SpectrumAccessTransforming.h

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//                   OpenMS -- Open-Source Mass Spectrometry
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// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2020.
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// $Maintainer: Hannes Roest $
// $Authors: Hannes Roest $
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#pragma once
 
#include <OpenMS/config.h>
#include <OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h>
 
namespace OpenMS
{
 
  class OPENMS_DLLAPI SpectrumAccessTransforming :
    public OpenSwath::ISpectrumAccess
  {
public:
 
    explicit SpectrumAccessTransforming(OpenSwath::SpectrumAccessPtr sptr);
        
    ~SpectrumAccessTransforming() override = 0;
 
    boost::shared_ptr<ISpectrumAccess> lightClone() const override = 0;
 
    OpenSwath::SpectrumPtr getSpectrumById(int id) override;
 
    OpenSwath::SpectrumMeta getSpectrumMetaById(int id) const override;
 
    std::vector<std::size_t> getSpectraByRT(double RT, double deltaRT) const override;
 
    size_t getNrSpectra() const override;
 
    OpenSwath::ChromatogramPtr getChromatogramById(int id) override;
 
    size_t getNrChromatograms() const override;
 
    std::string getChromatogramNativeID(int id) const override;
 
protected:
    OpenSwath::SpectrumAccessPtr sptr_;
 
  };
 
}