DeNovoIdentification.h

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//                   OpenMS -- Open-Source Mass Spectrometry
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// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
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// $Maintainer: Timo Sachsenberg $
// $Authors: Sandro Andreotti, Andreas Bertsch$
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#pragma once

#include <OpenMS/DATASTRUCTURES/DefaultParamHandler.h>
#include <OpenMS/METADATA/PeptideIdentification.h>
#include <OpenMS/KERNEL/StandardTypes.h>
#include <vector>

namespace OpenMS
{
  class OPENMS_DLLAPI DeNovoIdentification :
    public DefaultParamHandler
  {
public:

    DeNovoIdentification();

    ~DeNovoIdentification() override;

    DeNovoIdentification(const DeNovoIdentification & rhs);

    DeNovoIdentification & operator=(const DeNovoIdentification & rhs);

    virtual void getIdentifications(std::vector<PeptideIdentification> & ids, const PeakMap & exp) = 0;

    virtual void getIdentification(PeptideIdentification & id, const PeakSpectrum & spectrum) = 0;

  };

} // namespace OpenMS