OpenMS  2.7.0
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MzMLSqliteHandler Member List

This is the complete list of members for MzMLSqliteHandler, including all inherited members.

chrom_id_MzMLSqliteHandlerprotected
createIndices_()MzMLSqliteHandlerprotected
createTables()MzMLSqliteHandler
filename_MzMLSqliteHandlerprotected
getNrChromatograms() constMzMLSqliteHandler
getNrSpectra() constMzMLSqliteHandler
getRunID() constMzMLSqliteHandler
getSpectraIndicesbyRT(double RT, double deltaRT, const std::vector< int > &indices) constMzMLSqliteHandler
linear_abs_mass_acc_MzMLSqliteHandlerprotected
MzMLSqliteHandler(const String &filename, const UInt64 run_id)MzMLSqliteHandler
populateChromatogramsWithData_(sqlite3 *db, std::vector< MSChromatogram > &chromatograms) constMzMLSqliteHandlerprotected
populateChromatogramsWithData_(sqlite3 *db, std::vector< MSChromatogram > &chromatograms, const std::vector< int > &indices) constMzMLSqliteHandlerprotected
populateSpectraWithData_(sqlite3 *db, std::vector< MSSpectrum > &spectra) constMzMLSqliteHandlerprotected
populateSpectraWithData_(sqlite3 *db, std::vector< MSSpectrum > &spectra, const std::vector< int > &indices) constMzMLSqliteHandlerprotected
prepareChroms_(sqlite3 *db, std::vector< MSChromatogram > &chromatograms, const std::vector< int > &indices={}) constMzMLSqliteHandlerprotected
prepareSpectra_(sqlite3 *db, std::vector< MSSpectrum > &spectra, const std::vector< int > &indices={}) constMzMLSqliteHandlerprotected
readChromatograms(std::vector< MSChromatogram > &exp, const std::vector< int > &indices, bool meta_only=false) constMzMLSqliteHandler
readExperiment(MSExperiment &exp, bool meta_only=false) constMzMLSqliteHandler
readSpectra(std::vector< MSSpectrum > &exp, const std::vector< int > &indices, bool meta_only=false) constMzMLSqliteHandler
run_id_MzMLSqliteHandlerprotected
setConfig(bool write_full_meta, bool use_lossy_compression, double linear_abs_mass_acc, int sql_batch_size=500)MzMLSqliteHandlerinline
spec_id_MzMLSqliteHandlerprotected
sql_batch_size_MzMLSqliteHandlerprotected
use_lossy_compression_MzMLSqliteHandlerprotected
write_full_meta_MzMLSqliteHandlerprotected
writeChromatograms(const std::vector< MSChromatogram > &chroms)MzMLSqliteHandler
writeExperiment(const MSExperiment &exp)MzMLSqliteHandler
writeRunLevelInformation(const MSExperiment &exp, bool write_full_meta)MzMLSqliteHandler
writeSpectra(const std::vector< MSSpectrum > &spectra)MzMLSqliteHandler