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METADATA
Digestion.h
Go to the documentation of this file.
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// --------------------------------------------------------------------------
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// OpenMS -- Open-Source Mass Spectrometry
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// --------------------------------------------------------------------------
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// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
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// ETH Zurich, and Freie Universitaet Berlin 2002-2020.
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//
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// This software is released under a three-clause BSD license:
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// * Redistributions of source code must retain the above copyright
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// notice, this list of conditions and the following disclaimer.
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// * Redistributions in binary form must reproduce the above copyright
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// notice, this list of conditions and the following disclaimer in the
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// documentation and/or other materials provided with the distribution.
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// * Neither the name of any author or any participating institution
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// may be used to endorse or promote products derived from this software
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// without specific prior written permission.
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// For a full list of authors, refer to the file AUTHORS.
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// --------------------------------------------------------------------------
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// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
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// ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
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// INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
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// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
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// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
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// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
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// WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
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// OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
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// ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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//
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// --------------------------------------------------------------------------
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// $Maintainer: Timo Sachsenberg $
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// $Authors: Marc Sturm $
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// --------------------------------------------------------------------------
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#pragma once
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#include <
OpenMS/DATASTRUCTURES/String.h
>
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#include <
OpenMS/METADATA/SampleTreatment.h
>
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namespace
OpenMS
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{
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class
OPENMS_DLLAPI
Digestion
:
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public
SampleTreatment
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{
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public
:
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Digestion
();
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Digestion
(
const
Digestion
&) =
default
;
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Digestion
(
Digestion
&&) =
default
;
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~
Digestion
()
override
;
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Digestion
& operator=(
const
Digestion
&) =
default
;
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Digestion
& operator=(
Digestion
&&) & =
default
;
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bool
operator==
(
const
SampleTreatment
& rhs)
const override
;
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SampleTreatment
* clone()
const override
;
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const
String
& getEnzyme()
const
;
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void
setEnzyme(
const
String
& enzyme);
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double
getDigestionTime()
const
;
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void
setDigestionTime(
double
digestion_time);
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double
getTemperature()
const
;
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void
setTemperature(
double
temperature);
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double
getPh()
const
;
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void
setPh(
double
ph);
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protected
:
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String
enzyme_
;
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double
digestion_time_
;
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double
temperature_
;
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double
ph_
;
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};
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}
// namespace OpenMS
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OpenMS::Digestion::digestion_time_
double digestion_time_
Definition:
Digestion.h:100
OpenMS::String
A more convenient string class.
Definition:
String.h:59
OpenMS::Digestion::enzyme_
String enzyme_
Definition:
Digestion.h:99
OpenMS
Main OpenMS namespace.
Definition:
FeatureDeconvolution.h:46
OpenMS::SampleTreatment
Base class for sample treatments (Digestion, Modification, Tagging, ...)
Definition:
SampleTreatment.h:51
OpenMS::Digestion::temperature_
double temperature_
Definition:
Digestion.h:101
SampleTreatment.h
OpenMS::Digestion::ph_
double ph_
Definition:
Digestion.h:102
OpenMS::Internal::operator==
bool operator==(const IDBoostGraph::ProteinGroup &lhs, const IDBoostGraph::ProteinGroup &rhs)
String.h
OpenMS::Digestion
Meta information about digestion of a sample.
Definition:
Digestion.h:49
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