ConsensusMapNormalizerAlgorithmThreshold.h

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// --------------------------------------------------------------------------
//                   OpenMS -- Open-Source Mass Spectrometry
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// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2020.
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// This software is released under a three-clause BSD license:
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// $Maintainer: Lars Nilse $
// $Authors: Hendrik Brauer, Oliver Kohlbacher, Johannes Junker $
// --------------------------------------------------------------------------
 
#pragma once
 
#include <OpenMS/KERNEL/ConsensusMap.h>
 
namespace OpenMS
{
 
  class OPENMS_DLLAPI ConsensusMapNormalizerAlgorithmThreshold
  {
private:
    ConsensusMapNormalizerAlgorithmThreshold(const ConsensusMapNormalizerAlgorithmThreshold & copyin);
 
    ConsensusMapNormalizerAlgorithmThreshold & operator=(const ConsensusMapNormalizerAlgorithmThreshold & rhs);
 
public:
    ConsensusMapNormalizerAlgorithmThreshold();
 
    virtual ~ConsensusMapNormalizerAlgorithmThreshold();
 
    static std::vector<double> computeCorrelation(const ConsensusMap & map, const double & ratio_threshold, const String & acc_filter, const String & desc_filter);
 
    static void normalizeMaps(ConsensusMap & map, const std::vector<double> & ratios);
  };
 
} // namespace OpenMS