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OpenMS
OPENSWATHALGO
DATAACCESS
SwathMap.h
Go to the documentation of this file.
1
// --------------------------------------------------------------------------
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// OpenMS -- Open-Source Mass Spectrometry
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// --------------------------------------------------------------------------
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// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
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// ETH Zurich, and Freie Universitaet Berlin 2002-2020.
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//
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// This software is released under a three-clause BSD license:
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// * Redistributions of source code must retain the above copyright
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// notice, this list of conditions and the following disclaimer.
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// * Redistributions in binary form must reproduce the above copyright
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// notice, this list of conditions and the following disclaimer in the
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// documentation and/or other materials provided with the distribution.
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// * Neither the name of any author or any participating institution
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// may be used to endorse or promote products derived from this software
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// without specific prior written permission.
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// For a full list of authors, refer to the file AUTHORS.
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// --------------------------------------------------------------------------
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// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
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// ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
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// INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
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// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
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// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
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// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
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// WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
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// OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
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// ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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//
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// --------------------------------------------------------------------------
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// $Maintainer: Hannes Roest $
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// $Authors: Hannes Roest $
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// --------------------------------------------------------------------------
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#pragma once
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#include <
OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h
>
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namespace
OpenSwath
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{
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struct
SwathMap
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{
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OpenSwath::SpectrumAccessPtr
sptr
;
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double
lower
;
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double
upper
;
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double
center
;
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bool
ms1
;
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SwathMap
() :
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lower
(0.0),
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upper
(0.0),
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center
(0.0),
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ms1
(false)
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{}
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SwathMap
(
double
mz_start,
double
mz_end,
double
mz_center,
bool
is_ms1)
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:
lower
(mz_start),
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upper
(mz_end),
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center
(mz_center),
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ms1
(is_ms1)
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{}
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};
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}
//end Namespace OpenSwath
70
OpenSwath::SwathMap::lower
double lower
Definition:
SwathMap.h:48
OpenSwath::SwathMap::center
double center
Definition:
SwathMap.h:50
OpenSwath::SwathMap::SwathMap
SwathMap(double mz_start, double mz_end, double mz_center, bool is_ms1)
Definition:
SwathMap.h:60
OpenSwath::SwathMap
Data structure to hold one SWATH map with information about upper / lower isolation window and whethe...
Definition:
SwathMap.h:45
OpenSwath::SwathMap::SwathMap
SwathMap()
Definition:
SwathMap.h:53
OpenSwath::SwathMap::ms1
bool ms1
Definition:
SwathMap.h:51
OpenSwath::SwathMap::upper
double upper
Definition:
SwathMap.h:49
OpenSwath::SwathMap::sptr
OpenSwath::SpectrumAccessPtr sptr
Definition:
SwathMap.h:47
OpenSwath::SpectrumAccessPtr
boost::shared_ptr< ISpectrumAccess > SpectrumAccessPtr
Definition:
openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:89
ISpectrumAccess.h
OpenSwath
Definition:
MRMScoring.h:49
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