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OpenMS
FORMAT
VALIDATORS
MzQuantMLValidator.h
Go to the documentation of this file.
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// --------------------------------------------------------------------------
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// OpenMS -- Open-Source Mass Spectrometry
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// --------------------------------------------------------------------------
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// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
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// ETH Zurich, and Freie Universitaet Berlin 2002-2020.
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//
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// This software is released under a three-clause BSD license:
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// * Redistributions of source code must retain the above copyright
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// notice, this list of conditions and the following disclaimer.
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// * Redistributions in binary form must reproduce the above copyright
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// notice, this list of conditions and the following disclaimer in the
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// documentation and/or other materials provided with the distribution.
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// * Neither the name of any author or any participating institution
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// may be used to endorse or promote products derived from this software
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// without specific prior written permission.
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// For a full list of authors, refer to the file AUTHORS.
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// --------------------------------------------------------------------------
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// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
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// ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
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// INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
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// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
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// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
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// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
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// WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
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// OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
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// ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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//
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// --------------------------------------------------------------------------
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// $Maintainer: Mathias Walzer $
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// $Authors: Mathias Walzer $
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// --------------------------------------------------------------------------
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#pragma once
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#include <
OpenMS/FORMAT/VALIDATORS/SemanticValidator.h
>
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#include <
OpenMS/FORMAT/ControlledVocabulary.h
>
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namespace
OpenMS
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{
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class
ControlledVocabulary;
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namespace
Internal
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{
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class
OPENMS_DLLAPI
MzQuantMLValidator
:
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public
SemanticValidator
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{
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public
:
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MzQuantMLValidator
(
const
CVMappings
& mapping,
const
ControlledVocabulary
& cv);
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~
MzQuantMLValidator
()
override
;
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protected
:
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Map<String, std::vector<CVTerm>
>
param_groups_
;
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private
:
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MzQuantMLValidator
();
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MzQuantMLValidator
(
const
MzQuantMLValidator
& rhs);
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MzQuantMLValidator
& operator=(
const
MzQuantMLValidator
& rhs);
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};
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}
// namespace Internal
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}
// namespace OpenMS
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OpenMS::ControlledVocabulary
Representation of a controlled vocabulary.
Definition:
ControlledVocabulary.h:54
ControlledVocabulary.h
OpenMS::CVMappings
Representation of controlled vocabulary mapping rules (for PSI formats)
Definition:
CVMappings.h:56
OpenMS::Internal::MzQuantMLValidator::param_groups_
Map< String, std::vector< CVTerm > > param_groups_
CV terms which can have a value (term => value type) - see MzMLValidator impl.
Definition:
MzQuantMLValidator.h:68
OpenMS
Main OpenMS namespace.
Definition:
FeatureDeconvolution.h:46
OpenMS::Internal::SemanticValidator
Semantically validates XML files using CVMappings and a ControlledVocabulary.
Definition:
SemanticValidator.h:55
SemanticValidator.h
OpenMS::Internal::MzQuantMLValidator
Semantically validates MzQuantML files.
Definition:
MzQuantMLValidator.h:51
OpenMS::Map
Map class based on the STL map (containing several convenience functions)
Definition:
Map.h:50
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