This is the complete list of members for OpenSwathScoring, including all inherited members.

add_up_spectra_	OpenSwathScoring	private
calculateChromatographicIdScores(OpenSwath::IMRMFeature *imrmfeature, const std::vector< std::string > &native_ids_identification, const std::vector< std::string > &native_ids_detection, std::vector< OpenSwath::ISignalToNoisePtr > &signal_noise_estimators, OpenSwath_Ind_Scores &scores)	OpenSwathScoring
calculateChromatographicScores(OpenSwath::IMRMFeature *imrmfeature, const std::vector< std::string > &native_ids, const std::vector< std::string > &precursor_ids, const std::vector< double > &normalized_library_intensity, std::vector< OpenSwath::ISignalToNoisePtr > &signal_noise_estimators, OpenSwath_Scores &scores)	OpenSwathScoring
calculateDIAIdScores(OpenSwath::IMRMFeature *imrmfeature, const TransitionType &transition, const std::vector< OpenSwath::SwathMap > swath_maps, OpenMS::DIAScoring &diascoring, OpenSwath_Scores &scores, double drift_lower, double drift_upper)	OpenSwathScoring
calculateDIAScores(OpenSwath::IMRMFeature *imrmfeature, const std::vector< TransitionType > &transitions, const std::vector< OpenSwath::SwathMap > &swath_maps, OpenSwath::SpectrumAccessPtr ms1_map, OpenMS::DIAScoring &diascoring, const CompoundType &compound, OpenSwath_Scores &scores, std::vector< double > &mzerror_ppm, const double drift_lower, const double drift_upper, const double drift_target)	OpenSwathScoring
calculateLibraryScores(OpenSwath::IMRMFeature *imrmfeature, const std::vector< TransitionType > &transitions, const CompoundType &compound, const double normalized_feature_rt, OpenSwath_Scores &scores)	OpenSwathScoring
calculatePrecursorDIAScores(OpenSwath::SpectrumAccessPtr ms1_map, OpenMS::DIAScoring &diascoring, double precursor_mz, double rt, const CompoundType &compound, OpenSwath_Scores &scores, double drift_lower, double drift_upper)	OpenSwathScoring
CompoundType typedef	OpenSwathScoring	private
fetchSpectrumSwath(std::vector< OpenSwath::SwathMap > swath_maps, double RT, int nr_spectra_to_add, const double drift_lower, const double drift_upper)	OpenSwathScoring
fetchSpectrumSwath(OpenSwath::SpectrumAccessPtr swath_map, double RT, int nr_spectra_to_add, const double drift_lower, const double drift_upper)	OpenSwathScoring
getAddedSpectra_(OpenSwath::SpectrumAccessPtr swath_map, double RT, int nr_spectra_to_add, const double drift_lower, const double drift_upper)	OpenSwathScoring	protected
getNormalized_library_intensities_(const std::vector< TransitionType > &transitions, std::vector< double > &normalized_library_intensity)	OpenSwathScoring
im_drift_extra_pcnt_	OpenSwathScoring	private
initialize(double rt_normalization_factor, int add_up_spectra, double spacing_for_spectra_resampling, const double drift_extra, const OpenSwath_Scores_Usage &su, const std::string &spectrum_addition_method)	OpenSwathScoring
OpenSwathScoring()	OpenSwathScoring
rt_normalization_factor_	OpenSwathScoring	private
spacing_for_spectra_resampling_	OpenSwathScoring	private
spectra_addition_method_	OpenSwathScoring	private
su_	OpenSwathScoring	private
TransitionType typedef	OpenSwathScoring	private
~OpenSwathScoring()	OpenSwathScoring