PeakIntegrator Member List

This is the complete list of members for PeakIntegrator, including all inherited members.

baseline_type_	PeakIntegrator	private
BASELINE_TYPE_BASETOBASE	PeakIntegrator	static
BASELINE_TYPE_VERTICALDIVISION	PeakIntegrator	static
BASELINE_TYPE_VERTICALDIVISION_MAX	PeakIntegrator	static
BASELINE_TYPE_VERTICALDIVISION_MIN	PeakIntegrator	static
calculatePeakShapeMetrics(const MSChromatogram &chromatogram, const double left, const double right, const double peak_height, const double peak_apex_pos) const	PeakIntegrator
calculatePeakShapeMetrics(const MSChromatogram &chromatogram, MSChromatogram::ConstIterator &left, MSChromatogram::ConstIterator &right, const double peak_height, const double peak_apex_pos) const	PeakIntegrator
calculatePeakShapeMetrics(const MSSpectrum &spectrum, const double left, const double right, const double peak_height, const double peak_apex_pos) const	PeakIntegrator
calculatePeakShapeMetrics(const MSSpectrum &spectrum, MSSpectrum::ConstIterator &left, MSSpectrum::ConstIterator &right, const double peak_height, const double peak_apex_pos) const	PeakIntegrator
calculatePeakShapeMetrics_(const PeakContainerT &pc, double left, double right, const double peak_height, const double peak_apex_pos) const	PeakIntegrator	protected
check_defaults_	DefaultParamHandler	protected
DefaultParamHandler(const String &name)	DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)	DefaultParamHandler
defaults_	DefaultParamHandler	protected
defaultsToParam_()	DefaultParamHandler	protected
emg_	PeakIntegrator	private
EMGPreProcess_(const PeakContainerT &pc, PeakContainerT &emg_pc, double &left, double &right) const	PeakIntegrator	private
error_name_	DefaultParamHandler	protected
estimateBackground(const MSChromatogram &chromatogram, const double left, const double right, const double peak_apex_pos) const	PeakIntegrator
estimateBackground(const MSChromatogram &chromatogram, MSChromatogram::ConstIterator &left, MSChromatogram::ConstIterator &right, const double peak_apex_pos) const	PeakIntegrator
estimateBackground(const MSSpectrum &spectrum, const double left, const double right, const double peak_apex_pos) const	PeakIntegrator
estimateBackground(const MSSpectrum &spectrum, MSSpectrum::ConstIterator &left, MSSpectrum::ConstIterator &right, const double peak_apex_pos) const	PeakIntegrator
estimateBackground_(const PeakContainerT &pc, double left, double right, const double peak_apex_pos) const	PeakIntegrator	protected
findPosAtPeakHeightPercent_(PeakContainerConstIteratorT it_begin, PeakContainerConstIteratorT it_end, const double peak_height, const double percent, const bool is_left_half) const	PeakIntegrator	protected
fit_EMG_	PeakIntegrator	private
getDefaultParameters(Param &params)	PeakIntegrator
getDefaults() const	DefaultParamHandler
getName() const	DefaultParamHandler
getParameters() const	DefaultParamHandler
getSubsections() const	DefaultParamHandler
integratePeak(const MSChromatogram &chromatogram, const double left, const double right) const	PeakIntegrator
integratePeak(const MSChromatogram &chromatogram, MSChromatogram::ConstIterator &left, MSChromatogram::ConstIterator &right) const	PeakIntegrator
integratePeak(const MSSpectrum &spectrum, const double left, const double right) const	PeakIntegrator
integratePeak(const MSSpectrum &spectrum, MSSpectrum::ConstIterator &left, MSSpectrum::ConstIterator &right) const	PeakIntegrator
integratePeak_(const PeakContainerT &pc, double left, double right) const	PeakIntegrator	protected
integration_type_	PeakIntegrator	private
INTEGRATION_TYPE_INTENSITYSUM	PeakIntegrator	static
INTEGRATION_TYPE_SIMPSON	PeakIntegrator	static
INTEGRATION_TYPE_TRAPEZOID	PeakIntegrator	static
operator=(const DefaultParamHandler &rhs)	DefaultParamHandler	virtual
operator==(const DefaultParamHandler &rhs) const	DefaultParamHandler	virtual
param_	DefaultParamHandler	protected
PeakIntegrator()	PeakIntegrator
setName(const String &name)	DefaultParamHandler
setParameters(const Param &param)	DefaultParamHandler
simpson(MSChromatogram::ConstIterator it_begin, MSChromatogram::ConstIterator it_end) const	PeakIntegrator	private
simpson(MSSpectrum::ConstIterator it_begin, MSSpectrum::ConstIterator it_end) const	PeakIntegrator	private
simpson_(PeakContainerConstIteratorT it_begin, PeakContainerConstIteratorT it_end) const	PeakIntegrator	protected
subsections_	DefaultParamHandler	protected
updateMembers_()	PeakIntegrator	protectedvirtual
warn_empty_defaults_	DefaultParamHandler	protected
~DefaultParamHandler()	DefaultParamHandler	virtual
~PeakIntegrator()	PeakIntegrator	virtual