4)NeuAc(1)Sulf(1) (N), Hex(5)HexNAc(4)NeuAc(2) (N), Hex(5)HexNAc(4)NeuGc(1) (N), Hex(5)HexNAc(4)Sulf(1) (N), Hex(5)HexNAc(5) (N), Hex(5)HexNAc(5) (S), Hex(5)HexNAc(5) (T), Hex(5)Phos(1) (S), Hex(5)Phos(1) (T), Hex(5)Phos(3) (S), Hex(5)Phos(3) (T), Hex(6)HexNAc(1) (N), Hex(6)HexNAc(2) (N), Hex(6)HexNAc(2)Phos(1) (N), Hex(6)HexNAc(3) (N), Hex(6)HexNAc(3)Phos(1) (N), Hex(6)HexNAc(4) (N), Hex(6)HexNAc(4) (S), Hex(6)HexNAc(4) (T), Hex(6)HexNAc(4)Me(3) (N), Hex(6)HexNAc(4)Me(3)Pent(1) (N), Hex(6)HexNAc(5) (N), Hex(6)HexNAc(5)NeuAc(3) (N), Hex(6)Phos(1) (S), Hex(6)Phos(1) (T), Hex(6)Phos(3) (S), Hex(6)Phos(3) (T), Hex(7)HexNAc(1) (N), Hex(7)HexNAc(2) (N), Hex(7)HexNAc(2)Phos(1) (N), Hex(7)HexNAc(2)Phos(2) (N), Hex(7)HexNAc(3) (N), Hex(7)HexNAc(3)Phos(1) (N), Hex(7)HexNAc(4) (N), Hex(7)HexNAc(6) (N), Hex(7)HexNAc(6) (S), Hex(7)HexNAc(6) (T), Hex(7)Phos(3) (S), Hex(7)Phos(3) (T), Hex(8)HexNAc(1) (N), Hex(8)HexNAc(2) (N), Hex(8)Phos(3) (S), Hex(8)Phos(3) (T), Hex(9) (N), Hex(9)HexNAc(1) (N), Hex(9)HexNAc(2) (N), Hex(9)Phos(3) (S), Hex(9)Phos(3) (T), HexA(2)HexNAc(3) (S), HexA(2)HexNAc(3) (T), Hexanoyl (K), HexN (K), HexN (N), HexN (S), HexN (T), HexN (W), HexNAc (C), HexNAc (N), HexNAc (S), HexNAc (T), HexNAc(1)dHex(1) (N), HexNAc(1)dHex(1) (S), HexNAc(1)dHex(1) (T), HexNAc(1)dHex(2) (N), HexNAc(1)Kdn(2) (S), HexNAc(1)Kdn(2) (T), HexNAc(1)NeuAc(1) (S), HexNAc(1)NeuAc(1) (T), HexNAc(1)NeuGc(1) (S), HexNAc(1)NeuGc(1) (T), HexNAc(1)NeuGc(2) (S), HexNAc(1)NeuGc(2) (T), HexNAc(2) (N), HexNAc(2) (S), HexNAc(2) (T), HexNAc(2)dHex(1) (N), HexNAc(2)dHex(2) (N), HexNAc(2)NeuAc(1) (S), HexNAc(2)NeuAc(1) (T), HexNAc(2)NeuAc(1)Sulf(1) (S), HexNAc(2)NeuAc(1)Sulf(1) (T), HexNAc(2)NeuGc(1) (S), HexNAc(2)NeuGc(1) (T), HexNAc(2)Sulf(1) (S), HexNAc(2)Sulf(1) (T), HexNAc(3) (S), HexNAc(3) (T), HexNAc(3)Sulf(1) (S), HexNAc(3)Sulf(1) (T), HexNAc(4) (S), HexNAc(4) (T), HexNAc(5) (S), HexNAc(5) (T), His+O(2) (H), His->Ala (H), His->Arg (H), His->Asn (H), His->Asp (H), His->Cys (H), His->Gln (H), His->Glu (H), His->Gly (H), His->Lys (H), His->Met (H), His->Phe (H), His->Pro (H), His->Ser (H), His->Thr (H), His->Trp (H), His->Tyr (H), His->Val (H), His->Xle (H), HMVK (C), HN2_mustard (C), HN2_mustard (H), HN2_mustard (K), HN3_mustard (C), HN3_mustard (H), HN3_mustard (K), HNE (A), HNE (C), HNE (H), HNE (K), HNE (L), HNE (R), HNE+Delta:H(2) (C), HNE+Delta:H(2) (H), HNE+Delta:H(2) (K), HNE-BAHAH (C), HNE-BAHAH (H), HNE-BAHAH (K), HNE-Delta:H(2)O (C), HNE-Delta:H(2)O (H), HNE-Delta:H(2)O (K), Homocysteic_acid (M), HPG (R), Hydroxamic_acid (D), Hydroxamic_acid (E), Hydroxycinnamyl (C), Hydroxyfarnesyl (C), Hydroxyheme (E), hydroxyisobutyryl (K), Hydroxymethyl (N), HydroxymethylOP (K), Hydroxytrimethyl (K), Hypusine (K), IASD (C), IBTP (C), ICAT-C (C), ICAT-C:13C(9) (C), ICAT-D (C), ICAT-D:2H(8) (C), ICAT-G (C), ICAT-G:2H(8) (C), ICAT-H (C), ICAT-H:13C(6) (C), ICDID (C), ICDID:2H(6) (C), ICPL (K), ICPL (N-term), ICPL (Protein N-term), ICPL:13C(6) (K), ICPL:13C(6) (N-term), ICPL:13C(6) (Protein N-term), ICPL:13C(6)2H(4) (K), ICPL:13C(6)2H(4) (N-term), ICPL:13C(6)2H(4) (Protein N-term), ICPL:2H(4) (K), ICPL:2H(4) (N-term), ICPL:2H(4) (Protein N-term), IDEnT (C), IED-Biotin (C), IGBP (C), IGBP:13C(2) (C), IMEHex(2)NeuAc(1) (K), IMID (K), IMID:2H(4) (K), Iminobiotin (K), Iminobiotin (N-term), Iodo (H), Iodo (Y), Iodoacetanilide (C), Iodoacetanilide (K), Iodoacetanilide (N-term), Iodoacetanilide:13C(6) (C), Iodoacetanilide:13C(6) (K), Iodoacetanilide:13C(6) (N-term), iodoTMT (C), iodoTMT (D), iodoTMT (E), iodoTMT (H), iodoTMT (K), iodoTMT6plex (C), iodoTMT6plex (D), iodoTMT6plex (E), iodoTMT6plex (H), iodoTMT6plex (K), IodoU-AMP (F), IodoU-AMP (W), IodoU-AMP (Y), ISD_z+2_ion (N-term), Isopropylphospho (S), Isopropylphospho (T), Isopropylphospho (Y), Isovaleryl (K), iST-NHS specific cysteine modification (C), Itaconatyl (C), Itaconyl (K), iTRAQ4plex (C), iTRAQ4plex (H), iTRAQ4plex (K), iTRAQ4plex (N-term), iTRAQ4plex (Protein N-term), iTRAQ4plex (S), iTRAQ4plex (T), iTRAQ4plex (Y), iTRAQ4plex114 (C), iTRAQ4plex114 (K), iTRAQ4plex114 (N-term), iTRAQ4plex114 (Y), iTRAQ4plex115 (C), iTRAQ4plex115 (K), iTRAQ4plex115 (N-term), iTRAQ4plex115 (Y), iTRAQ8plex (C), iTRAQ8plex (H), iTRAQ8plex (K), iTRAQ8plex (N-term), iTRAQ8plex (Protein N-term), iTRAQ8plex (S), iTRAQ8plex (T), iTRAQ8plex (Y), iTRAQ8plex:13C(6)15N(2) (C), iTRAQ8plex:13C(6)15N(2) (K), iTRAQ8plex:13C(6)15N(2) (N-term), iTRAQ8plex:13C(6)15N(2) (Y), L-Gln (D), L-Gln (E), Label:13C(1)2H(3) (M), Label:13C(1)2H(3)+Oxidation (M), Label:13C(2)15N(1) (G), Label:13C(2)15N(2) (K), Label:13C(3) (A), Label:13C(3)15N(1) (A), Label:13C(3)15N(1) (S), Label:13C(4) (M), Label:13C(4)+Oxidation (M), Label:13C(4)15N(1) (D), Label:13C(4)15N(2)+GG (K), Label:13C(5) (P), Label:13C(5)15N(1) (E), Label:13C(5)15N(1) (M), Label:13C(5)15N(1) (P), Label:13C(5)15N(1) (V), Label:13C(6) (I), Label:13C(6) (K), Label:13C(6) (L), Label:13C(6) (R), Label:13C(6)+Acetyl (K), Label:13C(6)+Dimethyl (K), Label:13C(6)+GG (K), Label:13C(6)15N(1) (I), Label:13C(6)15N(1) (L), Label:13C(6)15N(2) (K), Label:13C(6)15N(2)+Acetyl (K), Label:13C(6)15N(2)+Dimethyl (K), Label:13C(6)15N(2)+GG (K), Label:13C(6)15N(2)+TMT6plex (K), Label:13C(6)15N(2)+TMTpro (K), Label:13C(6)15N(4) (R), Label:13C(6)15N(4)+Dimethyl (R), Label:13C(6)15N(4)+Dimethyl:2H(6)13C(2) (R), Label:13C(6)15N(4)+Methyl (R), Label:13C(6)15N(4)+Methyl:2H(3)13C(1) (R), Label:13C(9) (F), Label:13C(9) (Y), Label:13C(9)+Phospho (Y), Label:13C(9)15N(1) (F), Label:15N(1) (A), Label:15N(1) (C), Label:15N(1) (D), Label:15N(1) (E), Label:15N(1) (F), Label:15N(1) (G), Label:15N(1) (I), Label:15N(1) (L), Label:15N(1) (M), Label:15N(1) (P), Label:15N(1) (S), Label:15N(1) (T), Label:15N(1) (V), Label:15N(1) (Y), Label:15N(2) (K), Label:15N(2) (N), Label:15N(2) (Q), Label:15N(2) (W), Label:15N(2)2H(9) (K), Label:15N(3) (H), Label:15N(4) (R), Label:18O(1) (C-term), Label:18O(1) (S), Label:18O(1) (T), Label:18O(1) (Y), Label:18O(2) (C-term), Label:2H(10) (L), Label:2H(3) (L), Label:2H(3) (M), Label:2H(3)+Oxidation (M), Label:2H(4) (A), Label:2H(4) (F), Label:2H(4) (K), Label:2H(4) (U), Label:2H(4) (Y), Label:2H(4)+Acetyl (K), Label:2H(4)+GG (K), Label:2H(4)13C(1) (R), Label:2H(6)15N(1) (P), Label:2H(7)15N(4) (R), Label:2H(9)13C(6)15N(2) (K), Lactylation (K), lapachenole (C), Leu->MetOx (L), LG-anhydrolactam (K), LG-anhydrolactam (N-term), LG-anhyropyrrole (K), LG-anhyropyrrole (N-term), LG-Hlactam-K (K), LG-Hlactam-K (Protein N-term), LG-Hlactam-R (R), LG-lactam-K (K), LG-lactam-K (Protein N-term), LG-lactam-R (R), LG-pyrrole (C), LG-pyrrole (K), LG-pyrrole (N-term), Lipoyl (K), LRGG (K), LRGG+dimethyl (K), LRGG+methyl (K), LTX+Lophotoxin (Y), Lys (N-term), Lys+O(2) (H), Lys->Ala (K), Lys->Allysine (K), Lys->AminoadipicAcid (K), Lys->Arg (K), Lys->Asn (K), Lys->Asp (K), Lys->CamCys (K), Lys->Cys (K), Lys->Gln (K), Lys->Glu (K), Lys->Gly (K), Lys->His (K), Lys->Met (K), Lys->MetOx (K), Lys->Phe (K), Lys->Pro (K), Lys->Ser (K), Lys->Thr (K), Lys->Trp (K), Lys->Tyr (K), Lys->Val (K), Lys->Xle (K), Lys-loss (K), Lys-loss (Protein C-term K), Lysbiotinhydrazide (K), maleimide (C), maleimide (K), Maleimide-PEO2-Biotin (C), maleimide3 (C), maleimide3 (K), maleimide5 (C), maleimide5 (K), Malonyl (C), Malonyl (K), Malonyl (S), MBS+peptide (C), MDCC (C), MeMePhosphorothioate (S), Menadione (C), Menadione (K), Menadione-HQ (C), Menadione-HQ (K), MercaptoEthanol (S), MercaptoEthanol (T), MesitylOxide (H), MesitylOxide (K), MesitylOxide (Protein N-term), Met+O(2) (H), Met->Aha (M), Met->Ala (M), Met->Arg (M), Met->Asn (M), Met->Asp (M), Met->AspSA (M), Met->Cys (M), Met->Gln (M), Met->Glu (M), Met->Gly (M), Met->His (M), Met->Hpg (M), Met->Hse (C-term M), Met->Hsl (C-term M), Met->Lys (M), Met->Phe (M), Met->Pro (M), Met->Ser (M), Met->Thr (M), Met->Trp (M), Met->Tyr (M), Met->Val (M), Met->Xle (M), Met-loss (Protein N-term M), Met-loss+Acetyl (Protein N-term M), Methamidophos-O (C), Methamidophos-O (H), Methamidophos-O (K), Methamidophos-O (S), Methamidophos-O (T), Methamidophos-O (Y), Methamidophos-S (C), Methamidophos-S (H), Methamidophos-S (K), Methamidophos-S (S), Methamidophos-S (T), Methamidophos-S (Y), Methyl (C), Methyl (C-term), Methyl (D), Methyl (E), Methyl (H), Methyl (I), Methyl (K), Methyl (L), Methyl (N), Methyl (N-term), Methyl (Protein N-term), Methyl (Q), Methyl (R), Methyl (S), Methyl (T), Methyl+Acetyl:2H(3) (K), Methyl+Deamidated (N), Methyl+Deamidated (Q), Methyl-PEO12-Maleimide (C), Methyl:2H(2) (K), Methyl:2H(2) (N-term), Methyl:2H(2)13C (C), Methyl:2H(2)13C (C-term), Methyl:2H(2)13C (D), Methyl:2H(2)13C (E), Methyl:2H(2)13C (H), Methyl:2H(2)13C (I), Methyl:2H(2)13C (K), Methyl:2H(2)13C (L), Methyl:2H(2)13C (N), Methyl:2H(2)13C (N-term), Methyl:2H(2)13C (Protein N-term), Methyl:2H(2)13C (Q), Methyl:2H(2)13C (R), Methyl:2H(2)13C (S), Methyl:2H(2)13C (T), Methyl:2H(3) (D), Methyl:2H(3) (E), Methyl:2H(3) (K), Methyl:2H(3) (R), Methyl:2H(3) (X), Methyl:2H(3)+Acetyl:2H(3) (K), Methyl:2H(3)13C(1) (K), Methyl:2H(3)13C(1) (N-term), Methyl:2H(3)13C(1) (R), Methylamine (S), Methylamine (T), Methylmalonylation (S), methylol (K), methylol (W), methylol (Y), Methylphosphonate (S), Methylphosphonate (T), Methylphosphonate (Y), Methylpyrroline (K), methylsulfonylethyl (C), methylsulfonylethyl (H), methylsulfonylethyl (K), Methylthio (C), Methylthio (D), Methylthio (K), Methylthio (N), Methylthio (N-term), MG-H1 (R), Microcin (Protein C-term), MicrocinC7 (Protein C-term), MM-diphenylpentanone (C), Molybdopterin (C), MolybdopterinGD (C), MolybdopterinGD (D), MolybdopterinGD (U), MolybdopterinGD+Delta:S(-1)Se(1) (C), Mono_Ngamma-propargyl-L-Gln_desthiobiotin (C), monomethylphosphothione (C), monomethylphosphothione (H), monomethylphosphothione (K), monomethylphosphothione (S), monomethylphosphothione (T), monomethylphosphothione (Y), mTRAQ (H), mTRAQ (K), mTRAQ (N-term), mTRAQ (S), mTRAQ (T), mTRAQ (Y), mTRAQ:13C(3)15N(1) (H), mTRAQ:13C(3)15N(1) (K), mTRAQ:13C(3)15N(1) (N-term), mTRAQ:13C(3)15N(1) (S), mTRAQ:13C(3)15N(1) (T), mTRAQ:13C(3)15N(1) (Y), mTRAQ:13C(6)15N(2) (H), mTRAQ:13C(6)15N(2) (K), mTRAQ:13C(6)15N(2) (N-term), mTRAQ:13C(6)15N(2) (S), mTRAQ:13C(6)15N(2) (T), mTRAQ:13C(6)15N(2) (Y), MTSL (C), MurNAc (A), Myristoleyl (Protein N-term G), Myristoyl (C), Myristoyl (K), Myristoyl (N-term G), Myristoyl+Delta:H(-4) (Protein N-term G), N-dimethylphosphate (S), N6pAMP (S), N6pAMP (T), N6pAMP (Y), NA-LNO2 (C), NA-LNO2 (H), NA-OA-NO2 (C), NA-OA-NO2 (H), NBF (C), NBF (K), NBF (R), NBS (W), NBS:13C(6) (W), NDA (K), NDA (N-term), NEIAA (C), NEIAA (Y), NEIAA:2H(5) (C), NEIAA:2H(5) (Y), NEM:2H(5) (C), NEM:2H(5)+H2O (C), NEMsulfur (C), NEMsulfurWater (C), Nethylmaleimide (C), Nethylmaleimide+water (C), Nethylmaleimide+water (K), NeuAc (N), NeuAc (S), NeuAc (T), NeuGc (N), NeuGc (S), NeuGc (T), NHS-fluorescein (K), NHS-LC-Biotin (K), NHS-LC-Biotin (N-term), NIC (K), NIC (N-term), NIPCAM (C), Nitrene (Y), Nitro (F), Nitro (W), Nitro (Y), Nitrosyl (C), Nitrosyl (Y), Nmethylmaleimide (C), Nmethylmaleimide (K), Nmethylmaleimide+water (C), NO_SMX_SEMD (C), NO_SMX_SIMD (C), NP40 (N-term), NQIGG (K), NQTGG (K), O-Dimethylphosphate (S), O-Dimethylphosphate (T), O-Dimethylphosphate (Y), O-Et-N-diMePhospho (S), O-Isopropylmethylphosphonate (S), O-Isopropylmethylphosphonate (T), O-Isopropylmethylphosphonate (Y), O-Methylphosphate (S), O-Methylphosphate (T), O-Methylphosphate (Y), O-pinacolylmethylphosphonate (H), O-pinacolylmethylphosphonate (K), O-pinacolylmethylphosphonate (S), O-pinacolylmethylphosphonate (T), O-pinacolylmethylphosphonate (Y), Octanoyl (C), Octanoyl (S), Octanoyl (T), OxArgBiotin (R), OxArgBiotinRed (R), Oxidation (C), Oxidation (C-term G), Oxidation (D), Oxidation (E), Oxidation (F), Oxidation (H), Oxidation (I), Oxidation (K), Oxidation (L), Oxidation (M), Oxidation (N), Oxidation (P), Oxidation (Q), Oxidation (R), Oxidation (S), Oxidation (T), Oxidation (U), Oxidation (V), Oxidation (W), Oxidation (Y), Oxidation+NEM (C), OxLysBiotin (K), OxLysBiotinRed (K), OxProBiotin (P), OxProBiotinRed (P), Palmitoleyl (C), Palmitoleyl (S), Palmitoleyl (T), Palmitoyl (C), Palmitoyl (K), Palmitoyl (Protein N-term), Palmitoyl (S), Palmitoyl (T), PEITC (C), PEITC (K), PEITC (N-term), Pent(1)HexNAc(1) (S), Pent(1)HexNAc(1) (T), Pent(2) (S), Pent(2) (T), Pentanoyl (K), Pentose (S), Pentose (T), Pentylamine (Q), PEO-Iodoacetyl-LC-Biotin (C), PET (S), PET (T), Phe->Ala (F), Phe->Arg (F), Phe->Asn (F), Phe->Asp (F), Phe->CamCys (F), Phe->Cys (F), Phe->Gln (F), Phe->Glu (F), Phe->Gly (F), Phe->His (F), Phe->Lys (F), Phe->Met (F), Phe->Pro (F), Phe->Ser (F), Phe->Thr (F), Phe->Trp (F), Phe->Tyr (F), Phe->Val (F), Phe->Xle (F), phenyl-phosphate (K), phenyl-phosphate (S), phenyl-phosphate (T), phenyl-phosphate (Y), Phenylisocyanate (N-term), Phenylisocyanate:2H(5) (N-term), phenylsulfonylethyl (C), Phospho (C), Phospho (D), Phospho (E), Phospho (H), Phospho (K), Phospho (R), Phospho (S), Phospho (T), Phospho (Y), Phosphoadenosine (H), Phosphoadenosine (K), Phosphoadenosine (S), Phosphoadenosine (T), Phosphoadenosine (Y), PhosphoCytidine (S), PhosphoCytidine (T), PhosphoCytidine (Y), PhosphoDecoy (A), PhosphoDecoy (G), PhosphoDecoy (L), Phosphogluconoylation (K), Phosphogluconoylation (N-term), Phosphoguanosine (H), Phosphoguanosine (K), PhosphoHex (S), PhosphoHex (T), PhosphoHex(2) (N), PhosphoHex(2) (S), PhosphoHex(2) (T), PhosphoHexNAc (S), PhosphoHexNAc (T), Phosphopantetheine (S), Phosphopropargyl (S), Phosphopropargyl (T), Phosphopropargyl (Y), phosphoRibosyl (D), phosphoRibosyl (E), phosphoRibosyl (R), PhosphoribosyldephosphoCoA (S), PhosphoUridine (H), PhosphoUridine (Y), Phycocyanobilin (C), Phycoerythrobilin (C), Phytochromobilin (C), Piperidine (K), Piperidine (N-term), pRBS-ID_4-thiouridine (F), pRBS-ID_6-thioguanosine (W), Pro+O(2) (H), Pro->Ala (P), Pro->Arg (P), Pro->Asn (P), Pro->Asp (P), Pro->Cys (P), Pro->Gln (P), Pro->Glu (P), Pro->Gly (P), Pro->HAVA (P), Pro->His (P), Pro->Lys (P), Pro->Met (P), Pro->Phe (P), Pro->pyro-Glu (P), Pro->Pyrrolidinone (P), Pro->Pyrrolidone (P), Pro->Ser (P), Pro->Thr (P), Pro->Trp (P), Pro->Tyr (P), Pro->Val (P), Pro->Xle (P), probiotinhydrazide (P), Propargylamine (C-term), Propargylamine (D), Propargylamine (E), Propionamide (C), Propionamide (K), Propionamide (N-term), Propionamide:2H(3) (C), Propionyl (K), Propionyl (N-term), Propionyl (Protein N-term), Propionyl (S), Propionyl (T), Propionyl:13C(3) (K), Propionyl:13C(3) (N-term), Propiophenone (C), Propiophenone (H), Propiophenone (K), Propiophenone (R), Propiophenone (S), Propiophenone (T), Propiophenone (W), Propyl (C-term), Propyl (D), Propyl (E), Propyl (K), Propyl (N-term), Propyl (Protein C-term), Propyl:2H(6) (K), Propyl:2H(6) (N-term), PropylNAGthiazoline (C), PS_Hapten (C), PS_Hapten (H), PS_Hapten (K), pupylation (K), Puromycin (C-term), PyMIC (N-term), PyridoxalPhosphate (K), PyridoxalPhosphateH2 (K), Pyridylacetyl (K), Pyridylacetyl (N-term), Pyridylethyl (C), Pyro-carbamidomethyl (N-term C), Pyro-QQTGG (K), pyrophospho (S), pyrophospho (T), PyruvicAcidIminyl (K), PyruvicAcidIminyl (Protein N-term C), PyruvicAcidIminyl (Protein N-term V), Pyruvoyl (K), QAT (C), QAT:2H(3) (C), QEQTGG (K), QQQTGG (K), QQTGG (K), QTGG (K), Quinone (W), Quinone (Y), RBS-ID_Uridine (Y), Retinylidene (K), RNPXL (N-term K), RNPXL (N-term R), RNPXlink1 (C), s-GlcNAc (S), s-GlcNAc (T), Saligenin (H), Saligenin (K), Ser->Ala (S), Ser->Arg (S), Ser->Asn (S), Ser->Asp (S), Ser->Cys (S), Ser->Gln (S), Ser->Glu (S), Ser->Gly (S), Ser->His (S), Ser->LacticAcid (Protein N-term S), Ser->Lys (S), Ser->Met (S), Ser->Phe (S), Ser->Pro (S), Ser->Thr (S), Ser->Trp (S), Ser->Tyr (S), Ser->Val (S), Ser->Xle (S), Ser/Thr-KDO (S), Ser/Thr-KDO (T), serotonylation (Q), shTMT (K), shTMT (N-term), shTMT (Protein N-term), shTMTpro (K), shTMTpro (N-term), shTMTpro (Protein N-term), SMA (K), SMA (N-term), spermidine (Q), spermine (Q), SPITC (K), SPITC (N-term), SPITC:13C(6) (K), SPITC:13C(6) (N-term), Succinyl (K), Succinyl (N-term), Succinyl (Protein N-term), Succinyl:13C(4) (K), Succinyl:13C(4) (N-term), Succinyl:2H(4) (K), Succinyl:2H(4) (N-term), SulfanilicAcid (C-term), SulfanilicAcid (D), SulfanilicAcid (E), SulfanilicAcid:13C(6) (C-term), SulfanilicAcid:13C(6) (D), SulfanilicAcid:13C(6) (E), Sulfide (C), Sulfide (D), Sulfide (W), Sulfo (C), Sulfo (S), Sulfo (T), Sulfo (Y), sulfo+amino (Y), Sulfo-NHS-LC-LC-Biotin (K), Sulfo-NHS-LC-LC-Biotin (N-term), SulfoGMBS (C), SulfurDioxide (C), SUMO2135 (K), SUMO3549 (K), TAMRA-FP (S), TAMRA-FP (Y), Thiadiazole (C), Thiazolidine (C), Thiazolidine (F), Thiazolidine (H), Thiazolidine (K), Thiazolidine (Protein N-term), Thiazolidine (R), Thiazolidine (W), Thiazolidine (Y), thioacylPA (K), Thiophos-S-S-biotin (S), Thiophos-S-S-biotin (T), Thiophos-S-S-biotin (Y), Thiophospho (S), Thiophospho (T), Thiophospho (Y), Thr->Ala (T), Thr->Arg (T), Thr->Asn (T), Thr->Asp (T), Thr->Cys (T), Thr->Gln (T), Thr->Glu (T), Thr->Gly (T), Thr->His (T), Thr->Lys (T), Thr->Met (T), Thr->Phe (T), Thr->Pro (T), Thr->Ser (T), Thr->Trp (T), Thr->Tyr (T), Thr->Val (T), Thr->Xle (T), Thrbiotinhydrazide (T), Thyroxine (Y), Tiglyl (K), TMAB (K), TMAB (N-term), TMAB:2H(9) (K), TMAB:2H(9) (N-term), TMPP-Ac (K), TMPP-Ac (N-term), TMPP-Ac (Y), TMPP-Ac:13C(9) (K), TMPP-Ac:13C(9) (N-term), TMPP-Ac:13C(9) (Y), TMT (H), TMT (K), TMT (N-term), TMT (Protein N-term), TMT (S), TMT (T), TMT2plex (H), TMT2plex (K), TMT2plex (N-term), TMT2plex (Protein N-term), TMT2plex (S), TMT2plex (T), TMT6plex (H), TMT6plex (K), TMT6plex (N-term), TMT6plex (Protein N-term), TMT6plex (S), TMT6plex (T), TMTpro (H), TMTpro (K), TMTpro (N-term), TMTpro (Protein N-term), TMTpro (S), TMTpro (T), TMTpro_zero (H), TMTpro_zero (K), TMTpro_zero (N-term), TMTpro_zero (Protein N-term), TMTpro_zero (S), TMTpro_zero (T), TNBS (K), TNBS (N-term), trifluoro (L), Triiodo (Y), Triiodothyronine (Y), Trimethyl (K), Trimethyl (Protein N-term A), Trimethyl (R), Trimethyl:13C(3)2H(9) (K), Trimethyl:13C(3)2H(9) (R), Trimethyl:2H(9) (K), Trimethyl:2H(9) (R), Trioxidation (C), Trioxidation (F), Trioxidation (W), Trioxidation (Y), Tripalmitate (Protein N-term C), Tris (N), Triton (C-term), Triton (N-term), Trp->Ala (W), Trp->Arg (W), Trp->Asn (W), Trp->Asp (W), Trp->Cys (W), Trp->Gln (W), Trp->Glu (W), Trp->Gly (W), Trp->His (W), Trp->Hydroxykynurenin (W), Trp->Kynurenin (W), Trp->Lys (W), Trp->Met (W), Trp->Oxolactone (W), Trp->Phe (W), Trp->Pro (W), Trp->Ser (W), Trp->Thr (W), Trp->Tyr (W), Trp->Val (W), Trp->Xle (W), Tween20 (N-term), Tween80 (C-term), Tyr->Ala (Y), Tyr->Arg (Y), Tyr->Asn (Y), Tyr->Asp (Y), Tyr->Cys (Y), Tyr->Dha (Y), Tyr->Gln (Y), Tyr->Glu (Y), Tyr->Gly (Y), Tyr->His (Y), Tyr->Lys (Y), Tyr->Met (Y), Tyr->Phe (Y), Tyr->Pro (Y), Tyr->Ser (Y), Tyr->Thr (Y), Tyr->Trp (Y), Tyr->Val (Y), Tyr->Xle (Y), Ub-Br2 (C), Ub-fluorescein (C), Ub-VME (C), UgiJoullie (D), UgiJoullie (E), UgiJoullieProGly (D), UgiJoullieProGly (E), UgiJoullieProGlyProGly (D), UgiJoullieProGlyProGly (E), Unknown:162 (C-term), Unknown:162 (D), Unknown:162 (E), Unknown:162 (N-term), Unknown:177 (C-term), Unknown:177 (D), Unknown:177 (E), Unknown:177 (N-term), Unknown:210 (C-term), Unknown:210 (D), Unknown:210 (E), Unknown:210 (N-term), Unknown:216 (C-term), Unknown:216 (D), Unknown:216 (E), Unknown:216 (N-term), Unknown:234 (C-term), Unknown:234 (D), Unknown:234 (E), Unknown:234 (N-term), Unknown:248 (C-term), Unknown:248 (D), Unknown:248 (E), Unknown:248 (N-term), Unknown:250 (C-term), Unknown:250 (D), Unknown:250 (E), Unknown:250 (N-term), Unknown:302 (C-term), Unknown:302 (D), Unknown:302 (E), Unknown:302 (N-term), Unknown:306 (C-term), Unknown:306 (D), Unknown:306 (E), Unknown:306 (N-term), Unknown:420 (C-term), Unknown:420 (N-term), Val->Ala (V), Val->Arg (V), Val->Asn (V), Val->Asp (V), Val->Cys (V), Val->Gln (V), Val->Glu (V), Val->Gly (V), Val->His (V), Val->Lys (V), Val->Met (V), Val->Phe (V), Val->Pro (V), Val->Ser (V), Val->Thr (V), Val->Trp (V), Val->Tyr (V), Val->Xle (V), ValGly (K), VFQQQTGG (K), VIEVYQEQTGG (K), Withaferin (C), Xle->Ala (I), Xle->Ala (L), Xle->Arg (I), Xle->Arg (L), Xle->Asn (I), Xle->Asn (L), Xle->Asp (I), Xle->Asp (L), Xle->Cys (I), Xle->Cys (L), Xle->Gln (I), Xle->Gln (L), Xle->Glu (I), Xle->Glu (L), Xle->Gly (I), Xle->Gly (L), Xle->His (I), Xle->His (L), Xle->Lys (I), Xle->Lys (L), Xle->Met (I), Xle->Met (L), Xle->Phe (I), Xle->Phe (L), Xle->Pro (I), Xle->Pro (L), Xle->Ser (I), Xle->Ser (L), Xle->Thr (I), Xle->Thr (L), Xle->Trp (I), Xle->Trp (L), Xle->Tyr (I), Xle->Tyr (L), Xle->Val (I), Xle->Val (L), Xlink:B10621 (C), Xlink:BMOE (C), Xlink:BS2G[113] (K), Xlink:BS2G[113] (Protein N-term), Xlink:BS2G[114] (K), Xlink:BS2G[114] (Protein N-term), Xlink:BS2G[217] (K), Xlink:BS2G[217] (Protein N-term), Xlink:BS2G[96] (K), Xlink:BS2G[96] (Protein N-term), Xlink:BuUrBu[111] (K), Xlink:BuUrBu[111] (Protein N-term), Xlink:BuUrBu[111] (S), Xlink:BuUrBu[111] (T), Xlink:BuUrBu[111] (Y), Xlink:BuUrBu[196] (K), Xlink:BuUrBu[196] (Protein N-term), Xlink:BuUrBu[196] (S), Xlink:BuUrBu[196] (T), Xlink:BuUrBu[196] (Y), Xlink:BuUrBu[213] (K), Xlink:BuUrBu[213] (Protein N-term), Xlink:BuUrBu[213] (S), Xlink:BuUrBu[213] (T), Xlink:BuUrBu[213] (Y), Xlink:BuUrBu[214] (K), Xlink:BuUrBu[214] (Protein N-term), Xlink:BuUrBu[214] (S), Xlink:BuUrBu[214] (T), Xlink:BuUrBu[214] (Y), Xlink:BuUrBu[317] (K), Xlink:BuUrBu[317] (Protein N-term), Xlink:BuUrBu[317] (S), Xlink:BuUrBu[317] (T), Xlink:BuUrBu[317] (Y), Xlink:BuUrBu[85] (K), Xlink:BuUrBu[85] (Protein N-term), Xlink:BuUrBu[85] (S), Xlink:BuUrBu[85] (T), Xlink:BuUrBu[85] (Y), Xlink:DFDNB (K), Xlink:DFDNB (N), Xlink:DFDNB (Q), Xlink:DFDNB (R), Xlink:DMP[122] (K), Xlink:DMP[122] (Protein N-term), Xlink:DMP[139] (K), Xlink:DMP[139] (Protein N-term), Xlink:DMP[140] (K), Xlink:DMP[140] (Protein N-term), Xlink:DMP[154] (K), Xlink:DMP[154] (Protein N-term), Xlink:DSPP[210] (K), Xlink:DSPP[210] (Protein N-term), Xlink:DSPP[226] (K), Xlink:DSPP[226] (Protein N-term), Xlink:DSPP[228] (K), Xlink:DSPP[228] (Protein N-term), Xlink:DSPP[331] (K), Xlink:DSPP[331] (Protein N-term), Xlink:DSS[138] (K), Xlink:DSS[138] (Protein N-term), Xlink:DSS[155] (K), Xlink:DSS[155] (Protein N-term), Xlink:DSS[156] (K), Xlink:DSS[156] (Protein N-term), Xlink:DSS[259] (K), Xlink:DSS[259] (Protein N-term), Xlink:DSSO[104] (K), Xlink:DSSO[104] (Protein N-term), Xlink:DSSO[158] (K), Xlink:DSSO[158] (Protein N-term), Xlink:DSSO[175] (K), Xlink:DSSO[175] (Protein N-term), Xlink:DSSO[176] (K), Xlink:DSSO[176] (Protein N-term), Xlink:DSSO[279] (K), Xlink:DSSO[279] (Protein N-term), Xlink:DSSO[54] (K), Xlink:DSSO[54] (Protein N-term), Xlink:DSSO[86] (K), Xlink:DSSO[86] (Protein N-term), Xlink:DST[114] (K), Xlink:DST[114] (Protein N-term), Xlink:DST[132] (K), Xlink:DST[132] (Protein N-term), Xlink:DST[56] (K), Xlink:DST[56] (Protein N-term), Xlink:DTBP[172] (K), Xlink:DTBP[172] (Protein N-term), Xlink:DTBP[87] (K), Xlink:DTBP[87] (Protein N-term), Xlink:DTSSP[174] (K), Xlink:DTSSP[174] (Protein N-term), Xlink:DTSSP[192] (K), Xlink:DTSSP[192] (Protein N-term), Xlink:DTSSP[88] (K), Xlink:DTSSP[88] (Protein N-term), Xlink:EGS[115] (K), Xlink:EGS[115] (Protein N-term), Xlink:EGS[226] (K), Xlink:EGS[226] (Protein N-term), Xlink:EGS[244] (K), Xlink:EGS[244] (Protein N-term), Xlink:SMCC[219] (C), Xlink:SMCC[219] (K), Xlink:SMCC[219] (Protein N-term), Xlink:SMCC[237] (C), Xlink:SMCC[237] (K), Xlink:SMCC[237] (Protein N-term), Xlink:SMCC[321] (C), ZGB (K), ZGB (N-term), ZQG (K)

