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O18Labeler Member List

This is the complete list of members for O18Labeler, including all inherited members.

addModificationToPeptideHit_(Feature &feature, const String &modification) constO18Labelerprotected
BaseLabeler()BaseLabeler
channel_description_BaseLabelerprotected
check_defaults_DefaultParamHandlerprotected
consensus_BaseLabelerprotected
create()O18Labelerinlinestatic
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
DefaultParamHandler()DefaultParamHandlerprivate
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
error_name_DefaultParamHandlerprotected
getChannelIntensityName(const Size channel_index) constBaseLabeler
getConsensus()BaseLabeler
getDefaultParameters() constBaseLabelervirtual
getDefaults() constDefaultParamHandler
getDescription() constBaseLabeler
getName() constDefaultParamHandler
getParameters() constDefaultParamHandler
getProductName()O18Labelerinlinestatic
getSubsections() constDefaultParamHandler
HEAVY_CHANNEL_ID_O18Labelerprivatestatic
LIGHT_CHANNEL_ID_O18Labelerprivatestatic
MEDIUM_CHANNEL_ID_O18Labelerprivatestatic
mergeFeatures_(Feature &labeled_channel_feature, const AASequence &unmodified_sequence, std::map< AASequence, Feature > &unlabeled_features_index) constO18Labelerprotected
mergeProteinAccessions_(Feature &target, const Feature &source) constBaseLabelerprotected
mergeProteinIdentificationsMaps_(const SimTypes::FeatureMapSimVector &maps)BaseLabelerprotected
O18Labeler()O18Labeler
operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
operator==(const DefaultParamHandler &rhs) constDefaultParamHandlervirtual
param_DefaultParamHandlerprotected
postDetectabilityHook(SimTypes::FeatureMapSimVector &) overrideO18Labelervirtual
postDigestHook(SimTypes::FeatureMapSimVector &) overrideO18Labelervirtual
postIonizationHook(SimTypes::FeatureMapSimVector &) overrideO18Labelervirtual
postRawMSHook(SimTypes::FeatureMapSimVector &) overrideO18Labelervirtual
postRawTandemMSHook(SimTypes::FeatureMapSimVector &, SimTypes::MSSimExperiment &) overrideO18Labelervirtual
postRTHook(SimTypes::FeatureMapSimVector &) overrideO18Labelervirtual
preCheck(Param &param) const overrideO18Labelervirtual
recomputeConsensus_(const SimTypes::FeatureMapSim &simulated_features)BaseLabelerprotected
registerChildren()BaseLabelerstatic
rng_BaseLabelerprotected
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
setRnd(SimTypes::MutableSimRandomNumberGeneratorPtr rng)BaseLabelervirtual
setUpHook(SimTypes::FeatureMapSimVector &) overrideO18Labelervirtual
subsections_DefaultParamHandlerprotected
updateMembers_()DefaultParamHandlerprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &prefix="")DefaultParamHandlerstatic
~BaseLabeler() overrideBaseLabeler
~DefaultParamHandler()DefaultParamHandlervirtual
~O18Labeler() overrideO18Labeler
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