47 class PeptideIdentification;
48 class ProteinIdentification;
79 void makePrecursorSelectionForKnownLCMSMap(
const FeatureMap& features,
82 std::set<Int>& charges_set,
94 std::vector<std::vector<std::pair<Size, Size> > >& indices);
101 std::cout <<
" LPSolver set to " << solver_ << std::endl;
116 void calculateXICs_(
const FeatureMap& features,
117 const std::vector<std::vector<std::pair<Size, Size> > >& mass_ranges,
119 const std::set<Int>& charges_set,
120 std::vector<std::vector<std::pair<Size, double> > >& xics);
125 void checkMassRanges_(std::vector<std::vector<std::pair<Size, Size> > >& mass_ranges,
A more convenient string class.
Definition: String.h:57
SOLVER
Definition: LPWrapper.h:130
A container for features.
Definition: FeatureMap.h:93
LPWrapper::SOLVER getLPSolver()
Definition: OfflinePrecursorIonSelection.h:104
std::map< std::pair< double, double >, int, PairComparatorSecondElement< std::pair< double, double > > > ExclusionListType_
Definition: OfflinePrecursorIonSelection.h:111
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:46
LPWrapper::SOLVER solver_
Definition: OfflinePrecursorIonSelection.h:131
void setLPSolver(LPWrapper::SOLVER solver)
Definition: OfflinePrecursorIonSelection.h:98
In-Memory representation of a mass spectrometry experiment.
Definition: MSExperiment.h:77
Implements different algorithms for precursor ion selection.
Definition: OfflinePrecursorIonSelection.h:61
Class for comparison of std::pair using second ONLY e.g. for use with std::sort.
Definition: ComparatorUtils.h:339
A base class for all classes handling default parameters.
Definition: DefaultParamHandler.h:91
PSLPFormulation::IndexTriple IndexTriple
Definition: OfflinePrecursorIonSelection.h:65