OpenMS  2.8.0
DigestionEnzymeProtein Member List

This is the complete list of members for DigestionEnzymeProtein, including all inherited members.

addSynonym(const String &synonym)DigestionEnzyme
c_term_gain_DigestionEnzymeProteinprotected
cleavage_regex_DigestionEnzymeprotected
comet_id_DigestionEnzymeProteinprotected
crux_id_DigestionEnzymeProteinprotected
DigestionEnzyme(const DigestionEnzyme &)=defaultDigestionEnzyme
DigestionEnzyme(DigestionEnzyme &&)=defaultDigestionEnzyme
DigestionEnzyme(const String &name, const String &cleavage_regex, const std::set< String > &synonyms=std::set< String >(), String regex_description="")DigestionEnzymeexplicit
DigestionEnzyme(const String &name, String cut_before, const String &nocut_after="", String sense="C", const std::set< String > &synonyms=std::set< String >(), String regex_description="")DigestionEnzymeexplicit
DigestionEnzyme()DigestionEnzymeprotected
DigestionEnzymeProtein()DigestionEnzymeProtein
DigestionEnzymeProtein(const DigestionEnzyme &d)DigestionEnzymeProteinexplicit
DigestionEnzymeProtein(const DigestionEnzymeProtein &)=defaultDigestionEnzymeProtein
DigestionEnzymeProtein(DigestionEnzymeProtein &&)=defaultDigestionEnzymeProtein
DigestionEnzymeProtein(const String &name, const String &cleavage_regex, const std::set< String > &synonyms=std::set< String >(), String regex_description="", EmpiricalFormula n_term_gain=EmpiricalFormula("H"), EmpiricalFormula c_term_gain=EmpiricalFormula("OH"), String psi_id="", String xtandem_id="", Int comet_id=-1, String crux_id="", Int msgf_id=-1, Int omssa_id=-1)DigestionEnzymeProteinexplicit
getCometID() constDigestionEnzymeProtein
getCruxID() constDigestionEnzymeProtein
getCTermGain() constDigestionEnzymeProtein
getMSGFID() constDigestionEnzymeProtein
getName() constDigestionEnzyme
getNTermGain() constDigestionEnzymeProtein
getOMSSAID() constDigestionEnzymeProtein
getPSIID() constDigestionEnzymeProtein
getRegEx() constDigestionEnzyme
getRegExDescription() constDigestionEnzyme
getSynonyms() constDigestionEnzyme
getXTandemID() constDigestionEnzymeProtein
msgf_id_DigestionEnzymeProteinprotected
n_term_gain_DigestionEnzymeProteinprotected
name_DigestionEnzymeprotected
omssa_id_DigestionEnzymeProteinprotected
operator!=(const DigestionEnzymeProtein &enzyme) constDigestionEnzymeProtein
operator!=(const String &cleavage_regex) constDigestionEnzymeProtein
OpenMS::DigestionEnzyme::operator!=(const DigestionEnzyme &enzyme) constDigestionEnzyme
operator<(const DigestionEnzymeProtein &enzyme) constDigestionEnzymeProtein
OpenMS::DigestionEnzyme::operator<(const DigestionEnzyme &enzyme) constDigestionEnzyme
operator<<(std::ostream &os, const DigestionEnzymeProtein &enzyme)DigestionEnzymeProteinfriend
operator=(const DigestionEnzymeProtein &)=defaultDigestionEnzymeProtein
operator=(DigestionEnzymeProtein &&) &=defaultDigestionEnzymeProtein
OpenMS::DigestionEnzyme::operator=(const DigestionEnzyme &)=defaultDigestionEnzyme
OpenMS::DigestionEnzyme::operator=(DigestionEnzyme &&) &=defaultDigestionEnzyme
operator==(const DigestionEnzymeProtein &enzyme) constDigestionEnzymeProtein
operator==(const String &cleavage_regex) constDigestionEnzymeProtein
OpenMS::DigestionEnzyme::operator==(const DigestionEnzyme &enzyme) constDigestionEnzyme
psi_id_DigestionEnzymeProteinprotected
regex_description_DigestionEnzymeprotected
setCometID(Int value)DigestionEnzymeProtein
setCruxID(const String &value)DigestionEnzymeProtein
setCTermGain(const EmpiricalFormula &value)DigestionEnzymeProtein
setMSGFID(Int value)DigestionEnzymeProtein
setName(const String &name)DigestionEnzyme
setNTermGain(const EmpiricalFormula &value)DigestionEnzymeProtein
setOMSSAID(Int value)DigestionEnzymeProtein
setPSIID(const String &value)DigestionEnzymeProtein
setRegEx(const String &cleavage_regex)DigestionEnzyme
setRegExDescription(const String &value)DigestionEnzyme
setSynonyms(const std::set< String > &synonyms)DigestionEnzyme
setValueFromFile(const String &key, const String &value) overrideDigestionEnzymeProteinvirtual
setXTandemID(const String &value)DigestionEnzymeProtein
synonyms_DigestionEnzymeprotected
xtandem_id_DigestionEnzymeProteinprotected
~DigestionEnzyme()DigestionEnzymevirtual
~DigestionEnzymeProtein() overrideDigestionEnzymeProtein