OpenMS
2.4.0
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This is the complete list of members for MRMScoring, including all inherited members.
calcIndMIIdScore() | MRMScoring | |
calcIndSNScore(OpenSwath::IMRMFeature *mrmfeature, std::vector< OpenSwath::ISignalToNoisePtr > &signal_noise_estimators) | MRMScoring | static |
calcIndXcorrIdCoelutionScore() | MRMScoring | |
calcIndXcorrIdShape_score() | MRMScoring | |
calcLibraryScore(OpenSwath::IMRMFeature *mrmfeature, const std::vector< TransitionType > &transitions, double &correlation, double &norm_manhattan, double &manhattan, double &dotprod, double &spectral_angle, double &rmsd) | MRMScoring | static |
calcMIScore() | MRMScoring | |
calcMIScore_weighted(const std::vector< double > &normalized_library_intensity) | MRMScoring | |
calcMS1MIScore() | MRMScoring | |
calcMS1XcorrCoelutionScore() | MRMScoring | |
calcMS1XcorrShape_score() | MRMScoring | |
calcRTScore(const PeptideType &peptide, double normalized_experimental_rt) | MRMScoring | static |
calcSNScore(OpenSwath::IMRMFeature *mrmfeature, std::vector< OpenSwath::ISignalToNoisePtr > &signal_noise_estimators) | MRMScoring | static |
calcXcorrCoelutionScore() | MRMScoring | |
calcXcorrCoelutionScore_weighted(const std::vector< double > &normalized_library_intensity) | MRMScoring | |
calcXcorrShape_score() | MRMScoring | |
calcXcorrShape_score_weighted(const std::vector< double > &normalized_library_intensity) | MRMScoring | |
FeatureType typedef | MRMScoring | |
getMIMatrix() const | MRMScoring | |
getXCorrMatrix() const | MRMScoring | |
initializeMIIdMatrix(OpenSwath::IMRMFeature *mrmfeature, std::vector< String > native_ids_identification, std::vector< String > native_ids_detection) | MRMScoring | |
initializeMIMatrix(OpenSwath::IMRMFeature *mrmfeature, std::vector< String > native_ids) | MRMScoring | |
initializeMS1MI(OpenSwath::IMRMFeature *mrmfeature, std::vector< String > native_ids, std::string precursor_id) | MRMScoring | |
initializeMS1XCorr(OpenSwath::IMRMFeature *mrmfeature, const std::vector< String > &native_ids, const std::string &precursor_id) | MRMScoring | |
initializeXCorrIdMatrix(OpenSwath::IMRMFeature *mrmfeature, const std::vector< String > &native_ids_identification, const std::vector< String > &native_ids_detection) | MRMScoring | |
initializeXCorrMatrix(OpenSwath::IMRMFeature *mrmfeature, const std::vector< String > &native_ids) | MRMScoring | |
mi_matrix_ | MRMScoring | private |
ms1_mi_vector_ | MRMScoring | private |
ms1_xcorr_vector_ | MRMScoring | private |
PeptideType typedef | MRMScoring | |
ProteinType typedef | MRMScoring | |
SpectrumType typedef | MRMScoring | |
String typedef | MRMScoring | |
TransitionType typedef | MRMScoring | |
xcorr_matrix_ | MRMScoring | private |
XCorrArrayType typedef | MRMScoring | |
XCorrMatrixType typedef | MRMScoring |