OpenMS  2.8.0
ICPLLabeler Member List

This is the complete list of members for ICPLLabeler, including all inherited members.

addLabelToProteinHits_(SimTypes::FeatureMapSim &features, const String &label) constICPLLabelerprotected
addModificationToPeptideHit_(Feature &feature, const String &modification) constICPLLabelerprotected
BaseLabeler()BaseLabeler
channel_description_BaseLabelerprotected
check_defaults_DefaultParamHandlerprotected
consensus_BaseLabelerprotected
create()ICPLLabelerinlinestatic
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
DefaultParamHandler()DefaultParamHandlerprivate
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
error_name_DefaultParamHandlerprotected
getChannelIntensityName(const Size channel_index) constBaseLabeler
getConsensus()BaseLabeler
getDefaultParameters() constBaseLabelervirtual
getDefaults() constDefaultParamHandler
getDescription() constBaseLabeler
getName() constDefaultParamHandler
getParameters() constDefaultParamHandler
getProductName()ICPLLabelerinlinestatic
getSubsections() constDefaultParamHandler
getUnmodifiedAASequence_(const Feature &feature, const String &label) constICPLLabelerprotected
heavy_channel_label_ICPLLabelerprotected
HEAVY_FEATURE_MAPID_ICPLLabelerprivatestatic
ICPLLabeler()ICPLLabeler
light_channel_label_ICPLLabelerprotected
LIGHT_FEATURE_MAPID_ICPLLabelerprivatestatic
medium_channel_label_ICPLLabelerprotected
MEDIUM_FEATURE_MAPID_ICPLLabelerprivatestatic
mergeFeatures_(Feature &labeled_channel_feature, const AASequence &unmodified_sequence, Map< String, Feature > &unlabeled_features_index) constICPLLabelerprotected
mergeProteinAccessions_(Feature &target, const Feature &source) constBaseLabelerprotected
mergeProteinIdentificationsMaps_(const SimTypes::FeatureMapSimVector &maps)BaseLabelerprotected
operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
operator==(const DefaultParamHandler &rhs) constDefaultParamHandlervirtual
param_DefaultParamHandlerprotected
postDetectabilityHook(SimTypes::FeatureMapSimVector &) overrideICPLLabelervirtual
postDigestHook(SimTypes::FeatureMapSimVector &) overrideICPLLabelervirtual
postIonizationHook(SimTypes::FeatureMapSimVector &) overrideICPLLabelervirtual
postRawMSHook(SimTypes::FeatureMapSimVector &) overrideICPLLabelervirtual
postRawTandemMSHook(SimTypes::FeatureMapSimVector &, SimTypes::MSSimExperiment &) overrideICPLLabelervirtual
postRTHook(SimTypes::FeatureMapSimVector &) overrideICPLLabelervirtual
preCheck(Param &param) const overrideICPLLabelervirtual
recomputeConsensus_(const SimTypes::FeatureMapSim &simulated_features)BaseLabelerprotected
registerChildren()BaseLabelerstatic
rng_BaseLabelerprotected
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
setRnd(SimTypes::MutableSimRandomNumberGeneratorPtr rng)BaseLabelervirtual
setUpHook(SimTypes::FeatureMapSimVector &) overrideICPLLabelervirtual
subsections_DefaultParamHandlerprotected
updateMembers_() overrideICPLLabelerprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &key_prefix="")DefaultParamHandlerstatic
~BaseLabeler() overrideBaseLabeler
~DefaultParamHandler()DefaultParamHandlervirtual
~ICPLLabeler() overrideICPLLabeler