RWrapper.h

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// --------------------------------------------------------------------------
//                   OpenMS -- Open-Source Mass Spectrometry
// --------------------------------------------------------------------------
// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2020.
//
// This software is released under a three-clause BSD license:
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//  * Redistributions in binary form must reproduce the above copyright
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// $Maintainer: Chris Bielow $
// $Authors: Chris Bielow $
// --------------------------------------------------------------------------
 
#pragma once
 
#include <OpenMS/config.h>
 
#include <QString>
 
class QStringList;
 
namespace OpenMS
{
 
  class String;
 
  class OPENMS_DLLAPI RWrapper
  {
public:
 
 
    static String findScript(const String& script_file, bool verbose = true);
 
    static bool findR(const QString& executable = QString("Rscript"), bool verbose = true);
 
 
    static bool runScript(const String& script_file, const QStringList& cmd_args, const QString& executable = QString("Rscript"), bool find_R = false, bool verbose = true);
 
  };
 
}