OpenMS  2.8.0
NASequence Member List

This is the complete list of members for NASequence, including all inherited members.

AIon enum valueNASequence
AminusB enum valueNASequence
begin()NASequenceinline
begin() constNASequenceinline
BIon enum valueNASequence
BIonMinusH20 enum valueNASequence
BIonMinusNH3 enum valueNASequence
cbegin() constNASequenceinline
cend() constNASequenceinline
CIon enum valueNASequence
clear()NASequence
ConstRibonucleotidePtr typedefNASequence
DIon enum valueNASequence
empty() constNASequence
end()NASequenceinline
end() constNASequenceinline
five_prime_NASequenceprivate
FivePrime enum valueNASequence
fromString(const String &s)NASequencestatic
fromString(const char *s)NASequencestatic
Full enum valueNASequence
get(size_t index)NASequenceinline
getAverageWeight(NASFragmentType type=Full, Int charge=0) constNASequence
getFivePrimeMod() constNASequence
getFormula(NASFragmentType type=Full, Int charge=0) constNASequence
getMonoWeight(NASFragmentType type=Full, Int charge=0) constNASequence
getPrefix(Size length) constNASequence
getSequence() constNASequenceinline
getSequence()NASequenceinline
getSubsequence(Size start=0, Size length=Size(-1)) constNASequence
getSuffix(Size length) constNASequence
getThreePrimeMod() constNASequence
hasFivePrimeMod() constNASequence
hasThreePrimeMod() constNASequence
Internal enum valueNASequence
NASequence()=defaultNASequence
NASequence(const NASequence &)=defaultNASequence
NASequence(NASequence &&)=defaultNASequence
NASequence(std::vector< const Ribonucleotide * > s, const RibonucleotideChainEnd *five_prime, const RibonucleotideChainEnd *three_prime)NASequence
NASFragmentType enum nameNASequence
NonIdentified enum valueNASequence
operator!=(const NASequence &rhs) constNASequence
operator<(const NASequence &rhs) constNASequence
operator<<(std::ostream &os, const NASequence &seq)NASequencefriend
operator=(const NASequence &) &=defaultNASequence
operator=(NASequence &&) &=defaultNASequence
operator==(const NASequence &rhs) constNASequence
operator[](size_t index)NASequenceinline
operator[](size_t index) constNASequenceinline
parseMod_(const String::ConstIterator str_it, const String &str, NASequence &nas)NASequenceprivatestatic
parseString_(const String &s, NASequence &nas)NASequenceprivatestatic
Precursor enum valueNASequence
seq_NASequenceprivate
set(size_t index, const Ribonucleotide *r)NASequence
setFivePrimeMod(const RibonucleotideChainEnd *r)NASequence
setSequence(const std::vector< const Ribonucleotide * > &seq)NASequence
setThreePrimeMod(const RibonucleotideChainEnd *r)NASequence
size() constNASequence
SizeOfNASFragmentType enum valueNASequence
three_prime_NASequenceprivate
ThreePrime enum valueNASequence
toString() constNASequence
Unannotated enum valueNASequence
WIon enum valueNASequence
XIon enum valueNASequence
YIon enum valueNASequence
YIonMinusH20 enum valueNASequence
YIonMinusNH3 enum valueNASequence
ZIon enum valueNASequence
~NASequence()=defaultNASequencevirtual
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