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MultiplexDeltaMassesGenerator Member List

This is the complete list of members for MultiplexDeltaMassesGenerator, including all inherited members.

check_defaults_DefaultParamHandlerprotected
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
DefaultParamHandler()DefaultParamHandlerprivate
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
delta_masses_list_MultiplexDeltaMassesGeneratorprivate
error_name_DefaultParamHandlerprotected
extractLabelSet(AASequence sequence)MultiplexDeltaMassesGenerator
fillLabelMasterList_()MultiplexDeltaMassesGeneratorprivate
generateKnockoutDeltaMasses()MultiplexDeltaMassesGenerator
getDefaults() constDefaultParamHandler
getDeltaMassesList()MultiplexDeltaMassesGenerator
getDeltaMassesList() constMultiplexDeltaMassesGenerator
getLabelLong(String label)MultiplexDeltaMassesGenerator
getLabelShort(String label)MultiplexDeltaMassesGenerator
getName() constDefaultParamHandler
getParameters() constDefaultParamHandler
getSamplesLabelsList()MultiplexDeltaMassesGenerator
getSamplesLabelsList() constMultiplexDeltaMassesGenerator
getSubsections() constDefaultParamHandler
label_delta_mass_MultiplexDeltaMassesGeneratorprivate
label_long_short_MultiplexDeltaMassesGeneratorprivate
label_master_list_MultiplexDeltaMassesGeneratorprivate
label_short_long_MultiplexDeltaMassesGeneratorprivate
labels_MultiplexDeltaMassesGeneratorprivate
labels_list_MultiplexDeltaMassesGeneratorprivate
missed_cleavages_MultiplexDeltaMassesGeneratorprivate
MultiplexDeltaMassesGenerator()MultiplexDeltaMassesGenerator
MultiplexDeltaMassesGenerator(String labels, int missed_cleavages, std::map< String, double > label_mass_shift)MultiplexDeltaMassesGenerator
operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
operator==(const DefaultParamHandler &rhs) constDefaultParamHandlervirtual
param_DefaultParamHandlerprotected
printDeltaMassesList(std::ostream &stream) constMultiplexDeltaMassesGenerator
printSamplesLabelsList(std::ostream &stream) constMultiplexDeltaMassesGenerator
samples_labels_MultiplexDeltaMassesGeneratorprivate
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
subsections_DefaultParamHandlerprotected
updateMembers_()DefaultParamHandlerprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
~DefaultParamHandler()DefaultParamHandlervirtual
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