AbsoluteQuantitationStandardsFile.h

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// --------------------------------------------------------------------------
//                   OpenMS -- Open-Source Mass Spectrometry
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// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2018.
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// This software is released under a three-clause BSD license:
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// $Maintainer: Douglas McCloskey, Pasquale Domenico Colaianni $
// $Authors: Douglas McCloskey, Pasquale Domenico Colaianni $
// --------------------------------------------------------------------------

#pragma once

#include <OpenMS/config.h> // OPENMS_DLLAPI
#include <OpenMS/FORMAT/CsvFile.h>
#include <OpenMS/METADATA/AbsoluteQuantitationStandards.h>

namespace OpenMS
{
  class OPENMS_DLLAPI AbsoluteQuantitationStandardsFile
  {
public:
    AbsoluteQuantitationStandardsFile() = default;
    virtual ~AbsoluteQuantitationStandardsFile() = default;

    void load(
      const String& filename,
      std::vector<AbsoluteQuantitationStandards::runConcentration>& run_concentrations
    ) const;

protected:
    AbsoluteQuantitationStandards::runConcentration extractRunFromLine_(
      const StringList& line,
      const std::map<String, Size>& headers
    ) const;
  };
}