OfflinePrecursorIonSelection Member List

This is the complete list of members for OfflinePrecursorIonSelection, including all inherited members.

calculateXICs_(const FeatureMap &features, const std::vector< std::vector< std::pair< Size, Size > > > &mass_ranges, const PeakMap &experiment, const std::set< Int > &charges_set, std::vector< std::vector< std::pair< Size, double > > > &xics)	OfflinePrecursorIonSelection	private
check_defaults_	DefaultParamHandler	protected
checkMassRanges_(std::vector< std::vector< std::pair< Size, Size > > > &mass_ranges, const PeakMap &experiment)	OfflinePrecursorIonSelection	private
createProteinSequenceBasedLPInclusionList(String include, String rt_model_file, String pt_model_file, FeatureMap &precursors)	OfflinePrecursorIonSelection
DefaultParamHandler(const String &name)	DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)	DefaultParamHandler
defaults_	DefaultParamHandler	protected
defaultsToParam_()	DefaultParamHandler	protected
error_name_	DefaultParamHandler	protected
ExclusionListType_ typedef	OfflinePrecursorIonSelection	private
getDefaults() const	DefaultParamHandler
getLPSolver()	OfflinePrecursorIonSelection	inline
getMassRanges(const FeatureMap &features, const PeakMap &experiment, std::vector< std::vector< std::pair< Size, Size > > > &indices)	OfflinePrecursorIonSelection
getName() const	DefaultParamHandler
getParameters() const	DefaultParamHandler
getSubsections() const	DefaultParamHandler
IndexTriple typedef	OfflinePrecursorIonSelection
makePrecursorSelectionForKnownLCMSMap(const FeatureMap &features, const PeakMap &experiment, PeakMap &ms2, std::set< Int > &charges_set, bool feature_based)	OfflinePrecursorIonSelection
OfflinePrecursorIonSelection()	OfflinePrecursorIonSelection
operator=(const DefaultParamHandler &rhs)	DefaultParamHandler	virtual
operator==(const DefaultParamHandler &rhs) const	DefaultParamHandler	virtual
param_	DefaultParamHandler	protected
setLPSolver(LPWrapper::SOLVER solver)	OfflinePrecursorIonSelection	inline
setName(const String &name)	DefaultParamHandler
setParameters(const Param &param)	DefaultParamHandler
solver_	OfflinePrecursorIonSelection	private
subsections_	DefaultParamHandler	protected
updateExclusionList_(ExclusionListType_ &exclusion_list) const	OfflinePrecursorIonSelection	private
updateMembers_()	DefaultParamHandler	protectedvirtual
warn_empty_defaults_	DefaultParamHandler	protected
~DefaultParamHandler()	DefaultParamHandler	virtual
~OfflinePrecursorIonSelection() override	OfflinePrecursorIonSelection