MzMLSqliteHandler Member List

This is the complete list of members for MzMLSqliteHandler, including all inherited members.

chrom_id_	MzMLSqliteHandler	protected
createIndices_()	MzMLSqliteHandler	protected
createTables()	MzMLSqliteHandler
filename_	MzMLSqliteHandler	protected
getNrChromatograms() const	MzMLSqliteHandler
getNrSpectra() const	MzMLSqliteHandler
getRunID() const	MzMLSqliteHandler
getSpectraIndicesbyRT(double RT, double deltaRT, const std::vector< int > &indices) const	MzMLSqliteHandler
linear_abs_mass_acc_	MzMLSqliteHandler	protected
MzMLSqliteHandler(const String &filename, const UInt64 run_id)	MzMLSqliteHandler
populateChromatogramsWithData_(sqlite3 *db, std::vector< MSChromatogram > &chromatograms) const	MzMLSqliteHandler	protected
populateChromatogramsWithData_(sqlite3 *db, std::vector< MSChromatogram > &chromatograms, const std::vector< int > &indices) const	MzMLSqliteHandler	protected
populateSpectraWithData_(sqlite3 *db, std::vector< MSSpectrum > &spectra) const	MzMLSqliteHandler	protected
populateSpectraWithData_(sqlite3 *db, std::vector< MSSpectrum > &spectra, const std::vector< int > &indices) const	MzMLSqliteHandler	protected
prepareChroms_(sqlite3 *db, std::vector< MSChromatogram > &chromatograms, const std::vector< int > &indices={}) const	MzMLSqliteHandler	protected
prepareSpectra_(sqlite3 *db, std::vector< MSSpectrum > &spectra, const std::vector< int > &indices={}) const	MzMLSqliteHandler	protected
readChromatograms(std::vector< MSChromatogram > &exp, const std::vector< int > &indices, bool meta_only=false) const	MzMLSqliteHandler
readExperiment(MSExperiment &exp, bool meta_only=false) const	MzMLSqliteHandler
readSpectra(std::vector< MSSpectrum > &exp, const std::vector< int > &indices, bool meta_only=false) const	MzMLSqliteHandler
run_id_	MzMLSqliteHandler	protected
setConfig(bool write_full_meta, bool use_lossy_compression, double linear_abs_mass_acc, int sql_batch_size=500)	MzMLSqliteHandler	inline
spec_id_	MzMLSqliteHandler	protected
sql_batch_size_	MzMLSqliteHandler	protected
use_lossy_compression_	MzMLSqliteHandler	protected
write_full_meta_	MzMLSqliteHandler	protected
writeChromatograms(const std::vector< MSChromatogram > &chroms)	MzMLSqliteHandler
writeExperiment(const MSExperiment &exp)	MzMLSqliteHandler
writeRunLevelInformation(const MSExperiment &exp, bool write_full_meta)	MzMLSqliteHandler
writeSpectra(const std::vector< MSSpectrum > &spectra)	MzMLSqliteHandler