OpenMS  2.7.0
All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Properties Friends Macros Modules Pages
ConsensusMapMergerAlgorithm Member List

This is the complete list of members for ConsensusMapMergerAlgorithm, including all inherited members.

accessionEqual_(const ProteinHit &p1, const ProteinHit &p2)ConsensusMapMergerAlgorithminlineprivatestatic
accessionHash_(const ProteinHit &p)ConsensusMapMergerAlgorithminlineprivatestatic
check_defaults_DefaultParamHandlerprotected
checkOldRunConsistency_(const std::vector< ProteinIdentification > &protRuns, const String &experiment_type) constConsensusMapMergerAlgorithmprivate
checkOldRunConsistency_(const std::vector< ProteinIdentification > &protRuns, const ProteinIdentification &ref, const String &experiment_type) constConsensusMapMergerAlgorithmprivate
CMD enum valueProgressLogger
ConsensusMapMergerAlgorithm()ConsensusMapMergerAlgorithm
current_logger_ProgressLoggermutableprotected
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
DefaultParamHandler()DefaultParamHandlerprivate
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
endProgress() constProgressLogger
equal_type typedefConsensusMapMergerAlgorithmprivate
error_name_DefaultParamHandlerprotected
getDefaults() constDefaultParamHandler
getLogType() constProgressLogger
getName() constDefaultParamHandler
getParameters() constDefaultParamHandler
getSubsections() constDefaultParamHandler
GUI enum valueProgressLogger
hash_type typedefConsensusMapMergerAlgorithmprivate
last_invoke_ProgressLoggermutableprotected
LogType enum nameProgressLogger
logTypeToFactoryName_(LogType type)ProgressLoggerprotectedstatic
mergeAllIDRuns(ConsensusMap &cmap) constConsensusMapMergerAlgorithm
mergeProteinIDRuns(ConsensusMap &cmap, const std::map< unsigned, unsigned > &mapIdx_to_new_protIDRun) constConsensusMapMergerAlgorithm
mergeProteinsAcrossFractionsAndReplicates(ConsensusMap &cmap, const ExperimentalDesign &exp_design) constConsensusMapMergerAlgorithm
nextProgress() constProgressLogger
NONE enum valueProgressLogger
OpenMS::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
OpenMS::ProgressLogger::operator=(const ProgressLogger &other)ProgressLogger
operator==(const DefaultParamHandler &rhs) constDefaultParamHandlervirtual
param_DefaultParamHandlerprotected
ProgressLogger()ProgressLogger
ProgressLogger(const ProgressLogger &other)ProgressLogger
recursion_depth_ProgressLoggerprotectedstatic
setLogType(LogType type) constProgressLogger
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
setProgress(SignedSize value) constProgressLogger
startProgress(SignedSize begin, SignedSize end, const String &label) constProgressLogger
subsections_DefaultParamHandlerprotected
type_ProgressLoggermutableprotected
updateMembers_()DefaultParamHandlerprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &prefix="")DefaultParamHandlerstatic
~DefaultParamHandler()DefaultParamHandlervirtual
~ProgressLogger()ProgressLoggervirtual