BaseGroupFinder.h

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// --------------------------------------------------------------------------
//                   OpenMS -- Open-Source Mass Spectrometry
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// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2020.
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// $Maintainer: Timo Sachsenberg $
// $Authors: Clemens Groepl, Marc Sturm $
// --------------------------------------------------------------------------
 
#pragma once
 
#include <OpenMS/KERNEL/ConsensusMap.h>
#include <OpenMS/CONCEPT/ProgressLogger.h>
#include <OpenMS/DATASTRUCTURES/DefaultParamHandler.h>
 
#include <utility>
#include <fstream>
 
namespace OpenMS
{
 
  class OPENMS_DLLAPI BaseGroupFinder :
    public DefaultParamHandler,
    public ProgressLogger
  {
public:
    BaseGroupFinder();
 
    ~BaseGroupFinder() override;
 
    virtual void run(const std::vector<ConsensusMap> & input, ConsensusMap & result) = 0;
 
    static void registerChildren();
 
protected:
 
    void checkIds_(const std::vector<ConsensusMap> & maps) const;
 
private:
 
    BaseGroupFinder(const BaseGroupFinder &);
 
    BaseGroupFinder & operator=(const BaseGroupFinder &);
 
  };
 
} // namespace OpenMS