OpenMS  2.4.0
MzMLSqliteHandler Member List

This is the complete list of members for MzMLSqliteHandler, including all inherited members.

chrom_id_MzMLSqliteHandlerprotected
createIndices()MzMLSqliteHandler
createTables()MzMLSqliteHandler
executeBlobBind_(sqlite3 *db, String &prepare_statement, std::vector< String > &data)MzMLSqliteHandlerprotected
executeSql_(sqlite3 *db, const std::stringstream &statement)MzMLSqliteHandlerprotected
filename_MzMLSqliteHandlerprotected
getNrChromatograms() constMzMLSqliteHandler
getNrSpectra() constMzMLSqliteHandler
getSpectraIndicesbyRT(double RT, double deltaRT, const std::vector< int > &indices) constMzMLSqliteHandler
linear_abs_mass_acc_MzMLSqliteHandlerprotected
MzMLSqliteHandler(String filename)MzMLSqliteHandler
openDB() constMzMLSqliteHandlerprotected
populateChromatogramsWithData_(sqlite3 *db, std::vector< MSChromatogram > &chromatograms) constMzMLSqliteHandlerprotected
populateChromatogramsWithData_(sqlite3 *db, std::vector< MSChromatogram > &chromatograms, const std::vector< int > &indices) constMzMLSqliteHandlerprotected
populateSpectraWithData_(sqlite3 *db, std::vector< MSSpectrum > &spectra) constMzMLSqliteHandlerprotected
populateSpectraWithData_(sqlite3 *db, std::vector< MSSpectrum > &spectra, const std::vector< int > &indices) constMzMLSqliteHandlerprotected
prepareChroms_(sqlite3 *db, std::vector< MSChromatogram > &chromatograms) constMzMLSqliteHandlerprotected
prepareSpectra_(sqlite3 *db, std::vector< MSSpectrum > &spectra) constMzMLSqliteHandlerprotected
readChromatograms(std::vector< MSChromatogram > &exp, const std::vector< int > &indices, bool meta_only=false) constMzMLSqliteHandler
readExperiment(MSExperiment &exp, bool meta_only=false) constMzMLSqliteHandler
readSpectra(std::vector< MSSpectrum > &exp, const std::vector< int > &indices, bool meta_only=false) constMzMLSqliteHandler
run_id_MzMLSqliteHandlerprotected
setConfig(bool write_full_meta, bool use_lossy_compression, double linear_abs_mass_acc, int sql_batch_size=500)MzMLSqliteHandlerinline
spec_id_MzMLSqliteHandlerprotected
sql_batch_size_MzMLSqliteHandlerprotected
use_lossy_compression_MzMLSqliteHandlerprotected
write_full_meta_MzMLSqliteHandlerprotected
writeChromatograms(const std::vector< MSChromatogram > &chroms)MzMLSqliteHandler
writeExperiment(const MSExperiment &exp)MzMLSqliteHandler
writeRunLevelInformation(const MSExperiment &exp, bool write_full_meta, int run_id)MzMLSqliteHandler
writeSpectra(const std::vector< MSSpectrum > &spectra)MzMLSqliteHandler