OpenMS  2.8.0
NeedlemanWunsch Member List

This is the complete list of members for NeedlemanWunsch, including all inherited members.

align(const String &seq1, const String &seq2)NeedlemanWunsch
first_row_NeedlemanWunschprivate
gap_penalty_NeedlemanWunschprivate
getMatrix() constNeedlemanWunsch
getPenalty() constNeedlemanWunsch
my_matrix_NeedlemanWunschprivate
NamesOfScoringMatricesNeedlemanWunschstatic
NeedlemanWunsch(ScoringMatrix matrix, int penalty)NeedlemanWunsch
NeedlemanWunsch()=defaultNeedlemanWunsch
ScoringMatrix enum nameNeedlemanWunsch
second_row_NeedlemanWunschprivate
setMatrix(const ScoringMatrix &matrix)NeedlemanWunsch
setMatrix(const std::string &matrix)NeedlemanWunsch
setPenalty(const int penalty)NeedlemanWunsch
~NeedlemanWunsch()=defaultNeedlemanWunsch
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