OpenMS  2.8.0
IDScoreGetterSetter Member List

This is the complete list of members for IDScoreGetterSetter, including all inherited members.

checkTDAnnotation_(const MetaInfoInterface &id_or_hit)IDScoreGetterSetterinlinestatic
getPeptideScoresFromMap_(ScoreToTgtDecLabelPairs &scores_labels, const ConsensusMap &cmap, bool include_unassigned_peptides, Args &&... args)IDScoreGetterSetterinlinestatic
getPickedProteinGroupScores_(const std::unordered_map< String, ScoreToTgtDecLabelPair > &picked_scores, ScoreToTgtDecLabelPairs &scores_labels, const std::vector< ProteinIdentification::ProteinGroup > &grps, const String &decoy_string, bool decoy_prefix)IDScoreGetterSetterstatic
getPickedProteinScores_(std::unordered_map< String, ScoreToTgtDecLabelPair > &picked_scores, const ProteinIdentification &id, const String &decoy_string, bool decoy_prefix)IDScoreGetterSetterstatic
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const std::vector< ProteinIdentification::ProteinGroup > &grps, const std::unordered_set< std::string > &decoy_accs)IDScoreGetterSetterstatic
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const ProteinIdentification &id)IDScoreGetterSetterinlinestatic
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const PeptideIdentification &id, bool all_hits, int charge, const String &identifier)IDScoreGetterSetterinlinestatic
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const PeptideIdentification &id, bool all_hits, const String &identifier)IDScoreGetterSetterinlinestatic
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const PeptideIdentification &id, int charge, const String &identifier)IDScoreGetterSetterinlinestatic
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const IDType &id, const String &identifier)IDScoreGetterSetterinlinestatic
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const PeptideIdentification &id, bool all_hits, Args &&... args)IDScoreGetterSetterinlinestatic
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const PeptideHit &hit, int charge)IDScoreGetterSetterinlinestatic
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const PeptideIdentification &id, int charge)IDScoreGetterSetterinlinestatic
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const HitType &hit)IDScoreGetterSetterinlinestatic
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const IDType &id)IDScoreGetterSetterinlinestatic
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const std::vector< PeptideIdentification > &ids, Args &&... args)IDScoreGetterSetterinlinestatic
getTDLabel_(const MetaInfoInterface &idOrHit)IDScoreGetterSetterinlinestatic
removeDecoyStringIfPresent_(const String &acc, const String &decoy_string, bool decoy_prefix)IDScoreGetterSetterstatic
setPeptideScoresForMap_(const std::map< double, double > &scores_to_FDR, ConsensusMap &cmap, bool include_unassigned_peptides, const std::string &score_type, bool higher_better, bool keep_decoy, Args &&... args)IDScoreGetterSetterinlinestatic
setScore_(const std::map< double, double > &scores_to_FDR, HitType &hit, const std::string &old_score_type)IDScoreGetterSetterinlinestatic
setScoreAndMoveIfTarget_(const std::map< double, double > &scores_to_FDR, HitType &hit, const std::string &old_score_type, std::vector< HitType > &new_hits)IDScoreGetterSetterinlinestatic
setScoreAndMoveIfTarget_(const std::map< double, double > &scores_to_FDR, PeptideHit &hit, const std::string &old_score_type, std::vector< PeptideHit > &new_hits, int charge)IDScoreGetterSetterinlinestatic
setScoreHigherWorse_(const std::map< double, double > &scores_to_FDR, HitType &hit, const std::string &old_score_type)IDScoreGetterSetterinlinestatic
setScoreHigherWorseAndMoveIfTarget_(const std::map< double, double > &scores_to_FDR, HitType &hit, const std::string &old_score_type, std::vector< HitType > &new_hits)IDScoreGetterSetterinlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, std::vector< IDType > &ids, const std::string &score_type, bool higher_better, Args &&... args)IDScoreGetterSetterinlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, IDType &id, const std::string &score_type, bool higher_better, bool keep_decoy)IDScoreGetterSetterinlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, IDType &id, const String &old_score_type)IDScoreGetterSetterinlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, PeptideIdentification &id, const std::string &score_type, bool higher_better, bool keep_decoy, int charge)IDScoreGetterSetterinlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, PeptideIdentification &id, const std::string &score_type, bool higher_better, bool keep_decoy, int charge, const String &identifier)IDScoreGetterSetterinlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, IDType &id, const std::string &score_type, bool higher_better, bool keep_decoy, const String &identifier)IDScoreGetterSetterinlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, PeptideIdentification &id, const std::string &score_type, bool higher_better, int charge, const String &identifier)IDScoreGetterSetterinlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, IDType &id, const std::string &score_type, bool higher_better, const String &identifier)IDScoreGetterSetterinlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, IDType &id, const std::string &score_type, bool higher_better, int charge)IDScoreGetterSetterinlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, std::vector< ProteinIdentification::ProteinGroup > &grps, const std::string &score_type, bool higher_better)IDScoreGetterSetterstatic
setScoresAndRemoveDecoys_(const std::map< double, double > &scores_to_FDR, IDType &id, const String &old_score_type, Args &&... args)IDScoreGetterSetterinlinestatic
setScoresHigherWorse_(const std::map< double, double > &scores_to_FDR, IDType &id, const String &old_score_type)IDScoreGetterSetterinlinestatic
setScoresHigherWorseAndRemoveDecoys_(const std::map< double, double > &scores_to_FDR, IDType &id, const String &old_score_type, Args &&... args)IDScoreGetterSetterinlinestatic
setScoreType_(IDType &id, const std::string &score_type, bool higher_better)IDScoreGetterSetterinlinestatic
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