variable_modifications[Oxidation (M)] Variable modifications, specified using Unimod (www.unimod.org) terms, e.g. 'Carbamidomethyl (C)' or 'Oxidation (M)'15N-oxobutanoic (N-term C), 15N-oxobutanoic (Protein N-term S), 15N-oxobutanoic (Protein N-term T), 2-dimethylsuccinyl (C), 2-methylbutyryl (K), 2-monomethylsuccinyl (C), 2-nitrobenzyl (Y), 2-succinyl (C), 2HPG (R), 2PCA-triazole-ethanethiol (N-term), 3-deoxyglucosone (R), 3-hydroxy-3-methylglutaryl (K), 3-hydroxybenzyl-phosphate (K), 3-hydroxybenzyl-phosphate (S), 3-hydroxybenzyl-phosphate (T), 3-hydroxybenzyl-phosphate (Y), 3-methylglutaconyl (K), 3-methylglutaryl (K), 3-phosphoglyceryl (K), 3sulfo (N-term), 4-ONE (C), 4-ONE (H), 4-ONE (K), 4-ONE+Delta:H(-2)O(-1) (C), 4-ONE+Delta:H(-2)O(-1) (H), 4-ONE+Delta:H(-2)O(-1) (K), 4AcAllylGal (C), 6C-CysPAT (C), 6C-CysPAT (D), 6C-CysPAT (E), 6C-CysPAT (H), 6C-CysPAT (K), 6C-CysPAT (N-term), 6C-CysPAT (S), 6C-CysPAT (T), 6C-CysPAT (Y), a-type-ion (C-term), AccQTag (K), AccQTag (N-term), Acetoacetyl (K), Acetyl (C), Acetyl (H), Acetyl (K), Acetyl (N-term), Acetyl (Protein N-term), Acetyl (R), Acetyl (S), Acetyl (T), Acetyl (Y), Acetyl:13C(2) (K), Acetyl:13C(2) (Protein N-term), Acetyl:2H(3) (H), Acetyl:2H(3) (K), Acetyl:2H(3) (N-term), Acetyl:2H(3) (Protein N-term), Acetyl:2H(3) (S), Acetyl:2H(3) (T), Acetyl:2H(3) (Y), Acetyldeoxyhypusine (K), Acetylhypusine (K), ADP-Ribosyl (C), ADP-Ribosyl (D), ADP-Ribosyl (E), ADP-Ribosyl (K), ADP-Ribosyl (N), ADP-Ribosyl (R), ADP-Ribosyl (S), ADP-Ribosyl (T), AEBS (H), AEBS (K), AEBS (Protein N-term), AEBS (S), AEBS (Y), AEC-MAEC (S), AEC-MAEC (T), AEC-MAEC:2H(4) (S), AEC-MAEC:2H(4) (T), AFB1_Dialdehyde (K), AHA-Alkyne (M), AHA-Alkyne-KDDDD (M), AHA-SS (M), AHA-SS_CAM (M), Ahx2+Hsl (C-term), Ala->Arg (A), Ala->Asn (A), Ala->Asp (A), Ala->Cys (A), Ala->Gln (A), Ala->Glu (A), Ala->Gly (A), Ala->His (A), Ala->Lys (A), Ala->Met (A), Ala->Phe (A), Ala->Pro (A), Ala->Ser (A), Ala->Thr (A), Ala->Trp (A), Ala->Tyr (A), Ala->Val (A), Ala->Xle (A), Amidated (C-term), Amidated (Protein C-term), Amidine (K), Amidine (N-term), Amidino (C), Amino (Y), Ammonia-loss (N), Ammonia-loss (N-term C), Ammonia-loss (Protein N-term S), Ammonia-loss (Protein N-term T), Ammonium (C-term), Ammonium (D), Ammonium (E), AMTzHexNAc2 (N), AMTzHexNAc2 (S), AMTzHexNAc2 (T), Andro-H2O (C), Archaeol (C), Arg (N-term), Arg->Ala (R), Arg->Asn (R), Arg->Asp (R), Arg->Cys (R), Arg->Gln (R), Arg->Glu (R), Arg->GluSA (R), Arg->Gly (R), Arg->His (R), Arg->Lys (R), Arg->Met (R), Arg->Npo (R), Arg->Orn (R), Arg->Phe (R), Arg->Pro (R), Arg->Ser (R), Arg->Thr (R), Arg->Trp (R), Arg->Tyr (R), Arg->Val (R), Arg->Xle (R), Arg-loss (C-term R), Arg2PG (R), Argbiotinhydrazide (R), AROD (C), Asn->Ala (N), Asn->Arg (N), Asn->Asp (N), Asn->Cys (N), Asn->Gln (N), Asn->Glu (N), Asn->Gly (N), Asn->His (N), Asn->Lys (N), Asn->Met (N), Asn->Phe (N), Asn->Pro (N), Asn->Ser (N), Asn->Thr (N), Asn->Trp (N), Asn->Tyr (N), Asn->Val (N), Asn->Xle (N), Asp->Ala (D), Asp->Arg (D), Asp->Asn (D), Asp->Cys (D), Asp->Gln (D), Asp->Glu (D), Asp->Gly (D), Asp->His (D), Asp->Lys (D), Asp->Met (D), Asp->Phe (D), Asp->Pro (D), Asp->Ser (D), Asp->Thr (D), Asp->Trp (D), Asp->Tyr (D), Asp->Val (D), Asp->Xle (D), Aspartylurea (H), Atto495Maleimide (C), AzidoF (F), azole (C), azole (S), Bacillosamine (N), BADGE (C), BDMAPP (H), BDMAPP (K), BDMAPP (Protein N-term), BDMAPP (W), BDMAPP (Y), BEMAD_C (C), BEMAD_C:2H(6) (C), BEMAD_ST (S), BEMAD_ST (T), BEMAD_ST:2H(6) (S), BEMAD_ST:2H(6) (T), Benzoyl (K), Benzoyl (N-term), benzylguanidine (K), betaFNA (C), betaFNA (K), BHT (C), BHT (H), BHT (K), BHTOH (C), BHTOH (H), BHTOH (K), Biotin (K), Biotin (N-term), Biotin-HPDP (C), Biotin-PEG-PRA (M), Biotin-PEO-Amine (D), Biotin-PEO-Amine (E), Biotin-PEO-Amine (Protein C-term), Biotin-phenacyl (C), Biotin-phenacyl (H), Biotin-phenacyl (S), Biotin-tyramide (C), Biotin-tyramide (W), Biotin-tyramide (Y), Biotin:Aha-DADPS (M), Biotin:Aha-PC (M), Biotin:Cayman-10013 (C), Biotin:Cayman-10141 (C), Biotin:Invitrogen-M1602 (C), Biotin:Sigma-B1267 (C), Biotin:Thermo-21325 (K), Biotin:Thermo-21328 (K), Biotin:Thermo-21328 (N-term), Biotin:Thermo-21330 (K), Biotin:Thermo-21330 (N-term), Biotin:Thermo-21345 (Q), Biotin:Thermo-21360 (X), Biotin:Thermo-21901+2H2O (C), Biotin:Thermo-21901+H2O (C), Biotin:Thermo-21911 (C), Biotin:Thermo-33033 (X), Biotin:Thermo-33033-H (X), Biotin:Thermo-88310 (K), Biotin:Thermo-88317 (S), Biotin:Thermo-88317 (Y), biotinAcrolein298 (C), biotinAcrolein298 (H), biotinAcrolein298 (K), biotinAcrolein298 (Protein N-term), BisANS (K), bisANS-sulfonates (K), bisANS-sulfonates (S), bisANS-sulfonates (T), BITC (C), BITC (K), BITC (N-term), BMP-piperidinol (C), BMP-piperidinol (M), Brij35 (N-term), Brij58 (N-term), Bromo (F), Bromo (H), Bromo (W), Bromo (Y), Bromobimane (C), Butyryl (K), C8-QAT (K), C8-QAT (N-term), CAF (N-term), CAMthiopropanoyl (K), CAMthiopropanoyl (Protein N-term), Can-FP-biotin (S), Can-FP-biotin (T), Can-FP-biotin (Y), Carbamidomethyl (C), Carbamidomethyl (D), Carbamidomethyl (E), Carbamidomethyl (H), Carbamidomethyl (K), Carbamidomethyl (M), Carbamidomethyl (N-term), Carbamidomethyl (S), Carbamidomethyl (T), Carbamidomethyl (U), Carbamidomethyl (Y), CarbamidomethylDTT (C), Carbamyl (C), Carbamyl (K), Carbamyl (M), Carbamyl (N-term), Carbamyl (Protein N-term), Carbamyl (R), Carbamyl (S), Carbamyl (T), Carbamyl (Y), Carbofuran (S), Carbonyl (A), Carbonyl (E), Carbonyl (I), Carbonyl (L), Carbonyl (Q), Carbonyl (R), Carbonyl (S), Carbonyl (V), Carboxy (D), Carboxy (E), Carboxy (K), Carboxy (Protein N-term M), Carboxy (W), Carboxy->Thiocarboxy (Protein C-term G), Carboxyethyl (H), Carboxyethyl (K), Carboxyethylpyrrole (K), Carboxymethyl (C), Carboxymethyl (K), Carboxymethyl (N-term), Carboxymethyl (U), Carboxymethyl (W), Carboxymethyl:13C(2) (C), CarboxymethylDMAP (N-term), CarboxymethylDTT (C), Cation:Ag (C-term), Cation:Ag (D), Cation:Ag (E), Cation:Al[III] (C-term), Cation:Al[III] (D), Cation:Al[III] (E), Cation:Ca[II] (C-term), Cation:Ca[II] (D), Cation:Ca[II] (E), Cation:Cu[I] (C-term), Cation:Cu[I] (D), Cation:Cu[I] (E), Cation:Cu[I] (H), Cation:Fe[II] (C-term), Cation:Fe[II] (D), Cation:Fe[II] (E), Cation:Fe[III] (C-term), Cation:Fe[III] (D), Cation:Fe[III] (E), Cation:K (C-term), Cation:K (D), Cation:K (E), Cation:Li (C-term), Cation:Li (D), Cation:Li (E), Cation:Mg[II] (C-term), Cation:Mg[II] (D), Cation:Mg[II] (E), Cation:Na (C-term), Cation:Na (D), Cation:Na (E), Cation:Ni[II] (C-term), Cation:Ni[II] (D), Cation:Ni[II] (E), Cation:Zn[II] (C-term), Cation:Zn[II] (D), Cation:Zn[II] (E), Cation:Zn[II] (H), cGMP (C), cGMP (S), cGMP+RMP-loss (C), cGMP+RMP-loss (S), CHDH (D), Chlorination (W), Chlorination (Y), Cholesterol (Protein C-term), CIGG (K), CLIP_TRAQ_2 (K), CLIP_TRAQ_2 (N-term), CLIP_TRAQ_2 (Y), CLIP_TRAQ_3 (K), CLIP_TRAQ_3 (N-term), CLIP_TRAQ_3 (Y), CLIP_TRAQ_4 (K), CLIP_TRAQ_4 (N-term), CLIP_TRAQ_4 (Y), CoenzymeA (C), Cresylphosphate (H), Cresylphosphate (K), Cresylphosphate (R), Cresylphosphate (S), Cresylphosphate (T), Cresylphosphate (Y), CresylSaligeninPhosphate (H), CresylSaligeninPhosphate (K), CresylSaligeninPhosphate (R), CresylSaligeninPhosphate (S), CresylSaligeninPhosphate (T), CresylSaligeninPhosphate (Y), Crotonaldehyde (C), Crotonaldehyde (H), Crotonaldehyde (K), Crotonyl (K), CuSMo (C), CUSTOM0 (A), CUSTOM0 (C), CUSTOM0 (C-term), CUSTOM0 (D), CUSTOM0 (E), CUSTOM0 (F), CUSTOM0 (G), CUSTOM0 (H), CUSTOM0 (I), CUSTOM0 (K), CUSTOM0 (L), CUSTOM0 (M), CUSTOM0 (N), CUSTOM0 (N-term), CUSTOM0 (P), CUSTOM0 (Q), CUSTOM0 (R), CUSTOM0 (S), CUSTOM0 (T), CUSTOM0 (V), CUSTOM0 (W), CUSTOM0 (Y), CUSTOM1 (A), CUSTOM1 (C), CUSTOM1 (C-term), CUSTOM1 (D), CUSTOM1 (E), CUSTOM1 (F), CUSTOM1 (G), CUSTOM1 (H), CUSTOM1 (I), CUSTOM1 (K), CUSTOM1 (L), CUSTOM1 (M), CUSTOM1 (N), CUSTOM1 (N-term), CUSTOM1 (P), CUSTOM1 (Q), CUSTOM1 (R), CUSTOM1 (S), CUSTOM1 (T), CUSTOM1 (V), CUSTOM1 (W), CUSTOM1 (Y), CUSTOM2 (A), CUSTOM2 (C), CUSTOM2 (C-term), CUSTOM2 (D), CUSTOM2 (E), CUSTOM2 (F), CUSTOM2 (G), CUSTOM2 (H), CUSTOM2 (I), CUSTOM2 (K), CUSTOM2 (L), CUSTOM2 (M), CUSTOM2 (N), CUSTOM2 (N-term), CUSTOM2 (P), CUSTOM2 (Q), CUSTOM2 (R), CUSTOM2 (S), CUSTOM2 (T), CUSTOM2 (V), CUSTOM2 (W), CUSTOM2 (Y), CUSTOM3 (A), CUSTOM3 (C), CUSTOM3 (C-term), CUSTOM3 (D), CUSTOM3 (E), CUSTOM3 (F), CUSTOM3 (G), CUSTOM3 (H), CUSTOM3 (I), CUSTOM3 (K), CUSTOM3 (L), CUSTOM3 (M), CUSTOM3 (N), CUSTOM3 (N-term), CUSTOM3 (P), CUSTOM3 (Q), CUSTOM3 (R), CUSTOM3 (S), CUSTOM3 (T), CUSTOM3 (V), CUSTOM3 (W), CUSTOM3 (Y), CUSTOM4 (A), CUSTOM4 (C), CUSTOM4 (C-term), CUSTOM4 (D), CUSTOM4 (E), CUSTOM4 (F), CUSTOM4 (G), CUSTOM4 (H), CUSTOM4 (I), CUSTOM4 (K), CUSTOM4 (L), CUSTOM4 (M), CUSTOM4 (N), CUSTOM4 (N-term), CUSTOM4 (P), CUSTOM4 (Q), CUSTOM4 (R), CUSTOM4 (S), CUSTOM4 (T), CUSTOM4 (V), CUSTOM4 (W), CUSTOM4 (Y), CUSTOM5 (A), CUSTOM5 (C), CUSTOM5 (C-term), CUSTOM5 (D), CUSTOM5 (E), CUSTOM5 (F), CUSTOM5 (G), CUSTOM5 (H), CUSTOM5 (I), CUSTOM5 (K), CUSTOM5 (L), CUSTOM5 (M), CUSTOM5 (N), CUSTOM5 (N-term), CUSTOM5 (P), CUSTOM5 (Q), CUSTOM5 (R), CUSTOM5 (S), CUSTOM5 (T), CUSTOM5 (V), CUSTOM5 (W), CUSTOM5 (Y), CUSTOM6 (A), CUSTOM6 (C), CUSTOM6 (C-term), CUSTOM6 (D), CUSTOM6 (E), CUSTOM6 (F), CUSTOM6 (G), CUSTOM6 (H), CUSTOM6 (I), CUSTOM6 (K), CUSTOM6 (L), CUSTOM6 (M), CUSTOM6 (N), CUSTOM6 (N-term), CUSTOM6 (P), CUSTOM6 (Q), CUSTOM6 (R), CUSTOM6 (S), CUSTOM6 (T), CUSTOM6 (V), CUSTOM6 (W), CUSTOM6 (Y), CUSTOM7 (A), CUSTOM7 (C), CUSTOM7 (C-term), CUSTOM7 (D), CUSTOM7 (E), CUSTOM7 (F), CUSTOM7 (G), CUSTOM7 (H), CUSTOM7 (I), CUSTOM7 (K), CUSTOM7 (L), CUSTOM7 (M), CUSTOM7 (N), CUSTOM7 (N-term), CUSTOM7 (P), CUSTOM7 (Q), CUSTOM7 (R), CUSTOM7 (S), CUSTOM7 (T), CUSTOM7 (V), CUSTOM7 (W), CUSTOM7 (Y), CUSTOM8 (A), CUSTOM8 (C), CUSTOM8 (C-term), CUSTOM8 (D), CUSTOM8 (E), CUSTOM8 (F), CUSTOM8 (G), CUSTOM8 (H), CUSTOM8 (I), CUSTOM8 (K), CUSTOM8 (L), CUSTOM8 (M), CUSTOM8 (N), CUSTOM8 (N-term), CUSTOM8 (P), CUSTOM8 (Q), CUSTOM8 (R), CUSTOM8 (S), CUSTOM8 (T), CUSTOM8 (V), CUSTOM8 (W), CUSTOM8 (Y), CUSTOM9 (A), CUSTOM9 (C), CUSTOM9 (C-term), CUSTOM9 (D), CUSTOM9 (E), CUSTOM9 (F), CUSTOM9 (G), CUSTOM9 (H), CUSTOM9 (I), CUSTOM9 (K), CUSTOM9 (L), CUSTOM9 (M), CUSTOM9 (N), CUSTOM9 (N-term), CUSTOM9 (P), CUSTOM9 (Q), CUSTOM9 (R), CUSTOM9 (S), CUSTOM9 (T), CUSTOM9 (V), CUSTOM9 (W), CUSTOM9 (Y), Cy3-maleimide (C), Cy3b-maleimide (C), Cyano (C), CyDye-Cy3 (C), CyDye-Cy5 (C), Cys->Ala (C), Cys->Arg (C), Cys->Asn (C), Cys->Asp (C), Cys->CamSec (C), Cys->Dha (C), Cys->ethylaminoAla (C), Cys->Gln (C), Cys->Glu (C), Cys->Gly (C), Cys->His (C), Cys->Lys (C), Cys->Met (C), Cys->methylaminoAla (C), Cys->Oxoalanine (C), Cys->Phe (C), Cys->Pro (C), Cys->PyruvicAcid (Protein N-term C), Cys->SecNEM (C), Cys->SecNEM:2H(5) (C), Cys->Ser (C), Cys->Thr (C), Cys->Trp (C), Cys->Tyr (C), Cys->Val (C), Cys->Xle (C), Cysteinyl (C), cysTMT (C), cysTMT6plex (C), Cytopiloyne (C), Cytopiloyne (K), Cytopiloyne (N-term), Cytopiloyne (P), Cytopiloyne (R), Cytopiloyne (S), Cytopiloyne (Y), Cytopiloyne+water (C), Cytopiloyne+water (K), Cytopiloyne+water (N-term), Cytopiloyne+water (R), Cytopiloyne+water (S), Cytopiloyne+water (T), Cytopiloyne+water (Y), DABCYL-C2-maleimide (C), DABCYL-C2-maleimide (K), DAET (S), DAET (T), Dansyl (K), Dansyl (N-term), Dap-DSP (A), Dap-DSP (E), Dap-DSP (K), DBIA (C), DCP (C), Deamidated (N), Deamidated (Protein N-term F), Deamidated (Q), Deamidated (R), Deamidated:18O(1) (N), Deamidated:18O(1) (Q), Decanoyl (S), Decanoyl (T), Decarboxylation (D), Decarboxylation (E), DEDGFLYMVYASQETFG (K), Dehydrated (D), Dehydrated (N-term C), Dehydrated (Protein C-term N), Dehydrated (Protein C-term Q), Dehydrated (S), Dehydrated (T), Dehydrated (Y), Dehydro (C), Delta:H(-1)N(-1)18O(1) (N), Delta:H(-4)O(2) (W), Delta:H(-4)O(3) (W), Delta:H(10)C(8)O(1) (K), Delta:H(2)C(2) (H), Delta:H(2)C(2) (K), Delta:H(2)C(2) (N-term), Delta:H(2)C(2) (Protein N-term), Delta:H(2)C(3) (K), Delta:H(2)C(3)O(1) (K), Delta:H(2)C(3)O(1) (R), Delta:H(2)C(5) (K), Delta:H(4)C(2) (H), Delta:H(4)C(2) (K), Delta:H(4)C(2) (N-term), Delta:H(4)C(2)O(-1)S(1) (S), Delta:H(4)C(3) (H), Delta:H(4)C(3) (K), Delta:H(4)C(3) (Protein N-term), Delta:H(4)C(3)O(1) (C), Delta:H(4)C(3)O(1) (H), Delta:H(4)C(3)O(1) (K), Delta:H(4)C(3)O(1) (R), Delta:H(4)C(3)O(2) (K), Delta:H(4)C(5)O(1) (R), Delta:H(4)C(6) (K), Delta:H(5)C(2) (P), Delta:H(6)C(3)O(1) (C), Delta:H(6)C(3)O(1) (H), Delta:H(6)C(3)O(1) (K), Delta:H(6)C(3)O(1) (Protein N-term), Delta:H(6)C(6)O(1) (K), Delta:H(6)C(7)O(4) (R), Delta:H(8)C(6)O(1) (K), Delta:H(8)C(6)O(1) (Protein N-term), Delta:H(8)C(6)O(2) (K), Delta:Hg(1) (C), Delta:O(4) (W), Delta:S(-1)Se(1) (C), Delta:S(-1)Se(1) (M), Delta:Se(1) (C), Deoxy (D), Deoxy (S), Deoxy (T), Deoxyhypusine (K), Deoxyhypusine (Q), DeStreak (C), Dethiomethyl (M), dHex (N), dHex (S), dHex (T), dHex(1)Hex(1) (S), dHex(1)Hex(1) (T), dHex(1)Hex(1)HexA(1)HexNAc(3) (S), dHex(1)Hex(1)HexA(1)HexNAc(3) (T), dHex(1)Hex(1)HexNAc(1)Kdn(1) (S), dHex(1)Hex(1)HexNAc(1)Kdn(1) (T), dHex(1)Hex(1)HexNAc(1)NeuAc(1) (S), dHex(1)Hex(1)HexNAc(1)NeuAc(1) (T), dHex(1)Hex(1)HexNAc(1)NeuGc(1) (S), dHex(1)Hex(1)HexNAc(1)NeuGc(1) (T), dHex(1)Hex(1)HexNAc(2)Kdn(1) (S), dHex(1)Hex(1)HexNAc(2)Kdn(1) (T), dHex(1)Hex(1)HexNAc(2)NeuAc(1) (S), dHex(1)Hex(1)HexNAc(2)NeuAc(1) (T), dHex(1)Hex(1)HexNAc(2)NeuAc(1)Sulf(1) (S), dHex(1)Hex(1)HexNAc(2)NeuAc(1)Sulf(1) (T), dHex(1)Hex(1)HexNAc(2)NeuAc(2) (S), dHex(1)Hex(1)HexNAc(2)NeuAc(2) (T), dHex(1)Hex(1)HexNAc(2)Sulf(1) (S), dHex(1)Hex(1)HexNAc(2)Sulf(1) (T), dHex(1)Hex(1)HexNAc(3) (S), dHex(1)Hex(1)HexNAc(3) (T), dHex(1)Hex(1)HexNAc(3)NeuAc(1) (S), dHex(1)Hex(1)HexNAc(3)NeuAc(1) (T), dHex(1)Hex(1)HexNAc(3)NeuAc(1)Sulf(1) (S), dHex(1)Hex(1)HexNAc(3)NeuAc(1)Sulf(1) (T), dHex(1)Hex(1)HexNAc(3)NeuGc(1) (S), dHex(1)Hex(1)HexNAc(3)NeuGc(1) (T), dHex(1)Hex(1)HexNAc(3)Sulf(1) (S), dHex(1)Hex(1)HexNAc(3)Sulf(1) (T), dHex(1)Hex(1)HexNAc(4) (S), dHex(1)Hex(1)HexNAc(4) (T), dHex(1)Hex(2) (S), dHex(1)Hex(2) (T), dHex(1)Hex(2)HexA(1) (S), dHex(1)Hex(2)HexA(1) (T), dHex(1)Hex(2)HexA(1)HexNAc(1) (S), dHex(1)Hex(2)HexA(1)HexNAc(1) (T), dHex(1)Hex(2)HexA(1)HexNAc(1)Sulf(1) (S), dHex(1)Hex(2)HexA(1)HexNAc(1)Sulf(1) (T), dHex(1)Hex(2)HexA(1)HexNAc(2) (S), dHex(1)Hex(2)HexA(1)HexNAc(2) (T), dHex(1)Hex(2)HexNAc(1) (S), dHex(1)Hex(2)HexNAc(1) (T), dHex(1)Hex(2)HexNAc(1)NeuAc(2) (S), dHex(1)Hex(2)HexNAc(1)NeuAc(2) (T), dHex(1)Hex(2)HexNAc(1)Sulf(1) (S), dHex(1)Hex(2)HexNAc(1)Sulf(1) (T), dHex(1)Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (S), dHex(1)Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (T), dHex(1)Hex(2)HexNAc(2)NeuAc(2) (S), dHex(1)Hex(2)HexNAc(2)NeuAc(2) (T), dHex(1)Hex(2)HexNAc(2)NeuAc(2)Sulf(1) (S), dHex(1)Hex(2)HexNAc(2)NeuAc(2)Sulf(1) (T), dHex(1)Hex(2)HexNAc(2)NeuGc(1) (N), dHex(1)Hex(2)HexNAc(2)NeuGc(1) (S), dHex(1)Hex(2)HexNAc(2)NeuGc(1) (T), dHex(1)Hex(2)HexNAc(2)NeuGc(2) (S), dHex(1)Hex(2)HexNAc(2)NeuGc(2) (T), dHex(1)Hex(2)HexNAc(2)NeuGc(3) (S), dHex(1)Hex(2)HexNAc(2)NeuGc(3) (T), dHex(1)Hex(2)HexNAc(2)Pent(1) (N), dHex(1)Hex(2)HexNAc(2)Sulf(1) (S), dHex(1)Hex(2)HexNAc(2)Sulf(1) (T), dHex(1)Hex(2)HexNAc(3) (N), dHex(1)Hex(2)HexNAc(3) (S), dHex(1)Hex(2)HexNAc(3) (T), dHex(1)Hex(2)HexNAc(3)NeuAc(1) (S), dHex(1)Hex(2)HexNAc(3)NeuAc(1) (T), dHex(1)Hex(2)HexNAc(3)NeuAc(1)Sulf(1) (S), dHex(1)Hex(2)HexNAc(3)NeuAc(1)Sulf(1) (T), dHex(1)Hex(2)HexNAc(3)Sulf(1) (S), dHex(1)Hex(2)HexNAc(3)Sulf(1) (T), dHex(1)Hex(2)HexNAc(4) (N), dHex(1)Hex(2)HexNAc(4) (S), dHex(1)Hex(2)HexNAc(4) (T), dHex(1)Hex(2)HexNAc(4)NeuAc(1) (S), dHex(1)Hex(2)HexNAc(4)NeuAc(1) (T), dHex(1)Hex(2)HexNAc(4)NeuAc(2) (S), dHex(1)Hex(2)HexNAc(4)NeuAc(2) (T), dHex(1)Hex(2)HexNAc(4)Sulf(2) (S), dHex(1)Hex(2)HexNAc(4)Sulf(2) (T), dHex(1)Hex(3) (S), dHex(1)Hex(3) (T), dHex(1)Hex(3)HexA(1)HexNAc(1) (S), dHex(1)Hex(3)HexA(1)HexNAc(1) (T), dHex(1)Hex(3)HexA(1)HexNAc(1)Sulf(1) (S), dHex(1)Hex(3)HexA(1)HexNAc(1)Sulf(1) (T), dHex(1)Hex(3)HexA(1)HexNAc(2) (S), dHex(1)Hex(3)HexA(1)HexNAc(2) (T), dHex(1)Hex(3)HexA(1)HexNAc(2)Sulf(1) (S), dHex(1)Hex(3)HexA(1)HexNAc(2)Sulf(1) (T), dHex(1)Hex(3)HexA(1)HexNAc(3)Sulf(1) (S), dHex(1)Hex(3)HexA(1)HexNAc(3)Sulf(1) (T), dHex(1)Hex(3)HexA(2)HexNAc(2) (S), dHex(1)Hex(3)HexA(2)HexNAc(2) (T), dHex(1)Hex(3)HexNAc(1) (S), dHex(1)Hex(3)HexNAc(1) (T), dHex(1)Hex(3)HexNAc(1)Sulf(1) (S), dHex(1)Hex(3)HexNAc(1)Sulf(1) (T), dHex(1)Hex(3)HexNAc(2) (N), dHex(1)Hex(3)HexNAc(2) (S), dHex(1)Hex(3)HexNAc(2) (T), dHex(1)Hex(3)HexNAc(2)NeuGc(1) (S), dHex(1)Hex(3)HexNAc(2)NeuGc(1) (T), dHex(1)Hex(3)HexNAc(2)Pent(1) (N), dHex(1)Hex(3)HexNAc(2)Sulf(1) (N), dHex(1)Hex(3)HexNAc(2)Sulf(1) (S), dHex(1)Hex(3)HexNAc(2)Sulf(1) (T), dHex(1)Hex(3)HexNAc(3) (N), dHex(1)Hex(3)HexNAc(3) (S), dHex(1)Hex(3)HexNAc(3) (T), dHex(1)Hex(3)HexNAc(3)NeuAc(2) (S), dHex(1)Hex(3)HexNAc(3)NeuAc(2) (T), dHex(1)Hex(3)HexNAc(3)Pent(1) (N), dHex(1)Hex(3)HexNAc(3)Pent(2) (N), dHex(1)Hex(3)HexNAc(3)Pent(3) (N), dHex(1)Hex(3)HexNAc(3)Sulf(1) (S), dHex(1)Hex(3)HexNAc(3)Sulf(1) (T), dHex(1)Hex(3)HexNAc(4) (N), dHex(1)Hex(3)HexNAc(4) (S), dHex(1)Hex(3)HexNAc(4) (T), dHex(1)Hex(3)HexNAc(4)NeuAc(1) (N), dHex(1)Hex(3)HexNAc(4)Pent(1) (N), dHex(1)Hex(3)HexNAc(4)Pent(2) (N), dHex(1)Hex(3)HexNAc(4)Pent(3) (N), dHex(1)Hex(3)HexNAc(4)Sulf(1) (N), dHex(1)Hex(3)HexNAc(5) (N), dHex(1)Hex(3)HexNAc(5) (S), dHex(1)Hex(3)HexNAc(5) (T), dHex(1)Hex(3)HexNAc(5)NeuAc(1) (N), dHex(1)Hex(3)HexNAc(5)NeuAc(1) (S), dHex(1)Hex(3)HexNAc(5)NeuAc(1) (T), dHex(1)Hex(3)HexNAc(5)Sulf(1) (N), dHex(1)Hex(3)HexNAc(6) (N), dHex(1)Hex(3)HexNAc(6) (S), dHex(1)Hex(3)HexNAc(6) (T), dHex(1)Hex(3)HexNAc(6)Sulf(1) (N), dHex(1)Hex(4) (S), dHex(1)Hex(4) (T), dHex(1)Hex(4)HexA(1) (S), dHex(1)Hex(4)HexA(1) (T), dHex(1)Hex(4)HexA(1)HexNAc(2) (S), dHex(1)Hex(4)HexA(1)HexNAc(2) (T), dHex(1)Hex(4)HexA(1)HexNAc(3)Sulf(1) (S), dHex(1)Hex(4)HexA(1)HexNAc(3)Sulf(1) (T), dHex(1)Hex(4)HexNAc(1)Pent(1) (N), dHex(1)Hex(4)HexNAc(2) (N), dHex(1)Hex(4)HexNAc(2) (S), dHex(1)Hex(4)HexNAc(2) (T), dHex(1)Hex(4)HexNAc(2)Pent(1) (N), dHex(1)Hex(4)HexNAc(3) (N), dHex(1)Hex(4)HexNAc(3)NeuAc(1) (N), dHex(1)Hex(4)HexNAc(3)NeuAc(1) (S), dHex(1)Hex(4)HexNAc(3)NeuAc(1) (T), dHex(1)Hex(4)HexNAc(3)NeuAc(1)Sulf(1) (N), dHex(1)Hex(4)HexNAc(3)NeuGc(1) (N), dHex(1)Hex(4)HexNAc(3)Pent(1) (N), dHex(1)Hex(4)HexNAc(3)Sulf(1) (N), dHex(1)Hex(4)HexNAc(4) (N), dHex(1)Hex(4)HexNAc(4) (S), dHex(1)Hex(4)HexNAc(4) (T), dHex(1)Hex(4)HexNAc(4)NeuAc(1) (N), dHex(1)Hex(4)HexNAc(4)NeuAc(1) (S), dHex(1)Hex(4)HexNAc(4)NeuAc(1) (T), dHex(1)Hex(4)HexNAc(4)NeuAc(1)Sulf(1) (N), dHex(1)Hex(4)HexNAc(4)Pent(1) (N), dHex(1)Hex(4)HexNAc(4)Sulf(1) (N), dHex(1)Hex(4)HexNAc(5) (N), dHex(1)Hex(4)HexNAc(5)Sulf(1) (N), dHex(1)Hex(5) (S), dHex(1)Hex(5) (T), dHex(1)Hex(5)HexA(1)HexNAc(3)Sulf(1) (N), dHex(1)Hex(5)HexA(1)HexNAc(3)Sulf(2) (N), dHex(1)Hex(5)HexNAc(2) (N), dHex(1)Hex(5)HexNAc(2)Pent(1) (N), dHex(1)Hex(5)HexNAc(3) (N), dHex(1)Hex(5)HexNAc(3)NeuAc(1) (N), dHex(1)Hex(5)HexNAc(3)NeuAc(1)Sulf(1) (N), dHex(1)Hex(5)HexNAc(3)NeuGc(1) (N), dHex(1)Hex(5)HexNAc(3)NeuGc(1)Sulf(1) (N), dHex(1)Hex(5)HexNAc(3)Sulf(1) (N), dHex(1)Hex(5)HexNAc(4) (N), dHex(1)Hex(5)HexNAc(4)Me(2)Pent(1) (N), dHex(1)Hex(5)HexNAc(4)NeuAc(1) (N), dHex(1)Hex(5)HexNAc(4)NeuAc(2) (N), dHex(1)Hex(5)HexNAc(4)Pent(1) (N), dHex(1)Hex(5)HexNAc(4)Sulf(1) (N), dHex(1)Hex(5)HexNAc(4)Sulf(2) (N), dHex(1)Hex(5)HexNAc(5) (N), dHex(1)Hex(6) (S), dHex(1)Hex(6) (T), dHex(1)Hex(6)HexNAc(2) (N), dHex(1)Hex(6)HexNAc(3) (N), dHex(1)Hex(6)HexNAc(3)Sulf(1) (N), dHex(1)Hex(6)HexNAc(4) (N), dHex(1)Hex(7)HexNAc(2) (N), dHex(1)Hex(7)HexNAc(3) (N), dHex(1)Hex(7)HexNAc(3)Phos(1) (N), dHex(1)Hex(7)HexNAc(3)Sulf(1) (N), dHex(1)Hex(7)HexNAc(4) (N), dHex(1)Hex(8)HexNAc(2) (N), dHex(1)HexNAc(3) (S), dHex(1)HexNAc(3) (T), dHex(1)HexNAc(4) (S), dHex(1)HexNAc(4) (T), dHex(1)HexNAc(5) (S), dHex(1)HexNAc(5) (T), dHex(2)Hex(1)HexNAc(1)Kdn(1) (S), dHex(2)Hex(1)HexNAc(1)Kdn(1) (T), dHex(2)Hex(1)HexNAc(2)Kdn(1) (S), dHex(2)Hex(1)HexNAc(2)Kdn(1) (T), dHex(2)Hex(1)HexNAc(2)NeuAc(1) (S), dHex(2)Hex(1)HexNAc(2)NeuAc(1) (T), dHex(2)Hex(1)HexNAc(2)NeuGc(1) (S), dHex(2)Hex(1)HexNAc(2)NeuGc(1) (T), dHex(2)Hex(1)HexNAc(3) (S), dHex(2)Hex(1)HexNAc(3) (T), dHex(2)Hex(1)HexNAc(4)Sulf(1) (S), dHex(2)Hex(1)HexNAc(4)Sulf(1) (T), dHex(2)Hex(2) (S), dHex(2)Hex(2) (T), dHex(2)Hex(2)HexA(1) (S), dHex(2)Hex(2)HexA(1) (T), dHex(2)Hex(2)HexA(1)HexNAc(1) (S), dHex(2)Hex(2)HexA(1)HexNAc(1) (T), dHex(2)Hex(2)HexA(1)HexNAc(2)Sulf(1) (S), dHex(2)Hex(2)HexA(1)HexNAc(2)Sulf(1) (T), dHex(2)Hex(2)HexNAc(1) (S), dHex(2)Hex(2)HexNAc(1) (T), dHex(2)Hex(2)HexNAc(2) (N), dHex(2)Hex(2)HexNAc(2) (S), dHex(2)Hex(2)HexNAc(2) (T), dHex(2)Hex(2)HexNAc(2)Kdn(1) (S), dHex(2)Hex(2)HexNAc(2)Kdn(1) (T), dHex(2)Hex(2)HexNAc(2)NeuAc(1) (S), dHex(2)Hex(2)HexNAc(2)NeuAc(1) (T), dHex(2)Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (S), dHex(2)Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (T), dHex(2)Hex(2)HexNAc(2)NeuGc(1) (S), dHex(2)Hex(2)HexNAc(2)NeuGc(1) (T), dHex(2)Hex(2)HexNAc(2)Sulf(1) (S), dHex(2)Hex(2)HexNAc(2)Sulf(1) (T), dHex(2)Hex(2)HexNAc(2)Sulf(2) (S), dHex(2)Hex(2)HexNAc(2)Sulf(2) (T), dHex(2)Hex(2)HexNAc(3) (N), dHex(2)Hex(2)HexNAc(3) (S), dHex(2)Hex(2)HexNAc(3) (T), dHex(2)Hex(2)HexNAc(3)NeuAc(1) (S), dHex(2)Hex(2)HexNAc(3)NeuAc(1) (T), dHex(2)Hex(2)HexNAc(3)NeuGc(1) (S), dHex(2)Hex(2)HexNAc(3)NeuGc(1) (T), dHex(2)Hex(2)HexNAc(3)Sulf(1) (S), dHex(2)Hex(2)HexNAc(3)Sulf(1) (T), dHex(2)Hex(2)HexNAc(4) (S), dHex(2)Hex(2)HexNAc(4) (T), dHex(2)Hex(2)HexNAc(4)Sulf(2) (S), dHex(2)Hex(2)HexNAc(4)Sulf(2) (T), dHex(2)Hex(2)HexNAc(5) (S), dHex(2)Hex(2)HexNAc(5) (T), dHex(2)Hex(2)HexNAc(6)Sulf(1) (S), dHex(2)Hex(2)HexNAc(6)Sulf(1) (T), dHex(2)Hex(3) (S), dHex(2)Hex(3) (T), dHex(2)Hex(3)HexA(1)HexNAc(1)Sulf(1) (S), dHex(2)Hex(3)HexA(1)HexNAc(1)Sulf(1) (T), dHex(2)Hex(3)HexA(1)HexNAc(2)Sulf(1) (S), dHex(2)Hex(3)HexA(1)HexNAc(2)Sulf(1) (T), dHex(2)Hex(3)HexA(1)HexNAc(3)Sulf(1) (S), dHex(2)Hex(3)HexA(1)HexNAc(3)Sulf(1) (T), dHex(2)Hex(3)HexNAc(1)Sulf(1) (S), dHex(2)Hex(3)HexNAc(1)Sulf(1) (T), dHex(2)Hex(3)HexNAc(2) (N), dHex(2)Hex(3)HexNAc(2) (S), dHex(2)Hex(3)HexNAc(2) (T), dHex(2)Hex(3)HexNAc(2)NeuGc(1) (S), dHex(2)Hex(3)HexNAc(2)NeuGc(1) (T), dHex(2)Hex(3)HexNAc(2)Sulf(1) (S), dHex(2)Hex(3)HexNAc(2)Sulf(1) (T), dHex(2)Hex(3)HexNAc(3) (N), dHex(2)Hex(3)HexNAc(3) (S), dHex(2)Hex(3)HexNAc(3) (T), dHex(2)Hex(3)HexNAc(3)NeuAc(1) (S), dHex(2)Hex(3)HexNAc(3)NeuAc(1) (T), dHex(2)Hex(3)HexNAc(3)NeuAc(2) (S), dHex(2)Hex(3)HexNAc(3)NeuAc(2) (T), dHex(2)Hex(3)HexNAc(3)Pent(1) (N), dHex(2)Hex(3)HexNAc(3)Pent(2) (N), dHex(2)Hex(3)HexNAc(3)Sulf(1) (S), dHex(2)Hex(3)HexNAc(3)Sulf(1) (T), dHex(2)Hex(3)HexNAc(4) (N), dHex(2)Hex(3)HexNAc(4) (S), dHex(2)Hex(3)HexNAc(4) (T), dHex(2)Hex(3)HexNAc(4)NeuAc(1) (N), dHex(2)Hex(3)HexNAc(4)Pent(1) (N), dHex(2)Hex(3)HexNAc(4)Pent(2) (N), dHex(2)Hex(3)HexNAc(5) (N), dHex(2)Hex(3)HexNAc(5) (S), dHex(2)Hex(3)HexNAc(5) (T), dHex(2)Hex(3)HexNAc(6) (N), dHex(2)Hex(4) (S), dHex(2)Hex(4) (T), dHex(2)Hex(4)HexA(1)HexNAc(3)Sulf(1) (S), dHex(2)Hex(4)HexA(1)HexNAc(3)Sulf(1) (T), dHex(2)Hex(4)HexNAc(1) (S), dHex(2)Hex(4)HexNAc(1) (T), dHex(2)Hex(4)HexNAc(2) (N), dHex(2)Hex(4)HexNAc(2) (S), dHex(2)Hex(4)HexNAc(2) (T), dHex(2)Hex(4)HexNAc(3) (N), dHex(2)Hex(4)HexNAc(3)NeuAc(1)Sulf(1) (N), dHex(2)Hex(4)HexNAc(3)Pent(1) (N), dHex(2)Hex(4)HexNAc(4) (N), dHex(2)Hex(4)HexNAc(4) (S), dHex(2)Hex(4)HexNAc(4) (T), dHex(2)Hex(4)HexNAc(4)Pent(1) (N), dHex(2)Hex(4)HexNAc(4)Sulf(1) (N), dHex(2)Hex(4)HexNAc(5) (N), dHex(2)Hex(4)HexNAc(5) (S), dHex(2)Hex(4)HexNAc(5) (T), dHex(2)Hex(5)HexNAc(2)Me(1) (S), dHex(2)Hex(5)HexNAc(2)Me(1) (T), dHex(2)Hex(5)HexNAc(3)Pent(1) (N), dHex(2)Hex(5)HexNAc(4) (N), dHex(2)HexNAc(2)Kdn(1) (S), dHex(2)HexNAc(2)Kdn(1) (T), dHex(2)HexNAc(5) (S), dHex(2)HexNAc(5) (T), dHex(2)HexNAc(7) (S), dHex(2)HexNAc(7) (T), dHex(3)Hex(1)HexNAc(2)Kdn(1) (S), dHex(3)Hex(1)HexNAc(2)Kdn(1) (T), dHex(3)Hex(1)HexNAc(3)Kdn(1) (S), dHex(3)Hex(1)HexNAc(3)Kdn(1) (T), dHex(3)Hex(2)HexA(1)HexNAc(2)Sulf(1) (S), dHex(3)Hex(2)HexA(1)HexNAc(2)Sulf(1) (T), dHex(3)Hex(2)HexNAc(2) (S), dHex(3)Hex(2)HexNAc(2) (T), dHex(3)Hex(2)HexNAc(2)Kdn(1) (S), dHex(3)Hex(2)HexNAc(2)Kdn(1) (T), dHex(3)Hex(2)HexNAc(3) (S), dHex(3)Hex(2)HexNAc(3) (T), dHex(3)Hex(2)HexNAc(3)Kdn(1) (S), dHex(3)Hex(2)HexNAc(3)Kdn(1) (T), dHex(3)Hex(2)HexNAc(4) (S), dHex(3)Hex(2)HexNAc(4) (T), dHex(3)Hex(2)HexNAc(4)Sulf(2) (S), dHex(3)Hex(2)HexNAc(4)Sulf(2) (T), dHex(3)Hex(3)HexNAc(1) (S), dHex(3)Hex(3)HexNAc(1) (T), dHex(3)Hex(3)HexNAc(2) (S), dHex(3)Hex(3)HexNAc(2) (T), dHex(3)Hex(3)HexNAc(3) (S), dHex(3)Hex(3)HexNAc(3) (T), dHex(3)Hex(3)HexNAc(3)NeuAc(1) (S), dHex(3)Hex(3)HexNAc(3)NeuAc(1) (T), dHex(3)Hex(3)HexNAc(3)Pent(1) (N), dHex(3)Hex(3)HexNAc(4) (N), dHex(3)Hex(3)HexNAc(4)Pent(1) (N), dHex(3)Hex(4)HexNAc(4) (N), dHex(3)Hex(4)HexNAc(4) (S), dHex(3)Hex(4)HexNAc(4) (T), dHex(3)Hex(4)HexNAc(4)Sulf(1) (N), dHex(3)HexNAc(3)Kdn(1) (S), dHex(3)HexNAc(3)Kdn(1) (T), dHex(4)Hex(1)HexNAc(1)Kdn(2) (S), dHex(4)Hex(1)HexNAc(1)Kdn(2) (T), dHex(4)Hex(1)HexNAc(2)Kdn(1) (S), dHex(4)Hex(1)HexNAc(2)Kdn(1) (T), dHex(4)Hex(1)HexNAc(3)Kdn(1) (S), dHex(4)Hex(1)HexNAc(3)Kdn(1) (T), dHex(4)Hex(2)HexNAc(2)Kdn(1) (S), dHex(4)Hex(2)HexNAc(2)Kdn(1) (T), dHex(4)Hex(2)HexNAc(3) (S), dHex(4)Hex(2)HexNAc(3) (T), dHex(4)Hex(3)HexNAc(2)NeuAc(1) (S), dHex(4)Hex(3)HexNAc(2)NeuAc(1) (T), dHex(4)Hex(3)HexNAc(3) (S), dHex(4)Hex(3)HexNAc(3) (T), dHex(4)HexNAc(3)Kdn(1) (S), dHex(4)HexNAc(3)Kdn(1) (T), DHP (C), Di_L-Gln_Ngamma-propargyl-L-Gln_desthiobiotin (D), Di_L-Gln_Ngamma-propargyl-L-Gln_desthiobiotin (E), Di_L-Glu_Ngamma-propargyl-L-Gln_desthiobiotin (D), Di_L-Glu_Ngamma-propargyl-L-Gln_desthiobiotin (E), Diacylglycerol (C), DiART6plex (K), DiART6plex (N-term), DiART6plex (Protein N-term), DiART6plex (Y), DiART6plex115 (K), DiART6plex115 (N-term), DiART6plex115 (Protein N-term), DiART6plex115 (Y), DiART6plex116/119 (K), DiART6plex116/119 (N-term), DiART6plex116/119 (Protein N-term), DiART6plex116/119 (Y), DiART6plex117 (K), DiART6plex117 (N-term), DiART6plex117 (Protein N-term), DiART6plex117 (Y), DiART6plex118 (K), DiART6plex118 (N-term), DiART6plex118 (Protein N-term), DiART6plex118 (Y), Dibromo (Y), Dicarbamidomethyl (C), Dicarbamidomethyl (H), Dicarbamidomethyl (K), Dicarbamidomethyl (N-term), Dicarbamidomethyl (R), dichlorination (C), dichlorination (Y), Didehydro (C-term K), Didehydro (S), Didehydro (T), Didehydro (Y), Didehydroretinylidene (K), Diethyl (K), Diethyl (N-term), Diethylphosphate (C), Diethylphosphate (H), Diethylphosphate (K), Diethylphosphate (N-term), Diethylphosphate (S), Diethylphosphate (T), Diethylphosphate (Y), Diethylphosphothione (C), Diethylphosphothione (H), Diethylphosphothione (K), Diethylphosphothione (S), Diethylphosphothione (T), Diethylphosphothione (Y), Difuran (Y), Dihydroxyimidazolidine (R), Diiodo (H), Diiodo (Y), Diironsubcluster (C), Diisopropylphosphate (K), Diisopropylphosphate (N-term), Diisopropylphosphate (S), Diisopropylphosphate (T), Diisopropylphosphate (Y), DiLeu4plex (K), DiLeu4plex (N-term), DiLeu4plex (Y), DiLeu4plex115 (K), DiLeu4plex115 (N-term), DiLeu4plex115 (Y), DiLeu4plex117 (K), DiLeu4plex117 (N-term), DiLeu4plex117 (Y), DiLeu4plex118 (K), DiLeu4plex118 (N-term), DiLeu4plex118 (Y), Dimethyl (K), Dimethyl (N), Dimethyl (N-term), Dimethyl (Protein N-term P), Dimethyl (Protein N-term), Dimethyl (R), Dimethyl:2H(2)13C (K), Dimethyl:2H(2)13C (N), Dimethyl:2H(2)13C (N-term), Dimethyl:2H(2)13C (Protein N-term P), Dimethyl:2H(2)13C (R), Dimethyl:2H(4) (K), Dimethyl:2H(4) (N-term), Dimethyl:2H(4) (Protein N-term), Dimethyl:2H(4) (R), Dimethyl:2H(4)13C(2) (K), Dimethyl:2H(4)13C(2) (N-term), Dimethyl:2H(4)13C(2) (Protein N-term), Dimethyl:2H(4)13C(2) (R), Dimethyl:2H(6) (K), Dimethyl:2H(6) (N-term), Dimethyl:2H(6) (R), Dimethyl:2H(6)13C(2) (K), Dimethyl:2H(6)13C(2) (N-term), Dimethyl:2H(6)13C(2) (Protein N-term), Dimethyl:2H(6)13C(2) (R), DimethylamineGMBS (C), Dimethylaminoethyl (C), DimethylArsino (C), Dimethylphosphothione (C), Dimethylphosphothione (H), Dimethylphosphothione (K), Dimethylphosphothione (S), Dimethylphosphothione (T), Dimethylphosphothione (Y), DimethylpyrroleAdduct (K), Dioxidation (C), Dioxidation (E), Dioxidation (F), Dioxidation (I), Dioxidation (K), Dioxidation (L), Dioxidation (M), Dioxidation (P), Dioxidation (R), Dioxidation (U), Dioxidation (V), Dioxidation (W), Dioxidation (Y), Diphthamide (H), Dipyridyl (C), Dipyrrolylmethanemethyl (C), DMPO (C), DMPO (H), DMPO (Y), DNCB_hapten (C), DNCB_hapten (H), DNCB_hapten (K), DNCB_hapten (Y), dNIC (K), dNIC (N-term), DNPS (C), DNPS (W), DPIA (C), DTT (C), DVFQQQTGG (K), DyLight-maleimide (C), DYn-2 (C), EDEDTIDVFQQQTGG (K), EDT-iodoacetyl-PEO-biotin (S), EDT-iodoacetyl-PEO-biotin (T), EDT-maleimide-PEO-biotin (S), EDT-maleimide-PEO-biotin (T), EEEDVIEVYQEQTGG (K), EGCG1 (C), EGCG2 (C), EHD-diphenylpentanone (C), EHD-diphenylpentanone (M), EQAT (C), EQAT:2H(5) (C), EQIGG (K), ESP (K), ESP (N-term), ESP:2H(10) (K), ESP:2H(10) (N-term), Ethanedithiol (S), Ethanedithiol (T), Ethanolamine (C), Ethanolamine (C-term), Ethanolamine (D), Ethanolamine (E), Ethanolyl (C), Ethanolyl (K), Ethanolyl (R), Ethyl (C-term), Ethyl (D), Ethyl (E), Ethyl (K), Ethyl (N-term), Ethyl (Protein N-term), Ethyl+Deamidated (N), Ethyl+Deamidated (Q), ethylamino (S), ethylamino (T), Ethylphosphate (K), Ethylphosphate (N-term), Ethylphosphate (S), Ethylphosphate (T), Ethylphosphate (Y), ethylsulfonylethyl (C), ethylsulfonylethyl (H), ethylsulfonylethyl (K), Ethynyl (C), ExacTagAmine (K), ExacTagThiol (C), FAD (C), FAD (H), FAD (Y), Farnesyl (C), Fluorescein (C), Fluorescein-tyramine (Y), Fluoro (A), Fluoro (F), Fluoro (W), Fluoro (Y), FMN (S), FMN (T), FMNC (C), FMNH (C), FMNH (H), FNEM (C), Formyl (K), Formyl (N-term), Formyl (Protein N-term), Formyl (S), Formyl (T), Formylasparagine (H), FormylMet (Protein N-term), FP-Biotin (K), FP-Biotin (S), FP-Biotin (T), FP-Biotin (Y), FTC (C), FTC (K), FTC (P), FTC (R), FTC (S), Furan (Y), G-H1 (R), Galactosyl (K), Galactosyl (N-term), GEE (Q), GeranylGeranyl (C), GG (C), GG (K), GG (Protein N-term), GG (S), GG (T), GGQ (K), GIST-Quat (K), GIST-Quat (N-term), GIST-Quat:2H(3) (K), GIST-Quat:2H(3) (N-term), GIST-Quat:2H(6) (K), GIST-Quat:2H(6) (N-term), GIST-Quat:2H(9) (K), GIST-Quat:2H(9) (N-term), Gln->Ala (Q), Gln->Arg (Q), Gln->Asn (Q), Gln->Asp (Q), Gln->Cys (Q), Gln->Glu (Q), Gln->Gly (Q), Gln->His (Q), Gln->Lys (Q), Gln->Met (Q), Gln->Phe (Q), Gln->Pro (Q), Gln->pyro-Glu (N-term Q), Gln->Ser (Q), Gln->Thr (Q), Gln->Trp (Q), Gln->Tyr (Q), Gln->Val (Q), Gln->Xle (Q), Glu (E), Glu (Protein C-term), Glu+O(2) (H), Glu->Ala (E), Glu->Arg (E), Glu->Asn (E), Glu->Asp (E), Glu->Cys (E), Glu->Gln (E), Glu->Gly (E), Glu->His (E), Glu->Lys (E), Glu->Met (E), Glu->Phe (E), Glu->Pro (E), Glu->pyro-Glu (N-term E), Glu->pyro-Glu+Methyl (N-term E), Glu->pyro-Glu+Methyl:2H(2)13C(1) (N-term E), Glu->Ser (E), Glu->Thr (E), Glu->Trp (E), Glu->Tyr (E), Glu->Val (E), Glu->Xle (E), glucosone (R), Glucosylgalactosyl (K), Glucuronyl (Protein N-term), Glucuronyl (S), Glucuronyl (T), GluGlu (E), GluGlu (Protein C-term), GluGluGlu (E), GluGluGlu (Protein C-term), GluGluGluGlu (E), GluGluGluGlu (Protein C-term), Gluratylation (K), Glutathione (C), Gly (K), Gly (S), Gly (T), Gly+O(2) (H), Gly->Ala (G), Gly->Arg (G), Gly->Asn (G), Gly->Asp (G), Gly->Cys (G), Gly->Gln (G), Gly->Glu (G), Gly->His (G), Gly->Lys (G), Gly->Met (G), Gly->Phe (G), Gly->Pro (G), Gly->Ser (G), Gly->Thr (G), Gly->Trp (G), Gly->Tyr (G), Gly->Val (G), Gly->Xle (G), Gly-loss+Amide (C-term G), Glycerophospho (S), Glyceroyl (K), Glyceroyl (Protein N-term), GlycerylPE (E), glycidamide (K), glycidamide (N-term), Glycosyl (P), glyoxalAGE (R), Glyoxylyl (K), GNLLFLACYCIGG (K), GPIanchor (Protein C-term), Guanidinyl (K), Guanidinyl (N-term), Haloxon (C), Haloxon (H), Haloxon (K), Haloxon (S), Haloxon (T), Haloxon (Y), HCysteinyl (C), HCysThiolactone (K), Heme (C), Heme (H), Hep (K), Hep (N), Hep (Q), Hep (R), Hep (S), Hep (T), Hex (C), Hex (K), Hex (N), Hex (N-term), Hex (R), Hex (S), Hex (T), Hex (W), Hex (Y), Hex(1)HexA(1) (S), Hex(1)HexA(1) (T), Hex(1)HexA(1)HexNAc(1) (S), Hex(1)HexA(1)HexNAc(1) (T), Hex(1)HexA(1)HexNAc(2) (S), Hex(1)HexA(1)HexNAc(2) (T), Hex(1)HexNAc(1) (N), Hex(1)HexNAc(1) (S), Hex(1)HexNAc(1) (T), Hex(1)HexNAc(1)dHex(1) (N), Hex(1)HexNAc(1)dHex(1) (S), Hex(1)HexNAc(1)dHex(1) (T), Hex(1)HexNAc(1)dHex(1)Me(1) (S), Hex(1)HexNAc(1)dHex(1)Me(1) (T), Hex(1)HexNAc(1)dHex(1)Me(2) (S), Hex(1)HexNAc(1)dHex(1)Me(2) (T), Hex(1)HexNAc(1)Kdn(1)Sulf(1) (S), Hex(1)HexNAc(1)Kdn(1)Sulf(1) (T), Hex(1)HexNAc(1)NeuAc(1) (N), Hex(1)HexNAc(1)NeuAc(1) (S), Hex(1)HexNAc(1)NeuAc(1) (T), Hex(1)HexNAc(1)NeuAc(1)Ac(1) (S), Hex(1)HexNAc(1)NeuAc(1)Ac(1) (T), Hex(1)HexNAc(1)NeuAc(1)NeuGc(1) (S), Hex(1)HexNAc(1)NeuAc(1)NeuGc(1) (T), Hex(1)HexNAc(1)NeuAc(1)Sulf(1) (S), Hex(1)HexNAc(1)NeuAc(1)Sulf(1) (T), Hex(1)HexNAc(1)NeuAc(2) (N), Hex(1)HexNAc(1)NeuAc(2) (S), Hex(1)HexNAc(1)NeuAc(2) (T), Hex(1)HexNAc(1)NeuAc(2)Ac(1) (S), Hex(1)HexNAc(1)NeuAc(2)Ac(1) (T), Hex(1)HexNAc(1)NeuAc(2)Ac(2) (S), Hex(1)HexNAc(1)NeuAc(2)Ac(2) (T), Hex(1)HexNAc(1)NeuAc(3) (S), Hex(1)HexNAc(1)NeuAc(3) (T), Hex(1)HexNAc(1)NeuGc(1) (S), Hex(1)HexNAc(1)NeuGc(1) (T), Hex(1)HexNAc(1)NeuGc(2) (S), Hex(1)HexNAc(1)NeuGc(2) (T), Hex(1)HexNAc(1)NeuGc(3) (S), Hex(1)HexNAc(1)NeuGc(3) (T), Hex(1)HexNAc(1)NeuGc(4) (S), Hex(1)HexNAc(1)NeuGc(4) (T), Hex(1)HexNAc(1)NeuGc(5) (S), Hex(1)HexNAc(1)NeuGc(5) (T), Hex(1)HexNAc(1)Phos(1) (S), Hex(1)HexNAc(1)Phos(1) (T), Hex(1)HexNAc(1)Sulf(1) (S), Hex(1)HexNAc(1)Sulf(1) (T), Hex(1)HexNAc(2) (N), Hex(1)HexNAc(2) (S), Hex(1)HexNAc(2) (T), Hex(1)HexNAc(2)dHex(1) (N), Hex(1)HexNAc(2)dHex(1) (S), Hex(1)HexNAc(2)dHex(1) (T), Hex(1)HexNAc(2)dHex(1)Pent(1) (N), Hex(1)HexNAc(2)dHex(2) (N), Hex(1)HexNAc(2)dHex(2) (S), Hex(1)HexNAc(2)dHex(2) (T), Hex(1)HexNAc(2)dHex(2)Sulf(1) (S), Hex(1)HexNAc(2)dHex(2)Sulf(1) (T), Hex(1)HexNAc(2)NeuAc(1) (S), Hex(1)HexNAc(2)NeuAc(1) (T), Hex(1)HexNAc(2)NeuAc(1)Sulf(1) (S), Hex(1)HexNAc(2)NeuAc(1)Sulf(1) (T), Hex(1)HexNAc(2)NeuAc(2) (S), Hex(1)HexNAc(2)NeuAc(2) (T), Hex(1)HexNAc(2)NeuAc(2)Sulf(1) (S), Hex(1)HexNAc(2)NeuAc(2)Sulf(1) (T), Hex(1)HexNAc(2)NeuGc(1) (S), Hex(1)HexNAc(2)NeuGc(1) (T), Hex(1)HexNAc(2)Pent(1) (N), Hex(1)HexNAc(2)Sulf(1) (S), Hex(1)HexNAc(2)Sulf(1) (T), Hex(1)HexNAc(3) (S), Hex(1)HexNAc(3) (T), Hex(1)HexNAc(3)NeuAc(1) (S), Hex(1)HexNAc(3)NeuAc(1) (T), Hex(1)HexNAc(3)NeuAc(2) (S), Hex(1)HexNAc(3)NeuAc(2) (T), Hex(1)HexNAc(3)NeuGc(1) (S), Hex(1)HexNAc(3)NeuGc(1) (T), Hex(1)HexNAc(3)Sulf(1) (S), Hex(1)HexNAc(3)Sulf(1) (T), Hex(1)HexNAc(4)dHex(1)Sulf(1) (S), Hex(1)HexNAc(4)dHex(1)Sulf(1) (T), Hex(1)NeuAc(1) (S), Hex(1)NeuAc(1) (T), Hex(1)NeuAc(1)Pent(1) (S), Hex(1)NeuAc(1)Pent(1) (T), Hex(1)NeuGc(1) (S), Hex(1)NeuGc(1) (T), Hex(1)Pent(1) (S), Hex(1)Pent(1) (T), Hex(1)Pent(2) (S), Hex(1)Pent(2) (T), Hex(1)Pent(2)Me(1) (S), Hex(1)Pent(2)Me(1) (T), Hex(1)Pent(3) (S), Hex(1)Pent(3) (T), Hex(1)Pent(3)Me(1) (S), Hex(1)Pent(3)Me(1) (T), Hex(10)HexNAc(1) (N), Hex(10)Phos(3) (S), Hex(10)Phos(3) (T), Hex(2) (K), Hex(2) (R), Hex(2) (S), Hex(2) (T), Hex(2)HexA(1)HexNAc(1)Sulf(1) (S), Hex(2)HexA(1)HexNAc(1)Sulf(1) (T), Hex(2)HexA(1)NeuAc(1)Pent(1)Sulf(1) (S), Hex(2)HexA(1)NeuAc(1)Pent(1)Sulf(1) (T), Hex(2)HexA(1)Pent(1)Sulf(1) (S), Hex(2)HexA(1)Pent(1)Sulf(1) (T), Hex(2)HexNAc(1) (N), Hex(2)HexNAc(1) (S), Hex(2)HexNAc(1) (T), Hex(2)HexNAc(1)Me(1) (S), Hex(2)HexNAc(1)Me(1) (T), Hex(2)HexNAc(1)NeuGc(1) (S), Hex(2)HexNAc(1)NeuGc(1) (T), Hex(2)HexNAc(1)NeuGc(2) (S), Hex(2)HexNAc(1)NeuGc(2) (T), Hex(2)HexNAc(1)NeuGc(3) (S), Hex(2)HexNAc(1)NeuGc(3) (T), Hex(2)HexNAc(1)NeuGc(4) (S), Hex(2)HexNAc(1)NeuGc(4) (T), Hex(2)HexNAc(1)Pent(1)HexA(1) (S), Hex(2)HexNAc(1)Pent(1)HexA(1) (T), Hex(2)HexNAc(1)Sulf(1) (S), Hex(2)HexNAc(1)Sulf(1) (T), Hex(2)HexNAc(2) (N), Hex(2)HexNAc(2) (S), Hex(2)HexNAc(2) (T), Hex(2)HexNAc(2)dHex(1) (N), Hex(2)HexNAc(2)dHex(1) (S), Hex(2)HexNAc(2)dHex(1) (T), Hex(2)HexNAc(2)NeuAc(1) (N), Hex(2)HexNAc(2)NeuAc(1) (S), Hex(2)HexNAc(2)NeuAc(1) (T), Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (S), Hex(2)HexNAc(2)NeuAc(1)Sulf(1) (T), Hex(2)HexNAc(2)NeuAc(2) (S), Hex(2)HexNAc(2)NeuAc(2) (T), Hex(2)HexNAc(2)NeuAc(2)Sulf(1) (S), Hex(2)HexNAc(2)NeuAc(2)Sulf(1) (T), Hex(2)HexNAc(2)NeuGc(1) (S), Hex(2)HexNAc(2)NeuGc(1) (T), Hex(2)HexNAc(2)Pent(1) (N), Hex(2)HexNAc(2)Sulf(1) (S), Hex(2)HexNAc(2)Sulf(1) (T), Hex(2)HexNAc(3) (N), Hex(2)HexNAc(3) (S), Hex(2)HexNAc(3) (T), Hex(2)HexNAc(3)NeuAc(1)NeuGc(1) (S), Hex(2)HexNAc(3)NeuAc(1)NeuGc(1) (T), Hex(2)HexNAc(3)NeuAc(1)Sulf(1) (S), Hex(2)HexNAc(3)NeuAc(1)Sulf(1) (T), Hex(2)HexNAc(3)NeuAc(2) (S), Hex(2)HexNAc(3)NeuAc(2) (T), Hex(2)HexNAc(3)NeuAc(3) (S), Hex(2)HexNAc(3)NeuAc(3) (T), Hex(2)HexNAc(3)NeuGc(1) (S), Hex(2)HexNAc(3)NeuGc(1) (T), Hex(2)HexNAc(3)NeuGc(2) (S), Hex(2)HexNAc(3)NeuGc(2) (T), Hex(2)HexNAc(3)NeuGc(3) (S), Hex(2)HexNAc(3)NeuGc(3) (T), Hex(2)HexNAc(3)Sulf(1) (S), Hex(2)HexNAc(3)Sulf(1) (T), Hex(2)HexNAc(4) (N), Hex(2)HexNAc(4) (S), Hex(2)HexNAc(4) (T), Hex(2)HexNAc(4)NeuAc(1) (S), Hex(2)HexNAc(4)NeuAc(1) (T), Hex(2)HexNAc(5) (S), Hex(2)HexNAc(5) (T), Hex(2)NeuAc(1) (S), Hex(2)NeuAc(1) (T), Hex(2)Pent(2) (S), Hex(2)Pent(2) (T), Hex(2)Pent(2)Me(1) (S), Hex(2)Pent(2)Me(1) (T), Hex(2)Sulf(1) (S), Hex(2)Sulf(1) (T), Hex(3) (N), Hex(3) (S), Hex(3) (T), Hex(3)HexNAc(1) (N), Hex(3)HexNAc(1) (S), Hex(3)HexNAc(1) (T), Hex(3)HexNAc(1)HexA(1) (S), Hex(3)HexNAc(1)HexA(1) (T), Hex(3)HexNAc(1)Me(1) (S), Hex(3)HexNAc(1)Me(1) (T), Hex(3)HexNAc(1)Pent(1) (N), Hex(3)HexNAc(2) (N), Hex(3)HexNAc(2) (S), Hex(3)HexNAc(2) (T), Hex(3)HexNAc(2)NeuAc(1) (N), Hex(3)HexNAc(2)NeuAc(2) (S), Hex(3)HexNAc(2)NeuAc(2) (T), Hex(3)HexNAc(2)Pent(1) (N), Hex(3)HexNAc(2)Phos(1) (N), Hex(3)HexNAc(3) (N), Hex(3)HexNAc(3) (S), Hex(3)HexNAc(3) (T), Hex(3)HexNAc(3)NeuAc(1) (S), Hex(3)HexNAc(3)NeuAc(1) (T), Hex(3)HexNAc(3)NeuAc(1)Sulf(1) (S), Hex(3)HexNAc(3)NeuAc(1)Sulf(1) (T), Hex(3)HexNAc(3)NeuAc(2) (S), Hex(3)HexNAc(3)NeuAc(2) (T), Hex(3)HexNAc(3)NeuAc(2)Sulf(1) (S), Hex(3)HexNAc(3)NeuAc(2)Sulf(1) (T), Hex(3)HexNAc(3)NeuAc(3) (S), Hex(3)HexNAc(3)NeuAc(3) (T), Hex(3)HexNAc(3)NeuGc(1) (S), Hex(3)HexNAc(3)NeuGc(1) (T), Hex(3)HexNAc(3)NeuGc(1)Sulf(1) (S), Hex(3)HexNAc(3)NeuGc(1)Sulf(1) (T), Hex(3)HexNAc(3)Pent(1) (N), Hex(3)HexNAc(3)Sulf(1) (N), Hex(3)HexNAc(3)Sulf(1) (S), Hex(3)HexNAc(3)Sulf(1) (T), Hex(3)HexNAc(4) (N), Hex(3)HexNAc(4) (S), Hex(3)HexNAc(4) (T), Hex(3)HexNAc(4)NeuAc(1) (N), Hex(3)HexNAc(4)NeuAc(2) (N), Hex(3)HexNAc(