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OpenMS
FORMAT
CsvFile.h
Go to the documentation of this file.
1
// --------------------------------------------------------------------------
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// OpenMS -- Open-Source Mass Spectrometry
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// --------------------------------------------------------------------------
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// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
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// ETH Zurich, and Freie Universitaet Berlin 2002-2020.
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//
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// This software is released under a three-clause BSD license:
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// * Redistributions of source code must retain the above copyright
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// notice, this list of conditions and the following disclaimer.
10
// * Redistributions in binary form must reproduce the above copyright
11
// notice, this list of conditions and the following disclaimer in the
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// documentation and/or other materials provided with the distribution.
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// * Neither the name of any author or any participating institution
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// may be used to endorse or promote products derived from this software
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// without specific prior written permission.
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// For a full list of authors, refer to the file AUTHORS.
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// --------------------------------------------------------------------------
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// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
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// ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
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// INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
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// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
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// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
25
// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
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// WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
27
// OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
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// ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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//
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// --------------------------------------------------------------------------
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// $Maintainer: Timo Sachsenberg $
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// $Authors: David Wojnar $
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// --------------------------------------------------------------------------
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#pragma once
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#include <
OpenMS/FORMAT/TextFile.h
>
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#include <
OpenMS/DATASTRUCTURES/StringListUtils.h
>
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namespace
OpenMS
41
{
49
class
OPENMS_DLLAPI
CsvFile
:
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private
TextFile
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{
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public
:
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CsvFile
();
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~
CsvFile
()
override
;
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70
CsvFile
(
const
String
& filename,
char
is =
','
,
bool
ie =
false
,
Int
first_n = -1);
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82
void
load(
const
String
& filename,
char
is =
','
,
bool
ie =
false
,
Int
first_n = -1);
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void
store(
const
String
& filename);
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96
void
addRow(
const
StringList
& list);
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103
void
clear();
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115
bool
getRow(
Size
row,
StringList
& list);
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std::vector<String>::size_type rowCount()
const
;
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private
:
125
char
itemseperator_
;
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bool
itemenclosed_
;
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128
};
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}
// namespace OpenMS
131
OpenMS::Size
size_t Size
Size type e.g. used as variable which can hold result of size()
Definition:
Types.h:127
StringListUtils.h
OpenMS::TextFile
This class provides some basic file handling methods for text files.
Definition:
TextFile.h:46
OpenMS::StringList
std::vector< String > StringList
Vector of String.
Definition:
ListUtils.h:70
int
OpenMS::CsvFile::itemenclosed_
bool itemenclosed_
Definition:
CsvFile.h:126
TextFile.h
OpenMS::CsvFile
This class handles csv files. Currently only loading is implemented.
Definition:
CsvFile.h:49
OpenMS::String
A more convenient string class.
Definition:
String.h:58
OpenMS
Main OpenMS namespace.
Definition:
FeatureDeconvolution.h:46
OpenMS::CsvFile::itemseperator_
char itemseperator_
Definition:
CsvFile.h:125
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