ResidueModification Member List

This is the complete list of members for ResidueModification, including all inherited members.

AA_SUBSTITUTION enum value	ResidueModification
addSynonym(const String &synonym)	ResidueModification
ANYWHERE enum value	ResidueModification
ARTIFACT enum value	ResidueModification
average_mass_	ResidueModification	protected
C_TERM enum value	ResidueModification
CHEMICAL_DERIVATIVE enum value	ResidueModification
classification_	ResidueModification	protected
COTRANSLATIONAL enum value	ResidueModification
diff_average_mass_	ResidueModification	protected
diff_formula_	ResidueModification	protected
diff_mono_mass_	ResidueModification	protected
formula_	ResidueModification	protected
full_id_	ResidueModification	protected
full_name_	ResidueModification	protected
getAverageMass() const	ResidueModification
getDiffAverageMass() const	ResidueModification
getDiffFormula() const	ResidueModification
getDiffMonoMass() const	ResidueModification
getFormula() const	ResidueModification
getFullId() const	ResidueModification
getFullName() const	ResidueModification
getId() const	ResidueModification
getMonoMass() const	ResidueModification
getName() const	ResidueModification
getNeutralLossAverageMass() const	ResidueModification
getNeutralLossDiffFormula() const	ResidueModification
getNeutralLossMonoMass() const	ResidueModification
getOrigin() const	ResidueModification
getPSIMODAccession() const	ResidueModification
getSourceClassification() const	ResidueModification
getSourceClassificationName(SourceClassification classification=NUMBER_OF_SOURCE_CLASSIFICATIONS) const	ResidueModification
getSynonyms() const	ResidueModification
getTermSpecificity() const	ResidueModification
getTermSpecificityName(TermSpecificity term_spec=NUMBER_OF_TERM_SPECIFICITY) const	ResidueModification
getUniModAccession() const	ResidueModification
getUniModRecordId() const	ResidueModification
hasNeutralLoss() const	ResidueModification
HYPOTHETICAL enum value	ResidueModification
id_	ResidueModification	protected
ISOTOPIC_LABEL enum value	ResidueModification
isUserDefined() const	ResidueModification
mono_mass_	ResidueModification	protected
MULTIPLE enum value	ResidueModification
N_TERM enum value	ResidueModification
name_	ResidueModification	protected
NATURAL enum value	ResidueModification
neutral_loss_average_mass_	ResidueModification	protected
neutral_loss_diff_formula_	ResidueModification	protected
neutral_loss_mono_mass_	ResidueModification	protected
NLINKED_GLYCOSYLATION enum value	ResidueModification
NONSTANDARD_RESIDUE enum value	ResidueModification
NUMBER_OF_SOURCE_CLASSIFICATIONS enum value	ResidueModification
NUMBER_OF_TERM_SPECIFICITY enum value	ResidueModification
OLINKED_GLYCOSYLATION enum value	ResidueModification
operator!=(const ResidueModification &modification) const	ResidueModification
operator<(const ResidueModification &modification) const	ResidueModification
operator=(const ResidueModification &)=default	ResidueModification
operator=(ResidueModification &&) &=default	ResidueModification
operator==(const ResidueModification &modification) const	ResidueModification
origin_	ResidueModification	protected
OTHER enum value	ResidueModification
OTHER_GLYCOSYLATION enum value	ResidueModification
POSTTRANSLATIONAL enum value	ResidueModification
PRETRANSLATIONAL enum value	ResidueModification
PROTEIN_C_TERM enum value	ResidueModification
PROTEIN_N_TERM enum value	ResidueModification
psi_mod_accession_	ResidueModification	protected
ResidueModification()	ResidueModification
ResidueModification(const ResidueModification &)=default	ResidueModification
ResidueModification(ResidueModification &&)=default	ResidueModification
setAverageMass(double mass)	ResidueModification
setDiffAverageMass(double mass)	ResidueModification
setDiffFormula(const EmpiricalFormula &diff_formula)	ResidueModification
setDiffMonoMass(double mass)	ResidueModification
setFormula(const String &composition)	ResidueModification
setFullId(const String &full_id="")	ResidueModification
setFullName(const String &full_name)	ResidueModification
setId(const String &id)	ResidueModification
setMonoMass(double mass)	ResidueModification
setName(const String &name)	ResidueModification
setNeutralLossAverageMass(double average_mass)	ResidueModification
setNeutralLossDiffFormula(const EmpiricalFormula &loss)	ResidueModification
setNeutralLossMonoMass(double mono_mass)	ResidueModification
setOrigin(char origin)	ResidueModification
setPSIMODAccession(const String &id)	ResidueModification
setSourceClassification(const String &classification)	ResidueModification
setSourceClassification(SourceClassification classification)	ResidueModification
setSynonyms(const std::set< String > &synonyms)	ResidueModification
setTermSpecificity(TermSpecificity term_spec)	ResidueModification
setTermSpecificity(const String &name)	ResidueModification
setUniModRecordId(const Int &id)	ResidueModification
SourceClassification enum name	ResidueModification
synonyms_	ResidueModification	protected
term_spec_	ResidueModification	protected
TermSpecificity enum name	ResidueModification
unimod_record_id_	ResidueModification	protected
UNKNOWN enum value	ResidueModification
~ResidueModification()	ResidueModification	virtual