4)Pent(1) (N), Hex(3)HexNAc(4)Sulf(1) (N), Hex(3)HexNAc(5) (N), Hex(3)HexNAc(5) (S), Hex(3)HexNAc(5) (T), Hex(3)HexNAc(5)NeuAc(1) (N), Hex(3)HexNAc(5)Sulf(1) (N), Hex(3)HexNAc(6) (N), Hex(3)HexNAc(6) (S), Hex(3)HexNAc(6) (T), Hex(3)HexNAc(6)NeuAc(1) (N), Hex(3)HexNAc(6)Sulf(1) (N), Hex(3)HexNAc(6)Sulf(2) (N), Hex(3)HexNAc(7) (N), Hex(3)HexNAc(7)Sulf(1) (N), Hex(4) (S), Hex(4) (T), Hex(4)HexA(1) (S), Hex(4)HexA(1) (T), Hex(4)HexA(1)HexNAc(1) (S), Hex(4)HexA(1)HexNAc(1) (T), Hex(4)HexNAc(1) (N), Hex(4)HexNAc(1) (S), Hex(4)HexNAc(1) (T), Hex(4)HexNAc(2) (N), Hex(4)HexNAc(2)NeuAc(1) (N), Hex(4)HexNAc(2)NeuAc(1) (S), Hex(4)HexNAc(2)NeuAc(1) (T), Hex(4)HexNAc(2)Pent(1) (N), Hex(4)HexNAc(3) (N), Hex(4)HexNAc(3) (S), Hex(4)HexNAc(3) (T), Hex(4)HexNAc(3)NeuAc(1) (N), Hex(4)HexNAc(3)NeuAc(1) (S), Hex(4)HexNAc(3)NeuAc(1) (T), Hex(4)HexNAc(3)NeuAc(2) (N), Hex(4)HexNAc(3)NeuGc(1) (N), Hex(4)HexNAc(3)Pent(1) (N), Hex(4)HexNAc(4) (N), Hex(4)HexNAc(4) (S), Hex(4)HexNAc(4) (T), Hex(4)HexNAc(4)Me(2)Pent(1) (N), Hex(4)HexNAc(4)NeuAc(1) (N), Hex(4)HexNAc(4)NeuAc(1) (S), Hex(4)HexNAc(4)NeuAc(1) (T), Hex(4)HexNAc(4)NeuAc(1)Sulf(2) (S), Hex(4)HexNAc(4)NeuAc(1)Sulf(2) (T), Hex(4)HexNAc(4)NeuAc(1)Sulf(3) (S), Hex(4)HexNAc(4)NeuAc(1)Sulf(3) (T), Hex(4)HexNAc(4)NeuGc(1) (N), Hex(4)HexNAc(4)NeuGc(1) (S), Hex(4)HexNAc(4)NeuGc(1) (T), Hex(4)HexNAc(4)NeuGc(1)Sulf(2) (S), Hex(4)HexNAc(4)NeuGc(1)Sulf(2) (T), Hex(4)HexNAc(4)Pent(1) (N), Hex(4)HexNAc(4)Sulf(1) (N), Hex(4)HexNAc(4)Sulf(2) (S), Hex(4)HexNAc(4)Sulf(2) (T), Hex(4)HexNAc(5) (N), Hex(4)HexNAc(5)NeuAc(1) (N), Hex(4)HexNAc(5)Sulf(1) (N), Hex(4)HexNAc(6) (N), Hex(4)Phos(1) (S), Hex(4)Phos(1) (T), Hex(5) (S), Hex(5) (T), Hex(5)HexA(1) (S), Hex(5)HexA(1) (T), Hex(5)HexNAc(1) (N), Hex(5)HexNAc(1) (S), Hex(5)HexNAc(1) (T), Hex(5)HexNAc(2) (N), Hex(5)HexNAc(2)Phos(1) (N), Hex(5)HexNAc(3) (N), Hex(5)HexNAc(3)Pent(1) (N), Hex(5)HexNAc(4) (N), Hex(5)HexNAc(4) (S), Hex(5)HexNAc(4) (T), Hex(5)HexNAc(4)Me(2)Pent(1) (N), Hex(5)HexNAc(4)NeuAc(1) (N), Hex(5)HexNAc(4)NeuAc(1)Ac(1) (N), Hex(5)HexNAc(4)NeuAc(1)Ac(2) (N), Hex(5)HexNAc(4)NeuAc(1)Sulf(1) (N), Hex(5)HexNAc(4)NeuAc(2) (N), Hex(5)HexNAc(4)NeuGc(1) (N), Hex(5)HexNAc(4)Sulf(1) (N), Hex(5)HexNAc(5) (N), Hex(5)HexNAc(5) (S), Hex(5)HexNAc(5) (T), Hex(5)Phos(1) (S), Hex(5)Phos(1) (T), Hex(5)Phos(3) (S), Hex(5)Phos(3) (T), Hex(6)HexNAc(1) (N), Hex(6)HexNAc(2) (N), Hex(6)HexNAc(2)Phos(1) (N), Hex(6)HexNAc(3) (N), Hex(6)HexNAc(3)Phos(1) (N), Hex(6)HexNAc(4) (N), Hex(6)HexNAc(4) (S), Hex(6)HexNAc(4) (T), Hex(6)HexNAc(4)Me(3) (N), Hex(6)HexNAc(4)Me(3)Pent(1) (N), Hex(6)HexNAc(5) (N), Hex(6)HexNAc(5)NeuAc(3) (N), Hex(6)Phos(1) (S), Hex(6)Phos(1) (T), Hex(6)Phos(3) (S), Hex(6)Phos(3) (T), Hex(7)HexNAc(1) (N), Hex(7)HexNAc(2) (N), Hex(7)HexNAc(2)Phos(1) (N), Hex(7)HexNAc(2)Phos(2) (N), Hex(7)HexNAc(3) (N), Hex(7)HexNAc(3)Phos(1) (N), Hex(7)HexNAc(4) (N), Hex(7)HexNAc(6) (N), Hex(7)HexNAc(6) (S), Hex(7)HexNAc(6) (T), Hex(7)Phos(3) (S), Hex(7)Phos(3) (T), Hex(8)HexNAc(1) (N), Hex(8)HexNAc(2) (N), Hex(8)Phos(3) (S), Hex(8)Phos(3) (T), Hex(9) (N), Hex(9)HexNAc(1) (N), Hex(9)HexNAc(2) (N), Hex(9)Phos(3) (S), Hex(9)Phos(3) (T), HexA(2)HexNAc(3) (S), HexA(2)HexNAc(3) (T), Hexanoyl (K), HexN (K), HexN (N), HexN (S), HexN (T), HexN (W), HexNAc (C), HexNAc (N), HexNAc (S), HexNAc (T), HexNAc(1)dHex(1) (N), HexNAc(1)dHex(1) (S), HexNAc(1)dHex(1) (T), HexNAc(1)dHex(2) (N), HexNAc(1)Kdn(2) (S), HexNAc(1)Kdn(2) (T), HexNAc(1)NeuAc(1) (S), HexNAc(1)NeuAc(1) (T), HexNAc(1)NeuGc(1) (S), HexNAc(1)NeuGc(1) (T), HexNAc(1)NeuGc(2) (S), HexNAc(1)NeuGc(2) (T), HexNAc(2) (N), HexNAc(2) (S), HexNAc(2) (T), HexNAc(2)dHex(1) (N), HexNAc(2)dHex(2) (N), HexNAc(2)NeuAc(1) (S), HexNAc(2)NeuAc(1) (T), HexNAc(2)NeuAc(1)Sulf(1) (S), HexNAc(2)NeuAc(1)Sulf(1) (T), HexNAc(2)NeuGc(1) (S), HexNAc(2)NeuGc(1) (T), HexNAc(2)Sulf(1) (S), HexNAc(2)Sulf(1) (T), HexNAc(3) (S), HexNAc(3) (T), HexNAc(3)Sulf(1) (S), HexNAc(3)Sulf(1) (T), HexNAc(4) (S), HexNAc(4) (T), HexNAc(5) (S), HexNAc(5) (T), His+O(2) (H), His->Ala (H), His->Arg (H), His->Asn (H), His->Asp (H), His->Cys (H), His->Gln (H), His->Glu (H), His->Gly (H), His->Lys (H), His->Met (H), His->Phe (H), His->Pro (H), His->Ser (H), His->Thr (H), His->Trp (H), His->Tyr (H), His->Val (H), His->Xle (H), HMVK (C), HN2_mustard (C), HN2_mustard (H), HN2_mustard (K), HN3_mustard (C), HN3_mustard (H), HN3_mustard (K), HNE (A), HNE (C), HNE (H), HNE (K), HNE (L), HNE (R), HNE+Delta:H(2) (C), HNE+Delta:H(2) (H), HNE+Delta:H(2) (K), HNE-BAHAH (C), HNE-BAHAH (H), HNE-BAHAH (K), HNE-Delta:H(2)O (C), HNE-Delta:H(2)O (H), HNE-Delta:H(2)O (K), Homocysteic_acid (M), HPG (R), Hydroxamic_acid (D), Hydroxamic_acid (E), Hydroxycinnamyl (C), Hydroxyfarnesyl (C), Hydroxyheme (E), hydroxyisobutyryl (K), Hydroxymethyl (N), HydroxymethylOP (K), Hydroxytrimethyl (K), Hypusine (K), IASD (C), IBTP (C), ICAT-C (C), ICAT-C:13C(9) (C), ICAT-D (C), ICAT-D:2H(8) (C), ICAT-G (C), ICAT-G:2H(8) (C), ICAT-H (C), ICAT-H:13C(6) (C), ICDID (C), ICDID:2H(6) (C), ICPL (K), ICPL (N-term), ICPL (Protein N-term), ICPL:13C(6) (K), ICPL:13C(6) (N-term), ICPL:13C(6) (Protein N-term), ICPL:13C(6)2H(4) (K), ICPL:13C(6)2H(4) (N-term), ICPL:13C(6)2H(4) (Protein N-term), ICPL:2H(4) (K), ICPL:2H(4) (N-term), ICPL:2H(4) (Protein N-term), IDEnT (C), IED-Biotin (C), IGBP (C), IGBP:13C(2) (C), IMEHex(2)NeuAc(1) (K), IMID (K), IMID:2H(4) (K), Iminobiotin (K), Iminobiotin (N-term), Iodo (H), Iodo (Y), Iodoacetanilide (C), Iodoacetanilide (K), Iodoacetanilide (N-term), Iodoacetanilide:13C(6) (C), Iodoacetanilide:13C(6) (K), Iodoacetanilide:13C(6) (N-term), iodoTMT (C), iodoTMT (D), iodoTMT (E), iodoTMT (H), iodoTMT (K), iodoTMT6plex (C), iodoTMT6plex (D), iodoTMT6plex (E), iodoTMT6plex (H), iodoTMT6plex (K), IodoU-AMP (F), IodoU-AMP (W), IodoU-AMP (Y), ISD_z+2_ion (N-term), Isopropylphospho (S), Isopropylphospho (T), Isopropylphospho (Y), Isovaleryl (K), iST-NHS specific cysteine modification (C), Itaconatyl (C), Itaconyl (K), iTRAQ4plex (C), iTRAQ4plex (H), iTRAQ4plex (K), iTRAQ4plex (N-term), iTRAQ4plex (Protein N-term), iTRAQ4plex (S), iTRAQ4plex (T), iTRAQ4plex (Y), iTRAQ4plex114 (C), iTRAQ4plex114 (K), iTRAQ4plex114 (N-term), iTRAQ4plex114 (Y), iTRAQ4plex115 (C), iTRAQ4plex115 (K), iTRAQ4plex115 (N-term), iTRAQ4plex115 (Y), iTRAQ8plex (C), iTRAQ8plex (H), iTRAQ8plex (K), iTRAQ8plex (N-term), iTRAQ8plex (Protein N-term), iTRAQ8plex (S), iTRAQ8plex (T), iTRAQ8plex (Y), iTRAQ8plex:13C(6)15N(2) (C), iTRAQ8plex:13C(6)15N(2) (K), iTRAQ8plex:13C(6)15N(2) (N-term), iTRAQ8plex:13C(6)15N(2) (Y), L-Gln (D), L-Gln (E), Label:13C(1)2H(3) (M), Label:13C(1)2H(3)+Oxidation (M), Label:13C(2)15N(1) (G), Label:13C(2)15N(2) (K), Label:13C(3) (A), Label:13C(3)15N(1) (A), Label:13C(3)15N(1) (S), Label:13C(4) (M), Label:13C(4)+Oxidation (M), Label:13C(4)15N(1) (D), Label:13C(4)15N(2)+GG (K), Label:13C(5) (P), Label:13C(5)15N(1) (E), Label:13C(5)15N(1) (M), Label:13C(5)15N(1) (P), Label:13C(5)15N(1) (V), Label:13C(6) (I), Label:13C(6) (K), Label:13C(6) (L), Label:13C(6) (R), Label:13C(6)+Acetyl (K), Label:13C(6)+Dimethyl (K), Label:13C(6)+GG (K), Label:13C(6)15N(1) (I), Label:13C(6)15N(1) (L), Label:13C(6)15N(2) (K), Label:13C(6)15N(2)+Acetyl (K), Label:13C(6)15N(2)+Dimethyl (K), Label:13C(6)15N(2)+GG (K), Label:13C(6)15N(2)+TMT6plex (K), Label:13C(6)15N(2)+TMTpro (K), Label:13C(6)15N(4) (R), Label:13C(6)15N(4)+Dimethyl (R), Label:13C(6)15N(4)+Dimethyl:2H(6)13C(2) (R), Label:13C(6)15N(4)+Methyl (R), Label:13C(6)15N(4)+Methyl:2H(3)13C(1) (R), Label:13C(9) (F), Label:13C(9) (Y), Label:13C(9)+Phospho (Y), Label:13C(9)15N(1) (F), Label:15N(1) (A), Label:15N(1) (C), Label:15N(1) (D), Label:15N(1) (E), Label:15N(1) (F), Label:15N(1) (G), Label:15N(1) (I), Label:15N(1) (L), Label:15N(1) (M), Label:15N(1) (P), Label:15N(1) (S), Label:15N(1) (T), Label:15N(1) (V), Label:15N(1) (Y), Label:15N(2) (K), Label:15N(2) (N), Label:15N(2) (Q), Label:15N(2) (W), Label:15N(2)2H(9) (K), Label:15N(3) (H), Label:15N(4) (R), Label:18O(1) (C-term), Label:18O(1) (S), Label:18O(1) (T), Label:18O(1) (Y), Label:18O(2) (C-term), Label:2H(10) (L), Label:2H(3) (L), Label:2H(3) (M), Label:2H(3)+Oxidation (M), Label:2H(4) (A), Label:2H(4) (F), Label:2H(4) (K), Label:2H(4) (U), Label:2H(4) (Y), Label:2H(4)+Acetyl (K), Label:2H(4)+GG (K), Label:2H(4)13C(1) (R), Label:2H(6)15N(1) (P), Label:2H(7)15N(4) (R), Label:2H(9)13C(6)15N(2) (K), Lactylation (K), lapachenole (C), Leu->MetOx (L), LG-anhydrolactam (K), LG-anhydrolactam (N-term), LG-anhyropyrrole (K), LG-anhyropyrrole (N-term), LG-Hlactam-K (K), LG-Hlactam-K (Protein N-term), LG-Hlactam-R (R), LG-lactam-K (K), LG-lactam-K (Protein N-term), LG-lactam-R (R), LG-pyrrole (C), LG-pyrrole (K), LG-pyrrole (N-term), Lipoyl (K), LRGG (K), LRGG+dimethyl (K), LRGG+methyl (K), LTX+Lophotoxin (Y), Lys (N-term), Lys+O(2) (H), Lys->Ala (K), Lys->Allysine (K), Lys->AminoadipicAcid (K), Lys->Arg (K), Lys->Asn (K), Lys->Asp (K), Lys->CamCys (K), Lys->Cys (K), Lys->Gln (K), Lys->Glu (K), Lys->Gly (K), Lys->His (K), Lys->Met (K), Lys->MetOx (K), Lys->Phe (K), Lys->Pro (K), Lys->Ser (K), Lys->Thr (K), Lys->Trp (K), Lys->Tyr (K), Lys->Val (K), Lys->Xle (K), Lys-loss (K), Lys-loss (Protein C-term K), Lysbiotinhydrazide (K), maleimide (C), maleimide (K), Maleimide-PEO2-Biotin (C), maleimide3 (C), maleimide3 (K), maleimide5 (C), maleimide5 (K), Malonyl (C), Malonyl (K), Malonyl (S), MBS+peptide (C), MDCC (C), MeMePhosphorothioate (S), Menadione (C), Menadione (K), Menadione-HQ (C), Menadione-HQ (K), MercaptoEthanol (S), MercaptoEthanol (T), MesitylOxide (H), MesitylOxide (K), MesitylOxide (Protein N-term), Met+O(2) (H), Met->Aha (M), Met->Ala (M), Met->Arg (M), Met->Asn (M), Met->Asp (M), Met->AspSA (M), Met->Cys (M), Met->Gln (M), Met->Glu (M), Met->Gly (M), Met->His (M), Met->Hpg (M), Met->Hse (C-term M), Met->Hsl (C-term M), Met->Lys (M), Met->Phe (M), Met->Pro (M), Met->Ser (M), Met->Thr (M), Met->Trp (M), Met->Tyr (M), Met->Val (M), Met->Xle (M), Met-loss (Protein N-term M), Met-loss+Acetyl (Protein N-term M), Methamidophos-O (C), Methamidophos-O (H), Methamidophos-O (K), Methamidophos-O (S), Methamidophos-O (T), Methamidophos-O (Y), Methamidophos-S (C), Methamidophos-S (H), Methamidophos-S (K), Methamidophos-S (S), Methamidophos-S (T), Methamidophos-S (Y), Methyl (C), Methyl (C-term), Methyl (D), Methyl (E), Methyl (H), Methyl (I), Methyl (K), Methyl (L), Methyl (N), Methyl (N-term), Methyl (Protein N-term), Methyl (Q), Methyl (R), Methyl (S), Methyl (T), Methyl+Acetyl:2H(3) (K), Methyl+Deamidated (N), Methyl+Deamidated (Q), Methyl-PEO12-Maleimide (C), Methyl:2H(2) (K), Methyl:2H(2) (N-term), Methyl:2H(2)13C (C), Methyl:2H(2)13C (C-term), Methyl:2H(2)13C (D), Methyl:2H(2)13C (E), Methyl:2H(2)13C (H), Methyl:2H(2)13C (I), Methyl:2H(2)13C (K), Methyl:2H(2)13C (L), Methyl:2H(2)13C (N), Methyl:2H(2)13C (N-term), Methyl:2H(2)13C (Protein N-term), Methyl:2H(2)13C (Q), Methyl:2H(2)13C (R), Methyl:2H(2)13C (S), Methyl:2H(2)13C (T), Methyl:2H(3) (D), Methyl:2H(3) (E), Methyl:2H(3) (K), Methyl:2H(3) (R), Methyl:2H(3) (X), Methyl:2H(3)+Acetyl:2H(3) (K), Methyl:2H(3)13C(1) (K), Methyl:2H(3)13C(1) (N-term), Methyl:2H(3)13C(1) (R), Methylamine (S), Methylamine (T), Methylmalonylation (S), methylol (K), methylol (W), methylol (Y), Methylphosphonate (S), Methylphosphonate (T), Methylphosphonate (Y), Methylpyrroline (K), methylsulfonylethyl (C), methylsulfonylethyl (H), methylsulfonylethyl (K), Methylthio (C), Methylthio (D), Methylthio (K), Methylthio (N), Methylthio (N-term), MG-H1 (R), Microcin (Protein C-term), MicrocinC7 (Protein C-term), MM-diphenylpentanone (C), Molybdopterin (C), MolybdopterinGD (C), MolybdopterinGD (D), MolybdopterinGD (U), MolybdopterinGD+Delta:S(-1)Se(1) (C), Mono_Ngamma-propargyl-L-Gln_desthiobiotin (C), monomethylphosphothione (C), monomethylphosphothione (H), monomethylphosphothione (K), monomethylphosphothione (S), monomethylphosphothione (T), monomethylphosphothione (Y), mTRAQ (H), mTRAQ (K), mTRAQ (N-term), mTRAQ (S), mTRAQ (T), mTRAQ (Y), mTRAQ:13C(3)15N(1) (H), mTRAQ:13C(3)15N(1) (K), mTRAQ:13C(3)15N(1) (N-term), mTRAQ:13C(3)15N(1) (S), mTRAQ:13C(3)15N(1) (T), mTRAQ:13C(3)15N(1) (Y), mTRAQ:13C(6)15N(2) (H), mTRAQ:13C(6)15N(2) (K), mTRAQ:13C(6)15N(2) (N-term), mTRAQ:13C(6)15N(2) (S), mTRAQ:13C(6)15N(2) (T), mTRAQ:13C(6)15N(2) (Y), MTSL (C), MurNAc (A), Myristoleyl (Protein N-term G), Myristoyl (C), Myristoyl (K), Myristoyl (N-term G), Myristoyl+Delta:H(-4) (Protein N-term G), N-dimethylphosphate (S), N6pAMP (S), N6pAMP (T), N6pAMP (Y), NA-LNO2 (C), NA-LNO2 (H), NA-OA-NO2 (C), NA-OA-NO2 (H), NBF (C), NBF (K), NBF (R), NBS (W), NBS:13C(6) (W), NDA (K), NDA (N-term), NEIAA (C), NEIAA (Y), NEIAA:2H(5) (C), NEIAA:2H(5) (Y), NEM:2H(5) (C), NEM:2H(5)+H2O (C), NEMsulfur (C), NEMsulfurWater (C), Nethylmaleimide (C), Nethylmaleimide+water (C), Nethylmaleimide+water (K), NeuAc (N), NeuAc (S), NeuAc (T), NeuGc (N), NeuGc (S), NeuGc (T), NHS-fluorescein (K), NHS-LC-Biotin (K), NHS-LC-Biotin (N-term), NIC (K), NIC (N-term), NIPCAM (C), Nitrene (Y), Nitro (F), Nitro (W), Nitro (Y), Nitrosyl (C), Nitrosyl (Y), Nmethylmaleimide (C), Nmethylmaleimide (K), Nmethylmaleimide+water (C), NO_SMX_SEMD (C), NO_SMX_SIMD (C), NP40 (N-term), NQIGG (K), NQTGG (K), O-Dimethylphosphate (S), O-Dimethylphosphate (T), O-Dimethylphosphate (Y), O-Et-N-diMePhospho (S), O-Isopropylmethylphosphonate (S), O-Isopropylmethylphosphonate (T), O-Isopropylmethylphosphonate (Y), O-Methylphosphate (S), O-Methylphosphate (T), O-Methylphosphate (Y), O-pinacolylmethylphosphonate (H), O-pinacolylmethylphosphonate (K), O-pinacolylmethylphosphonate (S), O-pinacolylmethylphosphonate (T), O-pinacolylmethylphosphonate (Y), Octanoyl (C), Octanoyl (S), Octanoyl (T), OxArgBiotin (R), OxArgBiotinRed (R), Oxidation (C), Oxidation (C-term G), Oxidation (D), Oxidation (E), Oxidation (F), Oxidation (H), Oxidation (I), Oxidation (K), Oxidation (L), Oxidation (M), Oxidation (N), Oxidation (P), Oxidation (Q), Oxidation (R), Oxidation (S), Oxidation (T), Oxidation (U), Oxidation (V), Oxidation (W), Oxidation (Y), Oxidation+NEM (C), OxLysBiotin (K), OxLysBiotinRed (K), OxProBiotin (P), OxProBiotinRed (P), Palmitoleyl (C), Palmitoleyl (S), Palmitoleyl (T), Palmitoyl (C), Palmitoyl (K), Palmitoyl (Protein N-term), Palmitoyl (S), Palmitoyl (T), PEITC (C), PEITC (K), PEITC (N-term), Pent(1)HexNAc(1) (S), Pent(1)HexNAc(1) (T), Pent(2) (S), Pent(2) (T), Pentanoyl (K), Pentose (S), Pentose (T), Pentylamine (Q), PEO-Iodoacetyl-LC-Biotin (C), PET (S), PET (T), Phe->Ala (F), Phe->Arg (F), Phe->Asn (F), Phe->Asp (F), Phe->CamCys (F), Phe->Cys (F), Phe->Gln (F), Phe->Glu (F), Phe->Gly (F), Phe->His (F), Phe->Lys (F), Phe->Met (F), Phe->Pro (F), Phe->Ser (F), Phe->Thr (F), Phe->Trp (F), Phe->Tyr (F), Phe->Val (F), Phe->Xle (F), phenyl-phosphate (K), phenyl-phosphate (S), phenyl-phosphate (T), phenyl-phosphate (Y), Phenylisocyanate (N-term), Phenylisocyanate:2H(5) (N-term), phenylsulfonylethyl (C), Phospho (C), Phospho (D), Phospho (E), Phospho (H), Phospho (K), Phospho (R), Phospho (S), Phospho (T), Phospho (Y), Phosphoadenosine (H), Phosphoadenosine (K), Phosphoadenosine (S), Phosphoadenosine (T), Phosphoadenosine (Y), PhosphoCytidine (S), PhosphoCytidine (T), PhosphoCytidine (Y), PhosphoDecoy (A), PhosphoDecoy (G), PhosphoDecoy (L), Phosphogluconoylation (K), Phosphogluconoylation (N-term), Phosphoguanosine (H), Phosphoguanosine (K), PhosphoHex (S), PhosphoHex (T), PhosphoHex(2) (N), PhosphoHex(2) (S), PhosphoHex(2) (T), PhosphoHexNAc (S), PhosphoHexNAc (T), Phosphopantetheine (S), Phosphopropargyl (S), Phosphopropargyl (T), Phosphopropargyl (Y), phosphoRibosyl (D), phosphoRibosyl (E), phosphoRibosyl (R), PhosphoribosyldephosphoCoA (S), PhosphoUridine (H), PhosphoUridine (Y), Phycocyanobilin (C), Phycoerythrobilin (C), Phytochromobilin (C), Piperidine (K), Piperidine (N-term), pRBS-ID_4-thiouridine (F), pRBS-ID_6-thioguanosine (W), Pro+O(2) (H), Pro->Ala (P), Pro->Arg (P), Pro->Asn (P), Pro->Asp (P), Pro->Cys (P), Pro->Gln (P), Pro->Glu (P), Pro->Gly (P), Pro->HAVA (P), Pro->His (P), Pro->Lys (P), Pro->Met (P), Pro->Phe (P), Pro->pyro-Glu (P), Pro->Pyrrolidinone (P), Pro->Pyrrolidone (P), Pro->Ser (P), Pro->Thr (P), Pro->Trp (P), Pro->Tyr (P), Pro->Val (P), Pro->Xle (P), probiotinhydrazide (P), Propargylamine (C-term), Propargylamine (D), Propargylamine (E), Propionamide (C), Propionamide (K), Propionamide (N-term), Propionamide:2H(3) (C), Propionyl (K), Propionyl (N-term), Propionyl (Protein N-term), Propionyl (S), Propionyl (T), Propionyl:13C(3) (K), Propionyl:13C(3) (N-term), Propiophenone (C), Propiophenone (H), Propiophenone (K), Propiophenone (R), Propiophenone (S), Propiophenone (T), Propiophenone (W), Propyl (C-term), Propyl (D), Propyl (E), Propyl (K), Propyl (N-term), Propyl (Protein C-term), Propyl:2H(6) (K), Propyl:2H(6) (N-term), PropylNAGthiazoline (C), PS_Hapten (C), PS_Hapten (H), PS_Hapten (K), pupylation (K), Puromycin (C-term), PyMIC (N-term), PyridoxalPhosphate (K), PyridoxalPhosphateH2 (K), Pyridylacetyl (K), Pyridylacetyl (N-term), Pyridylethyl (C), Pyro-carbamidomethyl (N-term C), Pyro-QQTGG (K), pyrophospho (S), pyrophospho (T), PyruvicAcidIminyl (K), PyruvicAcidIminyl (Protein N-term C), PyruvicAcidIminyl (Protein N-term V), Pyruvoyl (K), QAT (C), QAT:2H(3) (C), QEQTGG (K), QQQTGG (K), QQTGG (K), QTGG (K), Quinone (W), Quinone (Y), RBS-ID_Uridine (Y), Retinylidene (K), RNPXL (N-term K), RNPXL (N-term R), RNPXlink1 (C), s-GlcNAc (S), s-GlcNAc (T), Saligenin (H), Saligenin (K), Ser->Ala (S), Ser->Arg (S), Ser->Asn (S), Ser->Asp (S), Ser->Cys (S), Ser->Gln (S), Ser->Glu (S), Ser->Gly (S), Ser->His (S), Ser->LacticAcid (Protein N-term S), Ser->Lys (S), Ser->Met (S), Ser->Phe (S), Ser->Pro (S), Ser->Thr (S), Ser->Trp (S), Ser->Tyr (S), Ser->Val (S), Ser->Xle (S), Ser/Thr-KDO (S), Ser/Thr-KDO (T), serotonylation (Q), shTMT (K), shTMT (N-term), shTMT (Protein N-term), shTMTpro (K), shTMTpro (N-term), shTMTpro (Protein N-term), SMA (K), SMA (N-term), spermidine (Q), spermine (Q), SPITC (K), SPITC (N-term), SPITC:13C(6) (K), SPITC:13C(6) (N-term), Succinyl (K), Succinyl (N-term), Succinyl (Protein N-term), Succinyl:13C(4) (K), Succinyl:13C(4) (N-term), Succinyl:2H(4) (K), Succinyl:2H(4) (N-term), SulfanilicAcid (C-term), SulfanilicAcid (D), SulfanilicAcid (E), SulfanilicAcid:13C(6) (C-term), SulfanilicAcid:13C(6) (D), SulfanilicAcid:13C(6) (E), Sulfide (C), Sulfide (D), Sulfide (W), Sulfo (C), Sulfo (S), Sulfo (T), Sulfo (Y), sulfo+amino (Y), Sulfo-NHS-LC-LC-Biotin (K), Sulfo-NHS-LC-LC-Biotin (N-term), SulfoGMBS (C), SulfurDioxide (C), SUMO2135 (K), SUMO3549 (K), TAMRA-FP (S), TAMRA-FP (Y), Thiadiazole (C), Thiazolidine (C), Thiazolidine (F), Thiazolidine (H), Thiazolidine (K), Thiazolidine (Protein N-term), Thiazolidine (R), Thiazolidine (W), Thiazolidine (Y), thioacylPA (K), Thiophos-S-S-biotin (S), Thiophos-S-S-biotin (T), Thiophos-S-S-biotin (Y), Thiophospho (S), Thiophospho (T), Thiophospho (Y), Thr->Ala (T), Thr->Arg (T), Thr->Asn (T), Thr->Asp (T), Thr->Cys (T), Thr->Gln (T), Thr->Glu (T), Thr->Gly (T), Thr->His (T), Thr->Lys (T), Thr->Met (T), Thr->Phe (T), Thr->Pro (T), Thr->Ser (T), Thr->Trp (T), Thr->Tyr (T), Thr->Val (T), Thr->Xle (T), Thrbiotinhydrazide (T), Thyroxine (Y), Tiglyl (K), TMAB (K), TMAB (N-term), TMAB:2H(9) (K), TMAB:2H(9) (N-term), TMPP-Ac (K), TMPP-Ac (N-term), TMPP-Ac (Y), TMPP-Ac:13C(9) (K), TMPP-Ac:13C(9) (N-term), TMPP-Ac:13C(9) (Y), TMT (H), TMT (K), TMT (N-term), TMT (Protein N-term), TMT (S), TMT (T), TMT2plex (H), TMT2plex (K), TMT2plex (N-term), TMT2plex (Protein N-term), TMT2plex (S), TMT2plex (T), TMT6plex (H), TMT6plex (K), TMT6plex (N-term), TMT6plex (Protein N-term), TMT6plex (S), TMT6plex (T), TMTpro (H), TMTpro (K), TMTpro (N-term), TMTpro (Protein N-term), TMTpro (S), TMTpro (T), TMTpro_zero (H), TMTpro_zero (K), TMTpro_zero (N-term), TMTpro_zero (Protein N-term), TMTpro_zero (S), TMTpro_zero (T), TNBS (K), TNBS (N-term), trifluoro (L), Triiodo (Y), Triiodothyronine (Y), Trimethyl (K), Trimethyl (Protein N-term A), Trimethyl (R), Trimethyl:13C(3)2H(9) (K), Trimethyl:13C(3)2H(9) (R), Trimethyl:2H(9) (K), Trimethyl:2H(9) (R), Trioxidation (C), Trioxidation (F), Trioxidation (W), Trioxidation (Y), Tripalmitate (Protein N-term C), Tris (N), Triton (C-term), Triton (N-term), Trp->Ala (W), Trp->Arg (W), Trp->Asn (W), Trp->Asp (W), Trp->Cys (W), Trp->Gln (W), Trp->Glu (W), Trp->Gly (W), Trp->His (W), Trp->Hydroxykynurenin (W), Trp->Kynurenin (W), Trp->Lys (W), Trp->Met (W), Trp->Oxolactone (W), Trp->Phe (W), Trp->Pro (W), Trp->Ser (W), Trp->Thr (W), Trp->Tyr (W), Trp->Val (W), Trp->Xle (W), Tween20 (N-term), Tween80 (C-term), Tyr->Ala (Y), Tyr->Arg (Y), Tyr->Asn (Y), Tyr->Asp (Y), Tyr->Cys (Y), Tyr->Dha (Y), Tyr->Gln (Y), Tyr->Glu (Y), Tyr->Gly (Y), Tyr->His (Y), Tyr->Lys (Y), Tyr->Met (Y), Tyr->Phe (Y), Tyr->Pro (Y), Tyr->Ser (Y), Tyr->Thr (Y), Tyr->Trp (Y), Tyr->Val (Y), Tyr->Xle (Y), Ub-Br2 (C), Ub-fluorescein (C), Ub-VME (C), UgiJoullie (D), UgiJoullie (E), UgiJoullieProGly (D), UgiJoullieProGly (E), UgiJoullieProGlyProGly (D), UgiJoullieProGlyProGly (E), Unknown:162 (C-term), Unknown:162 (D), Unknown:162 (E), Unknown:162 (N-term), Unknown:177 (C-term), Unknown:177 (D), Unknown:177 (E), Unknown:177 (N-term), Unknown:210 (C-term), Unknown:210 (D), Unknown:210 (E), Unknown:210 (N-term), Unknown:216 (C-term), Unknown:216 (D), Unknown:216 (E), Unknown:216 (N-term), Unknown:234 (C-term), Unknown:234 (D), Unknown:234 (E), Unknown:234 (N-term), Unknown:248 (C-term), Unknown:248 (D), Unknown:248 (E), Unknown:248 (N-term), Unknown:250 (C-term), Unknown:250 (D), Unknown:250 (E), Unknown:250 (N-term), Unknown:302 (C-term), Unknown:302 (D), Unknown:302 (E), Unknown:302 (N-term), Unknown:306 (C-term), Unknown:306 (D), Unknown:306 (E), Unknown:306 (N-term), Unknown:420 (C-term), Unknown:420 (N-term), Val->Ala (V), Val->Arg (V), Val->Asn (V), Val->Asp (V), Val->Cys (V), Val->Gln (V), Val->Glu (V), Val->Gly (V), Val->His (V), Val->Lys (V), Val->Met (V), Val->Phe (V), Val->Pro (V), Val->Ser (V), Val->Thr (V), Val->Trp (V), Val->Tyr (V), Val->Xle (V), ValGly (K), VFQQQTGG (K), VIEVYQEQTGG (K), Withaferin (C), Xle->Ala (I), Xle->Ala (L), Xle->Arg (I), Xle->Arg (L), Xle->Asn (I), Xle->Asn (L), Xle->Asp (I), Xle->Asp (L), Xle->Cys (I), Xle->Cys (L), Xle->Gln (I), Xle->Gln (L), Xle->Glu (I), Xle->Glu (L), Xle->Gly (I), Xle->Gly (L), Xle->His (I), Xle->His (L), Xle->Lys (I), Xle->Lys (L), Xle->Met (I), Xle->Met (L), Xle->Phe (I), Xle->Phe (L), Xle->Pro (I), Xle->Pro (L), Xle->Ser (I), Xle->Ser (L), Xle->Thr (I), Xle->Thr (L), Xle->Trp (I), Xle->Trp (L), Xle->Tyr (I), Xle->Tyr (L), Xle->Val (I), Xle->Val (L), Xlink:B10621 (C), Xlink:BMOE (C), Xlink:BS2G[113] (K), Xlink:BS2G[113] (Protein N-term), Xlink:BS2G[114] (K), Xlink:BS2G[114] (Protein N-term), Xlink:BS2G[217] (K), Xlink:BS2G[217] (Protein N-term), Xlink:BS2G[96] (K), Xlink:BS2G[96] (Protein N-term), Xlink:BuUrBu[111] (K), Xlink:BuUrBu[111] (Protein N-term), Xlink:BuUrBu[111] (S), Xlink:BuUrBu[111] (T), Xlink:BuUrBu[111] (Y), Xlink:BuUrBu[196] (K), Xlink:BuUrBu[196] (Protein N-term), Xlink:BuUrBu[196] (S), Xlink:BuUrBu[196] (T), Xlink:BuUrBu[196] (Y), Xlink:BuUrBu[213] (K), Xlink:BuUrBu[213] (Protein N-term), Xlink:BuUrBu[213] (S), Xlink:BuUrBu[213] (T), Xlink:BuUrBu[213] (Y), Xlink:BuUrBu[214] (K), Xlink:BuUrBu[214] (Protein N-term), Xlink:BuUrBu[214] (S), Xlink:BuUrBu[214] (T), Xlink:BuUrBu[214] (Y), Xlink:BuUrBu[317] (K), Xlink:BuUrBu[317] (Protein N-term), Xlink:BuUrBu[317] (S), Xlink:BuUrBu[317] (T), Xlink:BuUrBu[317] (Y), Xlink:BuUrBu[85] (K), Xlink:BuUrBu[85] (Protein N-term), Xlink:BuUrBu[85] (S), Xlink:BuUrBu[85] (T), Xlink:BuUrBu[85] (Y), Xlink:DFDNB (K), Xlink:DFDNB (N), Xlink:DFDNB (Q), Xlink:DFDNB (R), Xlink:DMP[122] (K), Xlink:DMP[122] (Protein N-term), Xlink:DMP[139] (K), Xlink:DMP[139] (Protein N-term), Xlink:DMP[140] (K), Xlink:DMP[140] (Protein N-term), Xlink:DMP[154] (K), Xlink:DMP[154] (Protein N-term), Xlink:DSPP[210] (K), Xlink:DSPP[210] (Protein N-term), Xlink:DSPP[226] (K), Xlink:DSPP[226] (Protein N-term), Xlink:DSPP[228] (K), Xlink:DSPP[228] (Protein N-term), Xlink:DSPP[331] (K), Xlink:DSPP[331] (Protein N-term), Xlink:DSS[138] (K), Xlink:DSS[138] (Protein N-term), Xlink:DSS[155] (K), Xlink:DSS[155] (Protein N-term), Xlink:DSS[156] (K), Xlink:DSS[156] (Protein N-term), Xlink:DSS[259] (K), Xlink:DSS[259] (Protein N-term), Xlink:DSSO[104] (K), Xlink:DSSO[104] (Protein N-term), Xlink:DSSO[158] (K), Xlink:DSSO[158] (Protein N-term), Xlink:DSSO[175] (K), Xlink:DSSO[175] (Protein N-term), Xlink:DSSO[176] (K), Xlink:DSSO[176] (Protein N-term), Xlink:DSSO[279] (K), Xlink:DSSO[279] (Protein N-term), Xlink:DSSO[54] (K), Xlink:DSSO[54] (Protein N-term), Xlink:DSSO[86] (K), Xlink:DSSO[86] (Protein N-term), Xlink:DST[114] (K), Xlink:DST[114] (Protein N-term), Xlink:DST[132] (K), Xlink:DST[132] (Protein N-term), Xlink:DST[56] (K), Xlink:DST[56] (Protein N-term), Xlink:DTBP[172] (K), Xlink:DTBP[172] (Protein N-term), Xlink:DTBP[87] (K), Xlink:DTBP[87] (Protein N-term), Xlink:DTSSP[174] (K), Xlink:DTSSP[174] (Protein N-term), Xlink:DTSSP[192] (K), Xlink:DTSSP[192] (Protein N-term), Xlink:DTSSP[88] (K), Xlink:DTSSP[88] (Protein N-term), Xlink:EGS[115] (K), Xlink:EGS[115] (Protein N-term), Xlink:EGS[226] (K), Xlink:EGS[226] (Protein N-term), Xlink:EGS[244] (K), Xlink:EGS[244] (Protein N-term), Xlink:SMCC[219] (C), Xlink:SMCC[219] (K), Xlink:SMCC[219] (Protein N-term), Xlink:SMCC[237] (C), Xlink:SMCC[237] (K), Xlink:SMCC[237] (Protein N-term), Xlink:SMCC[321] (C), ZGB (K), ZGB (N-term), ZQG (K)

