OpenMS  2.8.0
MascotGenericFile Member List

This is the complete list of members for MascotGenericFile, including all inherited members.

check_defaults_DefaultParamHandlerprotected
CMD enum valueProgressLogger
current_logger_ProgressLoggermutableprotected
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
DefaultParamHandler()DefaultParamHandlerprivate
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
endProgress() constProgressLogger
error_name_DefaultParamHandlerprotected
getDefaults() constDefaultParamHandler
getHTTPPeakListEnclosure(const String &filename) constMascotGenericFile
getLogType() constProgressLogger
getName() constDefaultParamHandler
getNextSpectrum_(std::ifstream &is, SpectrumType &spectrum, Size &line_number, const Size &spectrum_number)MascotGenericFileinlineprotected
getParameters() constDefaultParamHandler
getSubsections() constDefaultParamHandler
GUI enum valueProgressLogger
last_invoke_ProgressLoggermutableprotected
load(const String &filename, MapType &exp)MascotGenericFileinline
LogType enum nameProgressLogger
logTypeToFactoryName_(LogType type)ProgressLoggerprotectedstatic
MascotGenericFile()MascotGenericFile
mod_group_map_MascotGenericFileprotected
nextProgress() constProgressLogger
NONE enum valueProgressLogger
OpenMS::operator=(const ProgressLogger &other)ProgressLogger
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
operator==(const DefaultParamHandler &rhs) constDefaultParamHandlervirtual
param_DefaultParamHandlerprotected
ProgressLogger()ProgressLogger
ProgressLogger(const ProgressLogger &other)ProgressLogger
recursion_depth_ProgressLoggerprotectedstatic
setLogType(LogType type) constProgressLogger
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
setProgress(SignedSize value) constProgressLogger
startProgress(SignedSize begin, SignedSize end, const String &label) constProgressLogger
store(const String &filename, const PeakMap &experiment, bool compact=false)MascotGenericFile
store(std::ostream &os, const String &filename, const PeakMap &experiment, bool compact=false)MascotGenericFile
store_compact_MascotGenericFileprotected
subsections_DefaultParamHandlerprotected
type_ProgressLoggermutableprotected
updateMembers_() overrideMascotGenericFilevirtual
warn_empty_defaults_DefaultParamHandlerprotected
writeHeader_(std::ostream &os)MascotGenericFileprotected
writeModifications_(const std::vector< String > &mods, std::ostream &os, bool variable_mods=false)MascotGenericFileprotected
writeMSExperiment_(std::ostream &os, const String &filename, const PeakMap &experiment)MascotGenericFileprotected
writeParameterHeader_(const String &name, std::ostream &os)MascotGenericFileprotected
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &key_prefix="")DefaultParamHandlerstatic
writeSpectrum(std::ostream &os, const PeakSpectrum &spec, const String &filename, const String &native_id_type_accession)MascotGenericFile
~DefaultParamHandler()DefaultParamHandlervirtual
~MascotGenericFile() overrideMascotGenericFile
~ProgressLogger()ProgressLoggervirtual