IDFilter.h File Reference

#include <OpenMS/config.h>
#include <OpenMS/CHEMISTRY/ProteaseDigestion.h>
#include <OpenMS/CONCEPT/LogStream.h>
#include <OpenMS/FORMAT/FASTAFile.h>
#include <OpenMS/KERNEL/MSExperiment.h>
#include <OpenMS/KERNEL/StandardTypes.h>
#include <OpenMS/METADATA/PeptideIdentification.h>
#include <OpenMS/METADATA/PeptideEvidence.h>
#include <OpenMS/METADATA/ProteinIdentification.h>
#include <OpenMS/METADATA/ID/IdentificationData.h>
#include <algorithm>
#include <climits>
#include <vector>
#include <set>
#include <map>
#include <unordered_set>

Go to the source code of this file.

Classes
class	IDFilter
	Collection of functions for filtering peptide and protein identifications. More...
struct	IDFilter::HasGoodScore< HitType >
	Is the score of this hit at least as good as the given value? More...
struct	IDFilter::HasMaxRank< HitType >
	Is the rank of this hit below or at the given cut-off? More...
struct	IDFilter::HasMetaValue< HitType >
	Is a meta value with given key and value set on this hit? More...
struct	IDFilter::HasMaxMetaValue< HitType >
	Does a meta value of this hit have at most the given value? More...
struct	IDFilter::HasDecoyAnnotation< HitType >
	Is this a decoy hit? More...
struct	IDFilter::HasMatchingAccessionUnordered< HitType >
	Given a list of protein accessions, do any occur in the annotation(s) of this hit? More...
struct	IDFilter::HasMatchingAccession< HitType >
	Given a list of protein accessions, do any occur in the annotation(s) of this hit? More...
struct	IDFilter::GetMatchingItems< HitType, Entry >
	Builds a map index of data that have a String index to find matches and return the objects. More...
class	IDFilter::PeptideDigestionFilter
	Filter Peptide Hit by its digestion product. More...
struct	IDFilter::DigestionFilter
	Is peptide evidence digestion product of some protein. More...
struct	IDFilter::HasNoHits< IdentificationType >
	Is the list of hits of this peptide/protein ID empty? More...

Namespaces
	OpenMS
	Main OpenMS namespace.