q_value_threshold1.0 The FDR (False Discovery Rate) threshold for filtering peptides. PSMs with q-values above this threshold will be excluded. Default: 1 (no filtering)

annotate_matchestrue Whether fragment ion matches should be annotated in the output. This provides additional information about which theoretical ions matched experimental peaks. Default: true(flag)

deisotopefalse Perform deisotoping and charge state deconvolution on MS2 spectra. Recommended for high-resolution MS2 data. May interfere with TMT-MS2 quantification. Default: false(flag)

chimerafalse Enable chimeric spectra search mode. When enabled, multiple peptide identifications can be reported for each MS2 scan, useful for co-fragmenting peptides. Default: false(flag)

predict_rtfalse Use retention time prediction model as a feature for machine learning scoring. Note: This is incompatible with label-free quantification (LFQ). Default: false(flag)

wide_windowfalse Enable wide-window/DIA search mode. When enabled, the precursor_tol parameter is ignored and a dynamic precursor tolerance is used. Default: false(flag)

smoothingtrue Whether to smooth the PTM (post-translational modification) mass histogram and pick local maxima. If false, uses raw histogram data. Default: true(flag)

reindextrue Recalculate peptide to protein association using OpenMS. Annotates target-decoy information.true, false

log Name of log file (created only when specified)

debug0 Sets the debug level

threads1 Sets the number of threads allowed to be used by the TOPP tool (0 = all available cores)

no_progressfalse Disables progress logging to command linetrue, false

forcefalse Overrides tool-specific checkstrue, false

testfalse Enables the test mode (needed for internal use only)true, false

+++PeptideIndexing

decoy_string std::string that was appended (or prefixed - see 'decoy_string_position' flag below) to the accessions in the protein database to indicate decoy proteins. If empty (default), it's determined automatically (checking for common terms, both as prefix and suffix).

decoy_string_positionprefix Is the 'decoy_string' prepended (prefix) or appended (suffix) to the protein accession? (ignored if decoy_string is empty)prefix, suffix

missing_decoy_actionwarn Action to take if NO peptide was assigned to a decoy protein (which indicates wrong database or decoy string): 'error' (exit with error, no output), 'warn' (exit with success, warning message), 'silent' (no action is taken, not even a warning)error, warn, silent

write_protein_sequencefalse If set, the protein sequences are stored as well.true, false

write_protein_descriptionfalse If set, the protein description is stored as well.true, false

keep_unreferenced_proteinsfalse If set, protein hits which are not referenced by any peptide are kept.true, false

unmatched_actionerror If peptide sequences cannot be matched to any protein: 1) raise an error; 2) warn (unmatched PepHits will miss target/decoy annotation with downstream problems); 3) remove the hit.error, warn, remove

aaa_max3 Maximal number of ambiguous amino acids (AAAs) allowed when matching to a protein database with AAAs. AAAs are 'B', 'J', 'Z' and 'X'.0:10

mismatches_max0 Maximal number of mismatched (mm) amino acids allowed when matching to a protein database. The required runtime is exponential in the number of mm's; apply with care. MM's are allowed in addition to AAA's.0:10

IL_equivalentfalse Treat the isobaric amino acids isoleucine ('I') and leucine ('L') as equivalent (indistinguishable). Also occurrences of 'J' will be treated as 'I' thus avoiding ambiguous matching.true, false

allow_nterm_protein_cleavagetrue Allow the protein N-terminus amino acid to clip.true, false

++++enzyme

nameauto Enzyme which determines valid cleavage sites - e.g. trypsin cleaves after lysine (K) or arginine (R), but not before proline (P). Default: deduce from inputauto, unspecific cleavage, Glu-C+P, PepsinA + P, cyanogen-bromide, Clostripain/P, Arg-C/P, no cleavage, proline-endopeptidase/HKR, Alpha-lytic protease, Asp-N, elastase-trypsin-chymotrypsin, Arg-C, glutamyl endopeptidase, staphylococcal protease/D, proline endopeptidase, leukocyte elastase, V8-E, V8-DE, Trypsin/P, Trypsin, iodosobenzoate, TrypChymo, Asp-N_ambic, 2-iodobenzoate, PepsinA, Lys-C/P, Lys-N, Lys-C, Formic_acid, CNBr, Chymotrypsin/P, Chymotrypsin, Asp-N/B

specificityauto Specificity of the enzyme. Default: deduce from input.
'full': both internal cleavage sites must match.
'semi': one of two internal cleavage sites must match.
'none': allow all peptide hits no matter their context (enzyme is irrelevant).auto, full, semi, none