FeatureFinderDefs.h

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// --------------------------------------------------------------------------
//                   OpenMS -- Open-Source Mass Spectrometry
// --------------------------------------------------------------------------
// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2018.
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// $Maintainer: Timo Sachsenberg $
// $Authors: $
// --------------------------------------------------------------------------

#pragma once


#include <OpenMS/DATASTRUCTURES/IsotopeCluster.h>
#include <OpenMS/DATASTRUCTURES/String.h>
#include <OpenMS/CONCEPT/Exception.h>
#include <OpenMS/CONCEPT/GlobalExceptionHandler.h>

namespace OpenMS
{

  // forward declaration
  class FeatureFinder;

  struct OPENMS_DLLAPI FeatureFinderDefs
  {
    typedef IsotopeCluster::IndexPair IndexPair;

    typedef IsotopeCluster::ChargedIndexSet ChargedIndexSet;

    typedef IsotopeCluster::IndexSet IndexSet;

    enum Flag {UNUSED, USED};

    class OPENMS_DLLAPI NoSuccessor :
      public Exception::BaseException
    {
public:
      NoSuccessor(const char * file, int line, const char * function, const IndexPair & index) :
        BaseException(file, line, function, "NoSuccessor", "no successor/predecessor"),
        index_(index)
      {
        what_ = String("there is no successor/predecessor for the given Index: ") + index_.first + "/" + index_.second;
        Exception::GlobalExceptionHandler::getInstance().setMessage(what_);
      }

      ~NoSuccessor() throw() override
      {
      }

protected:
      IndexPair index_;            // index without successor/predecessor
    };
  };
}