OpenMS  2.8.0
IDDecoyProbability Member List

This is the complete list of members for IDDecoyProbability, including all inherited members.

apply(std::vector< PeptideIdentification > &prob_ids, const std::vector< PeptideIdentification > &fwd_ids, const std::vector< PeptideIdentification > &rev_ids)IDDecoyProbability
apply(std::vector< PeptideIdentification > &ids)IDDecoyProbability
apply_(std::vector< PeptideIdentification > &ids, const std::vector< double > &rev_scores, const std::vector< double > &fwd_scores, const std::vector< double > &all_scores)IDDecoyProbabilityprotected
check_defaults_DefaultParamHandlerprotected
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
DefaultParamHandler()DefaultParamHandlerprivate
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
error_name_DefaultParamHandlerprotected
generateDistributionImage_(const std::vector< double > &ids, const String &formula, const String &filename)IDDecoyProbabilityprotected
generateDistributionImage_(const std::vector< double > &all_ids, const Transformation_ &all_trans, const String &fwd_formula, const String &rev_formula, const String &filename)IDDecoyProbabilityprotected
getDefaults() constDefaultParamHandler
getName() constDefaultParamHandler
getParameters() constDefaultParamHandler
getProbability_(const Math::GammaDistributionFitter::GammaDistributionFitResult &result_gamma, const Transformation_ &gamma_trafo, const Math::GaussFitter::GaussFitResult &result_gauss, const Transformation_ &gauss_trafo, double score)IDDecoyProbabilityprotected
getSubsections() constDefaultParamHandler
IDDecoyProbability()IDDecoyProbability
IDDecoyProbability(const IDDecoyProbability &rhs)IDDecoyProbability
normalizeBins_(const std::vector< double > &scores, std::vector< double > &binned, Transformation_ &trafo)IDDecoyProbabilityprotected
operator=(const IDDecoyProbability &rhs)IDDecoyProbability
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
operator==(const DefaultParamHandler &rhs) constDefaultParamHandlervirtual
param_DefaultParamHandlerprotected
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
subsections_DefaultParamHandlerprotected
updateMembers_()DefaultParamHandlerprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &key_prefix="")DefaultParamHandlerstatic
~DefaultParamHandler()DefaultParamHandlervirtual
~IDDecoyProbability() overrideIDDecoyProbability