OpenMS  2.4.0
MRMTransitionGroupPicker Member List

This is the complete list of members for MRMTransitionGroupPicker, including all inherited members.

background_subtraction_MRMTransitionGroupPickerprotected
boundary_selection_method_MRMTransitionGroupPickerprotected
check_defaults_DefaultParamHandlerprotected
compute_peak_quality_MRMTransitionGroupPickerprotected
compute_peak_shape_metrics_MRMTransitionGroupPickerprotected
compute_total_mi_MRMTransitionGroupPickerprotected
computeQuality_(const MRMTransitionGroup< SpectrumT, TransitionT > &transition_group, const std::vector< SpectrumT > &picked_chroms, const int chr_idx, const double best_left, const double best_right, String &outlier)MRMTransitionGroupPickerinlineprotected
createMRMFeature(const MRMTransitionGroup< SpectrumT, TransitionT > &transition_group, std::vector< SpectrumT > &picked_chroms, const std::vector< SpectrumT > &smoothed_chroms, const int chr_idx, const int peak_idx)MRMTransitionGroupPickerinline
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
error_name_DefaultParamHandlerprotected
findLargestPeak(const std::vector< MSChromatogram > &picked_chroms, int &chr_idx, int &peak_idx)MRMTransitionGroupPicker
findWidestPeakIndices(const std::vector< MSChromatogram > &picked_chroms, Int &chrom_idx, Int &point_idx) constMRMTransitionGroupPicker
getDefaults() constDefaultParamHandler
getName() constDefaultParamHandler
getParameters() constDefaultParamHandler
getSubsections() constDefaultParamHandler
min_peak_width_MRMTransitionGroupPickerprotected
min_qual_MRMTransitionGroupPickerprotected
MRMTransitionGroupPicker()MRMTransitionGroupPicker
operator=(const MRMTransitionGroupPicker &rhs)MRMTransitionGroupPickerprotected
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
operator==(const DefaultParamHandler &rhs) constDefaultParamHandlervirtual
param_DefaultParamHandlerprotected
peak_integration_MRMTransitionGroupPickerprotected
pi_MRMTransitionGroupPickerprotected
picker_MRMTransitionGroupPickerprotected
pickTransitionGroup(MRMTransitionGroup< SpectrumT, TransitionT > &transition_group)MRMTransitionGroupPickerinline
prepareMasterContainer_(const SpectrumT &ref_chromatogram, SpectrumT &master_peak_container, double left_boundary, double right_boundary)MRMTransitionGroupPickerinlineprotected
recalculate_peaks_MRMTransitionGroupPickerprotected
recalculate_peaks_max_z_MRMTransitionGroupPickerprotected
recalculatePeakBorders_(const std::vector< SpectrumT > &picked_chroms, double &best_left, double &best_right, double max_z)MRMTransitionGroupPickerinlineprotected
remove_overlapping_features(std::vector< SpectrumT > &picked_chroms, double best_left, double best_right)MRMTransitionGroupPickerinline
resample_boundary_MRMTransitionGroupPickerprotected
resampleChromatogram_(const SpectrumT &chromatogram, const SpectrumT &master_peak_container, double left_boundary, double right_boundary)MRMTransitionGroupPickerinlineprotected
selectChromHelper_(const MRMTransitionGroup< SpectrumT, TransitionT > &transition_group, const String &native_id)MRMTransitionGroupPickerinlineprotected
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
stop_after_feature_MRMTransitionGroupPickerprotected
stop_after_intensity_ratio_MRMTransitionGroupPickerprotected
subsections_DefaultParamHandlerprotected
updateMembers_() overrideMRMTransitionGroupPickerprotectedvirtual
use_consensus_MRMTransitionGroupPickerprotected
use_precursors_MRMTransitionGroupPickerprotected
warn_empty_defaults_DefaultParamHandlerprotected
~DefaultParamHandler()DefaultParamHandlervirtual
~MRMTransitionGroupPicker() overrideMRMTransitionGroupPicker
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