Abstract base class describing an isobaric quantitation method in terms of the used channels and an i...
Definition: IsobaricQuantitationMethod.h:57
std::vector< IsobaricChannelInformation > IsobaricChannelList
Definition: IsobaricQuantitationMethod.h:110
iTRAQ 4 plex quantitation to be used with the IsobaricQuantitation.
Definition: ItraqFourPlexQuantitationMethod.h:48
const IsobaricChannelList & getChannelInformation() const override
Returns information on the different channels used by the quantitation method.
~ItraqFourPlexQuantitationMethod() override
d'tor
ItraqFourPlexQuantitationMethod & operator=(const ItraqFourPlexQuantitationMethod &rhs)
Assignment operator.
Size reference_channel_
The reference channel for this experiment.
Definition: ItraqFourPlexQuantitationMethod.h:85
const String & getMethodName() const override
Methods to implement from IsobaricQuantitationMethod.
Size getReferenceChannel() const override
Returns the index of the reference channel in the IsobaricChannelList (see IsobaricQuantitationMethod...
void setDefaultParams_()
implemented for DefaultParamHandler
Size getNumberOfChannels() const override
Gives the number of channels available for this quantitation method.
ItraqFourPlexQuantitationMethod(const ItraqFourPlexQuantitationMethod &other)
Copy c'tor.
void updateMembers_() override
implemented for DefaultParamHandler
ItraqFourPlexQuantitationMethod()
Default c'tor.
static const String name_
The name of the quantitation method.
Definition: ItraqFourPlexQuantitationMethod.h:82
Matrix< double > getIsotopeCorrectionMatrix() const override
Returns an isotope correction matrix suitable for the given quantitation method.
IsobaricChannelList channels_
the actual information on the different itraq4plex channels.
Definition: ItraqFourPlexQuantitationMethod.h:79
A more convenient string class.
Definition: String.h:60
size_t Size
Size type e.g. used as variable which can hold result of size()
Definition: Types.h:127
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47