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OPXLSpectrumProcessingAlgorithms Member List

This is the complete list of members for OPXLSpectrumProcessingAlgorithms, including all inherited members.

deisotopeAndSingleChargeMSSpectrum(PeakSpectrum &old_spectrum, Int min_charge, Int max_charge, double fragment_tolerance, bool fragment_tolerance_unit_ppm, bool keep_only_deisotoped=false, Size min_isopeaks=3, Size max_isopeaks=10, bool make_single_charged=false)OPXLSpectrumProcessingAlgorithmsstatic
getSpectrumAlignmentFastCharge(std::vector< std::pair< Size, Size > > &alignment, double fragment_mass_tolerance, bool fragment_mass_tolerance_unit_ppm, const PeakSpectrum &theo_spectrum, const PeakSpectrum &exp_spectrum, const DataArrays::IntegerDataArray &theo_charges, const DataArrays::IntegerDataArray &exp_charges, DataArrays::FloatDataArray &ppm_error_array, double intensity_cutoff=0.0)OPXLSpectrumProcessingAlgorithmsstatic
mergeAnnotatedSpectra(PeakSpectrum &first_spectrum, PeakSpectrum &second_spectrum)OPXLSpectrumProcessingAlgorithmsstatic
preprocessSpectra(PeakMap &exp, double fragment_mass_tolerance, bool fragment_mass_tolerance_unit_ppm, Size peptide_min_size, Int min_precursor_charge, Int max_precursor_charge, bool deisotope, bool labeled)OPXLSpectrumProcessingAlgorithmsstatic
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