CVMappingFile.h

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// --------------------------------------------------------------------------
//                   OpenMS -- Open-Source Mass Spectrometry
// --------------------------------------------------------------------------
// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2018.
//
// This software is released under a three-clause BSD license:
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//  * Redistributions in binary form must reproduce the above copyright
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//    may be used to endorse or promote products derived from this software
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// For a full list of authors, refer to the file AUTHORS.
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// $Maintainer: Timo Sachsenberg $
// $Authors: Andreas Bertsch $
// --------------------------------------------------------------------------

#pragma once

#include <OpenMS/FORMAT/XMLFile.h>
#include <OpenMS/FORMAT/HANDLERS/XMLHandler.h>
#include <OpenMS/DATASTRUCTURES/CVMappings.h>
#include <OpenMS/DATASTRUCTURES/CVMappingRule.h>

#include <vector>

namespace OpenMS
{
  class String;

  class OPENMS_DLLAPI CVMappingFile :
    protected Internal::XMLHandler,
    public Internal::XMLFile
  {
public:

    CVMappingFile();

    ~CVMappingFile() override;

    void load(const String& filename, CVMappings& cv_mappings, bool strip_namespaces = false);

protected:

    // Docu in base class
    void startElement(const XMLCh* const /*uri*/, const XMLCh* const /*local_name*/, const XMLCh* const qname, const xercesc::Attributes& attributes) override;

    // Docu in base class
    void endElement(const XMLCh* const /*uri*/, const XMLCh* const /*local_name*/, const XMLCh* const qname) override;

    // Docu in base class
    void characters(const XMLCh* const chars, const XMLSize_t /*length*/) override;

private:

    CVMappingFile(const CVMappingFile& rhs);

    CVMappingFile& operator=(const CVMappingFile& rhs);

    String tag_;

    bool strip_namespaces_;

    CVMappingRule actual_rule_;

    std::vector<CVMappingRule> rules_;

    std::vector<CVReference> cv_references_;

  };

} // namespace OpenMS