OpenMS  2.8.0
TICFilter.h
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31 // $Maintainer: Timo Sachsenberg $
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34 //
35 #pragma once
36 
38 
39 namespace OpenMS
40 {
48  class OPENMS_DLLAPI TICFilter :
49  public FilterFunctor
50  {
51 public:
52 
53  // @name Constructors and Destructors
54  // @{
57 
59  TICFilter(const TICFilter & source);
60 
62  ~TICFilter() override;
63  // @}
64 
65  // @name Operators
66  // @{
68  TICFilter & operator=(const TICFilter & source);
69  // @}
70 
71  // @name Accessors
72  // @{
74  static FilterFunctor * create() { return new TICFilter(); }
75 
77  template <typename SpectrumType>
78  double apply(SpectrumType & spectrum)
79  {
80  typedef typename SpectrumType::ConstIterator ConstIterator;
81  double TIC = 0;
82  //double window = (double)param_.getValue("window");
83 
84  for (ConstIterator it = spectrum.begin(); it != spectrum.end(); ++it)
85  {
86  TIC += it->getIntensity();
87  }
88  return TIC;
89  }
90 
92  static const String getProductName()
93  {
94  return "TICFilter";
95  }
96 
97  // @}
98 
99  };
100 }
A FilterFunctor extracts some spectrum characteristics for quality assessment.
Definition: FilterFunctor.h:46
The representation of a 1D spectrum.
Definition: MSSpectrum.h:70
ContainerType::const_iterator ConstIterator
Non-mutable iterator.
Definition: MSSpectrum.h:130
A more convenient string class.
Definition: String.h:60
TICFilter calculates TIC.
Definition: TICFilter.h:50
TICFilter(const TICFilter &source)
copy constructor
~TICFilter() override
destructor
static FilterFunctor * create()
Definition: TICFilter.h:74
double apply(SpectrumType &spectrum)
Definition: TICFilter.h:78
TICFilter & operator=(const TICFilter &source)
assignment operator
TICFilter()
standard constructor
static const String getProductName()
Definition: TICFilter.h:92
Definition: TIC.h:56
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47