OpenMS
2.8.0
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This is the complete list of members for ModificationDefinitionsSet, including all inherited members.
addMatches_(std::multimap< double, ModificationDefinition > &matches, double mass, const String &residue, ResidueModification::TermSpecificity term_spec, const std::set< ModificationDefinition > &source, bool is_delta, double tolerance) | ModificationDefinitionsSet | protectedstatic |
addModification(const ModificationDefinition &mod_def) | ModificationDefinitionsSet | |
findMatches(std::multimap< double, ModificationDefinition > &matches, double mass, const String &residue="", ResidueModification::TermSpecificity term_spec=ResidueModification::NUMBER_OF_TERM_SPECIFICITY, bool consider_fixed=true, bool consider_variable=true, bool is_delta=true, double tolerance=0.01) const | ModificationDefinitionsSet | |
fixed_mods_ | ModificationDefinitionsSet | protected |
getFixedModificationNames() const | ModificationDefinitionsSet | |
getFixedModifications() const | ModificationDefinitionsSet | |
getMaxModifications() const | ModificationDefinitionsSet | |
getModificationNames() const | ModificationDefinitionsSet | |
getModificationNames(StringList &fixed_modifications, StringList &variable_modifications) const | ModificationDefinitionsSet | |
getModifications() const | ModificationDefinitionsSet | |
getNumberOfFixedModifications() const | ModificationDefinitionsSet | |
getNumberOfModifications() const | ModificationDefinitionsSet | |
getNumberOfVariableModifications() const | ModificationDefinitionsSet | |
getVariableModificationNames() const | ModificationDefinitionsSet | |
getVariableModifications() const | ModificationDefinitionsSet | |
inferFromPeptides(const std::vector< PeptideIdentification > &peptides) | ModificationDefinitionsSet | |
isCompatible(const AASequence &peptide) const | ModificationDefinitionsSet | |
max_mods_per_peptide_ | ModificationDefinitionsSet | protected |
ModificationDefinitionsSet() | ModificationDefinitionsSet | |
ModificationDefinitionsSet(const ModificationDefinitionsSet &rhs) | ModificationDefinitionsSet | |
ModificationDefinitionsSet(const StringList &fixed_modifications, const StringList &variable_modifications) | ModificationDefinitionsSet | |
operator!=(const ModificationDefinitionsSet &rhs) const | ModificationDefinitionsSet | |
operator=(const ModificationDefinitionsSet &element) | ModificationDefinitionsSet | |
operator==(const ModificationDefinitionsSet &rhs) const | ModificationDefinitionsSet | |
setMaxModifications(Size max_mod) | ModificationDefinitionsSet | |
setModifications(const std::set< ModificationDefinition > &mod_defs) | ModificationDefinitionsSet | |
setModifications(const String &fixed_modifications, const String &variable_modifications) | ModificationDefinitionsSet | |
setModifications(const StringList &fixed_modifications, const StringList &variable_modifications) | ModificationDefinitionsSet | |
variable_mods_ | ModificationDefinitionsSet | protected |
~ModificationDefinitionsSet() | ModificationDefinitionsSet | virtual |