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OpenMS
2.5.0
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39 #include <boost/multi_index_container.hpp>
40 #include <boost/multi_index/ordered_index.hpp>
41 #include <boost/multi_index/member.hpp>
45 namespace IdentificationDataInternal
94 typedef boost::multi_index_container<
96 boost::multi_index::indexed_by<
97 boost::multi_index::ordered_unique<boost::multi_index::member<
MoleculeType
Definition: MetaData.h:63
IteratorWrapper< ParentMolecules::iterator > ParentMoleculeRef
Definition: ParentMolecule.h:100
ParentMolecule(const String &accession, MoleculeType molecule_type=MoleculeType::PROTEIN, const String &sequence="", const String &description="", double coverage=0.0, bool is_decoy=false, const AppliedProcessingSteps &steps_and_scores=AppliedProcessingSteps())
Definition: ParentMolecule.h:65
boost::multi_index_container< ParentMolecule, boost::multi_index::indexed_by< boost::multi_index::ordered_unique< boost::multi_index::member< ParentMolecule, String, &ParentMolecule::accession > > > > ParentMolecules
Definition: ParentMolecule.h:99
A more convenient string class.
Definition: String.h:58
bool is_decoy
Definition: ParentMolecule.h:63
Definition: MetaData.h:65
AppliedProcessingSteps steps_and_scores
Definition: ScoredProcessingResult.h:46
ParentMolecule & operator+=(const ParentMolecule &other)
Definition: ParentMolecule.h:80
String accession
Definition: ParentMolecule.h:51
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:46
Wrapper that adds operator< to iterators, so they can be used as (part of) keys in maps/sets or multi...
Definition: MetaData.h:43
enum MoleculeType molecule_type
Definition: ParentMolecule.h:53
double coverage
sequence coverage as a fraction between 0 and 1
Definition: ParentMolecule.h:61
Representation of a parent molecule that is identified only indirectly (e.g. a protein).
Definition: ParentMolecule.h:49
boost::multi_index_container< AppliedProcessingStep, boost::multi_index::indexed_by< boost::multi_index::sequenced<>, boost::multi_index::ordered_unique< boost::multi_index::member< AppliedProcessingStep, boost::optional< ProcessingStepRef >, &AppliedProcessingStep::processing_step_opt > > > > AppliedProcessingSteps
Definition: AppliedProcessingStep.h:116
Base class for ID data with scores and processing steps (and meta info)
Definition: ScoredProcessingResult.h:44
String description
Definition: ParentMolecule.h:59
ScoredProcessingResult & operator+=(const ScoredProcessingResult &other)
Merge in data from another object.
Definition: ScoredProcessingResult.h:107
String sequence
Definition: ParentMolecule.h:57