OpenMS
2.6.0
Main Page
Related Pages
Modules
Namespaces
Classes
Files
File List
File Members
•
All
Classes
Namespaces
Files
Functions
Variables
Typedefs
Enumerations
Enumerator
Properties
Friends
Macros
Modules
Pages
OpenMS
COMPARISON
SPECTRA
SteinScottImproveScore.h
Go to the documentation of this file.
1
// --------------------------------------------------------------------------
2
// OpenMS -- Open-Source Mass Spectrometry
3
// --------------------------------------------------------------------------
4
// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
5
// ETH Zurich, and Freie Universitaet Berlin 2002-2020.
6
//
7
// This software is released under a three-clause BSD license:
8
// * Redistributions of source code must retain the above copyright
9
// notice, this list of conditions and the following disclaimer.
10
// * Redistributions in binary form must reproduce the above copyright
11
// notice, this list of conditions and the following disclaimer in the
12
// documentation and/or other materials provided with the distribution.
13
// * Neither the name of any author or any participating institution
14
// may be used to endorse or promote products derived from this software
15
// without specific prior written permission.
16
// For a full list of authors, refer to the file AUTHORS.
17
// --------------------------------------------------------------------------
18
// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
19
// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
20
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
21
// ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
22
// INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
23
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
24
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
25
// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
26
// WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
27
// OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
28
// ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
29
//
30
// --------------------------------------------------------------------------
31
// $Maintainer: Timo Sachsenberg $
32
// $Authors: Vipul Patel $
33
// --------------------------------------------------------------------------
34
//
35
#pragma once
36
37
#include <
OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h
>
38
#include <cmath>
39
40
namespace
OpenMS
41
{
74
class
OPENMS_DLLAPI
SteinScottImproveScore
:
75
public
PeakSpectrumCompareFunctor
76
{
77
78
public
:
80
SteinScottImproveScore
();
82
SteinScottImproveScore
(
const
SteinScottImproveScore
& source);
84
~
SteinScottImproveScore
()
override
;
86
SteinScottImproveScore
& operator=(
const
SteinScottImproveScore
& source);
92
double
operator()(
const
PeakSpectrum
& spec1,
const
PeakSpectrum
& spec2)
const override
;
98
double
operator()(
const
PeakSpectrum
& spec)
const override
;
99
static
PeakSpectrumCompareFunctor
*
create
()
100
{
101
return
new
SteinScottImproveScore
();
102
}
103
104
static
const
String
getProductName
()
105
{
106
return
"SteinScottImproveScore"
;
107
}
108
109
};
110
}
111
112
OpenMS::SteinScottImproveScore::create
static PeakSpectrumCompareFunctor * create()
Definition:
SteinScottImproveScore.h:99
OpenMS::SteinScottImproveScore::getProductName
static const String getProductName()
Definition:
SteinScottImproveScore.h:104
OpenMS::String
A more convenient string class.
Definition:
String.h:59
OpenMS::PeakSpectrumCompareFunctor
Base class for compare functors of spectra, that return a similarity value for two spectra.
Definition:
PeakSpectrumCompareFunctor.h:52
OpenMS
Main OpenMS namespace.
Definition:
FeatureDeconvolution.h:46
PeakSpectrumCompareFunctor.h
OpenMS::SteinScottImproveScore
Similarity score based of Stein & Scott.
Definition:
SteinScottImproveScore.h:74
OpenMS::MSSpectrum
The representation of a 1D spectrum.
Definition:
MSSpectrum.h:67
Generated on Wed Sep 30 2020 13:52:59 for OpenMS by
1.8.16