OpenMS  2.5.0
TransitionHelper.h
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34 
35 #pragma once
36 
37 #include <OpenMS/OPENSWATHALGO/OpenSwathAlgoConfig.h>
38 #include <map>
39 #include <vector>
40 #include <string>
41 
42 namespace OpenSwath
43 {
44 
45  struct LightCompound;
46  struct LightTargetedExperiment;
47  struct LightTransition;
48 
49  struct OPENSWATHALGO_DLLAPI TransitionHelper
50  {
51 
52  static void convert(LightTargetedExperiment& lte,
53  std::map<std::string,
54  std::vector<LightTransition> >& transmap);
55 
56 
57  // TODO : remove and explain German comments
58  // spiegel
59  static bool findPeptide(const LightTargetedExperiment& lte,
60  const std::string& peptideRef,
61  LightCompound& pep);
62  };
63 
64 } //end namespace
65 
OpenSwath
Definition: MRMScoring.h:49
OpenMS::detail::convert
T convert(const String &s)
Definition: ListUtils.h:244
OpenSwath::LightTargetedExperiment
Definition: TransitionExperiment.h:207
OpenSwath::LightCompound
Definition: TransitionExperiment.h:149
OpenSwath::TransitionHelper
Definition: TransitionHelper.h:49