OpenMS  2.4.0
MRMScoring Member List

This is the complete list of members for MRMScoring, including all inherited members.

calcIndMIIdScore()MRMScoring
calcIndSNScore(OpenSwath::IMRMFeature *mrmfeature, std::vector< OpenSwath::ISignalToNoisePtr > &signal_noise_estimators)MRMScoringstatic
calcIndXcorrIdCoelutionScore()MRMScoring
calcIndXcorrIdShape_score()MRMScoring
calcLibraryScore(OpenSwath::IMRMFeature *mrmfeature, const std::vector< TransitionType > &transitions, double &correlation, double &norm_manhattan, double &manhattan, double &dotprod, double &spectral_angle, double &rmsd)MRMScoringstatic
calcMIScore()MRMScoring
calcMIScore_weighted(const std::vector< double > &normalized_library_intensity)MRMScoring
calcMS1MIScore()MRMScoring
calcMS1XcorrCoelutionScore()MRMScoring
calcMS1XcorrShape_score()MRMScoring
calcRTScore(const PeptideType &peptide, double normalized_experimental_rt)MRMScoringstatic
calcSNScore(OpenSwath::IMRMFeature *mrmfeature, std::vector< OpenSwath::ISignalToNoisePtr > &signal_noise_estimators)MRMScoringstatic
calcXcorrCoelutionScore()MRMScoring
calcXcorrCoelutionScore_weighted(const std::vector< double > &normalized_library_intensity)MRMScoring
calcXcorrShape_score()MRMScoring
calcXcorrShape_score_weighted(const std::vector< double > &normalized_library_intensity)MRMScoring
FeatureType typedefMRMScoring
getMIMatrix() constMRMScoring
getXCorrMatrix() constMRMScoring
initializeMIIdMatrix(OpenSwath::IMRMFeature *mrmfeature, std::vector< String > native_ids_identification, std::vector< String > native_ids_detection)MRMScoring
initializeMIMatrix(OpenSwath::IMRMFeature *mrmfeature, std::vector< String > native_ids)MRMScoring
initializeMS1MI(OpenSwath::IMRMFeature *mrmfeature, std::vector< String > native_ids, std::string precursor_id)MRMScoring
initializeMS1XCorr(OpenSwath::IMRMFeature *mrmfeature, const std::vector< String > &native_ids, const std::string &precursor_id)MRMScoring
initializeXCorrIdMatrix(OpenSwath::IMRMFeature *mrmfeature, const std::vector< String > &native_ids_identification, const std::vector< String > &native_ids_detection)MRMScoring
initializeXCorrMatrix(OpenSwath::IMRMFeature *mrmfeature, const std::vector< String > &native_ids)MRMScoring
mi_matrix_MRMScoringprivate
ms1_mi_vector_MRMScoringprivate
ms1_xcorr_vector_MRMScoringprivate
PeptideType typedefMRMScoring
ProteinType typedefMRMScoring
SpectrumType typedefMRMScoring
String typedefMRMScoring
TransitionType typedefMRMScoring
xcorr_matrix_MRMScoringprivate
XCorrArrayType typedefMRMScoring
XCorrMatrixType typedefMRMScoring