OpenMS  2.8.0
MRMFeatureFilter Member List

This is the complete list of members for MRMFeatureFilter, including all inherited members.

accumulateFilterValues(std::vector< MRMFeatureQC > &filter_values, const std::vector< FeatureMap > &samples, const MRMFeatureQC &filter_template, const TargetedExperiment &transitions) constMRMFeatureFilter
calculateFilterValuesMean(MRMFeatureQC &filter_mean, const std::vector< MRMFeatureQC > &filter_values, const MRMFeatureQC &filter_template) constMRMFeatureFilter
calculateFilterValuesPercRSD(MRMFeatureQC &filter_rsd, const MRMFeatureQC &filter_mean, const MRMFeatureQC &filter_var) constMRMFeatureFilter
calculateFilterValuesVar(MRMFeatureQC &filter_var, const std::vector< MRMFeatureQC > &filter_values, const MRMFeatureQC &filter_mean, const MRMFeatureQC &filter_template) constMRMFeatureFilter
calculateIonRatio(const Feature &component_1, const Feature &component_2, const String &feature_name) constMRMFeatureFilter
calculateResolution(Feature &component_1, Feature &component_2) constMRMFeatureFilter
calculateRTDifference(Feature &component_1, Feature &component_2) constMRMFeatureFilter
check_defaults_DefaultParamHandlerprotected
checkMetaValue(const Feature &component, const String &meta_value_key, const double &meta_value_l, const double &meta_value_u, bool &key_exists) constMRMFeatureFilter
checkRange(const T &value, const T &value_l, const T &value_u) constMRMFeatureFilter
countLabelsAndTransitionTypes(const Feature &component_group, const TargetedExperiment &transitions) constMRMFeatureFilter
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
DefaultParamHandler()DefaultParamHandlerprivate
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
error_name_DefaultParamHandlerprotected
EstimateBackgroundInterferences(const std::vector< FeatureMap > &samples, MRMFeatureQC &filter_template, const TargetedExperiment &transitions) constMRMFeatureFilter
EstimateDefaultMRMFeatureQCValues(const std::vector< FeatureMap > &samples, MRMFeatureQC &filter_template, const TargetedExperiment &transitions, const bool &init_template_values) constMRMFeatureFilter
EstimatePercRSD(const std::vector< FeatureMap > &samples, MRMFeatureQC &filter_template, const TargetedExperiment &transitions) constMRMFeatureFilter
FilterFeatureMap(FeatureMap &features, const MRMFeatureQC &filter_criteria, const TargetedExperiment &transitions)MRMFeatureFilter
FilterFeatureMapBackgroundInterference(FeatureMap &features, const MRMFeatureQC &filter_criteria, const MRMFeatureQC &filter_values)MRMFeatureFilter
FilterFeatureMapPercRSD(FeatureMap &features, const MRMFeatureQC &filter_criteria, const MRMFeatureQC &filter_values)MRMFeatureFilter
flag_or_filter_MRMFeatureFilterprivate
getDefaultParameters(Param &params) constMRMFeatureFilter
getDefaults() constDefaultParamHandler
getName() constDefaultParamHandler
getParameters() constDefaultParamHandler
getSubsections() constDefaultParamHandler
getUniqueSorted(const StringList &messages) constMRMFeatureFilter
initMetaValue(const Feature &component, const String &meta_value_key, double &meta_value_l, double &meta_value_u, bool &key_exists) constMRMFeatureFilter
initRange(const T &value, T &value_l, T &value_u) constMRMFeatureFilter
MRMFeatureFilter()MRMFeatureFilter
operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
operator==(const DefaultParamHandler &rhs) constDefaultParamHandlervirtual
param_DefaultParamHandlerprotected
setMetaValue(const Feature &component, const String &meta_value_key, double &meta_value_l, double &meta_value_u, bool &key_exists) constMRMFeatureFilter
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
setRange(const T &value, T &value_l, T &value_u) constMRMFeatureFilter
subsections_DefaultParamHandlerprotected
TransferLLOQAndULOQToCalculatedConcentrationBounds(const std::vector< AbsoluteQuantitationMethod > &quantitation_method, MRMFeatureQC &filter_template)MRMFeatureFilter
updateMembers_() overrideMRMFeatureFiltervirtual
updateMetaValue(const Feature &component, const String &meta_value_key, double &meta_value_l, double &meta_value_u, bool &key_exists) constMRMFeatureFilter
updateRange(const T &value, T &value_l, T &value_u) constMRMFeatureFilter
warn_empty_defaults_DefaultParamHandlerprotected
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &key_prefix="")DefaultParamHandlerstatic
zeroFilterValues(MRMFeatureQC &filter_zeros, const MRMFeatureQC &filter_template) constMRMFeatureFilter
~DefaultParamHandler()DefaultParamHandlervirtual
~MRMFeatureFilter() overrideMRMFeatureFilter