#include <OpenMS/APPLICATIONS/TOPPBase.h>
#include <OpenMS/CONCEPT/Factory.h>
#include <OpenMS/DATASTRUCTURES/Param.h>
#include <OpenMS/FORMAT/MzMLFile.h>
#include <OpenMS/SYSTEM/File.h>
#include <QtCore/QProcess>
#include <QFileInfo>
#include <QDir>
#include <typeinfo>