AbsoluteQuantitationMethodFile.h

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// --------------------------------------------------------------------------
//                   OpenMS -- Open-Source Mass Spectrometry
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// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2020.
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// $Maintainer: Douglas McCloskey, Pasquale Domenico Colaianni $
// $Authors: Douglas McCloskey, Pasquale Domenico Colaianni $
// --------------------------------------------------------------------------
 
#pragma once
 
 
#include <OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.h>
#include <OpenMS/CONCEPT/LogStream.h>
#include <OpenMS/FORMAT/CsvFile.h>
#include <map>
#include <fstream>
#include <boost/regex.hpp>
 
namespace OpenMS
{
  class OPENMS_DLLAPI AbsoluteQuantitationMethodFile :
    private CsvFile
  {
public:
    AbsoluteQuantitationMethodFile() = default;
    ~AbsoluteQuantitationMethodFile() = default;
 
    void load(const String & filename, std::vector<AbsoluteQuantitationMethod> & aqm_list);
 
    void store(const String & filename, const std::vector<AbsoluteQuantitationMethod> & aqm_list);
 
protected:
    void parseLine_(
      const StringList & line,
      const std::map<String, Size> & headers,
      AbsoluteQuantitationMethod & aqm
    ) const;
 
    void setCastValue_(const String& key, const String& value, Param& params) const;
 
  };
 
} // namespace OpenMS