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ANALYSIS
MAPMATCHING
TransformationModelLowess.h
Go to the documentation of this file.
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// --------------------------------------------------------------------------
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// OpenMS -- Open-Source Mass Spectrometry
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// --------------------------------------------------------------------------
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// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
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// ETH Zurich, and Freie Universitaet Berlin 2002-2021.
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//
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// This software is released under a three-clause BSD license:
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// * Redistributions of source code must retain the above copyright
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// notice, this list of conditions and the following disclaimer.
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// * Redistributions in binary form must reproduce the above copyright
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// notice, this list of conditions and the following disclaimer in the
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// documentation and/or other materials provided with the distribution.
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// * Neither the name of any author or any participating institution
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// may be used to endorse or promote products derived from this software
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// without specific prior written permission.
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// For a full list of authors, refer to the file AUTHORS.
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// --------------------------------------------------------------------------
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// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
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// ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
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// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
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// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
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// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
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// WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
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// OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
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// ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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//
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// --------------------------------------------------------------------------
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// $Maintainer: Hannes Roest $
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// $Authors: Hannes Roest $
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// --------------------------------------------------------------------------
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#pragma once
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#include <OpenMS/config.h>
// is this needed?
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#include <
OpenMS/ANALYSIS/MAPMATCHING/TransformationModel.h
>
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#include <
OpenMS/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.h
>
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namespace
OpenMS
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{
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class
OPENMS_DLLAPI
TransformationModelLowess
:
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public
TransformationModel
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{
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public
:
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TransformationModelLowess
(
const
DataPoints
& data,
const
Param
& params);
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~TransformationModelLowess
()
override
;
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double
evaluate
(
double
value)
const override
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{
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return
model_->evaluate(value);
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}
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using
TransformationModel::getParameters
;
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static
void
getDefaultParameters
(
Param
& params);
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protected
:
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TransformationModelInterpolated
*
model_
;
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};
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}
// namespace
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TransformationModelInterpolated.h
TransformationModel.h
OpenMS::Param
Management and storage of parameters / INI files.
Definition:
Param.h:70
OpenMS::TransformationModelInterpolated
Interpolation model for transformations.
Definition:
TransformationModelInterpolated.h:71
OpenMS::TransformationModelLowess
Lowess (non-linear) model for transformations.
Definition:
TransformationModelLowess.h:51
OpenMS::TransformationModelLowess::TransformationModelLowess
TransformationModelLowess(const DataPoints &data, const Param ¶ms)
Constructor.
OpenMS::TransformationModelLowess::getDefaultParameters
static void getDefaultParameters(Param ¶ms)
Gets the default parameters.
OpenMS::TransformationModelLowess::~TransformationModelLowess
~TransformationModelLowess() override
Destructor.
OpenMS::TransformationModelLowess::evaluate
double evaluate(double value) const override
Evaluates the model at the given value.
Definition:
TransformationModelLowess.h:64
OpenMS::TransformationModelLowess::model_
TransformationModelInterpolated * model_
Pointer to the underlying interpolation.
Definition:
TransformationModelLowess.h:76
OpenMS::TransformationModel
Base class for transformation models.
Definition:
TransformationModel.h:55
OpenMS::TransformationModel::getParameters
const Param & getParameters() const
Gets the (actual) parameters.
OpenMS::TransformationModel::DataPoints
std::vector< DataPoint > DataPoints
Vector of coordinate pairs.
Definition:
TransformationModel.h:91
OpenMS
Main OpenMS namespace.
Definition:
FeatureDeconvolution.h:47
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