OpenMS  2.8.0
PeakIntegrator Member List

This is the complete list of members for PeakIntegrator, including all inherited members.

baseline_type_PeakIntegratorprivate
BASELINE_TYPE_BASETOBASEPeakIntegratorstatic
BASELINE_TYPE_VERTICALDIVISIONPeakIntegratorstatic
BASELINE_TYPE_VERTICALDIVISION_MAXPeakIntegratorstatic
BASELINE_TYPE_VERTICALDIVISION_MINPeakIntegratorstatic
calculatePeakShapeMetrics(const MSChromatogram &chromatogram, const double left, const double right, const double peak_height, const double peak_apex_pos) constPeakIntegrator
calculatePeakShapeMetrics(const MSChromatogram &chromatogram, MSChromatogram::ConstIterator &left, MSChromatogram::ConstIterator &right, const double peak_height, const double peak_apex_pos) constPeakIntegrator
calculatePeakShapeMetrics(const MSSpectrum &spectrum, const double left, const double right, const double peak_height, const double peak_apex_pos) constPeakIntegrator
calculatePeakShapeMetrics(const MSSpectrum &spectrum, MSSpectrum::ConstIterator &left, MSSpectrum::ConstIterator &right, const double peak_height, const double peak_apex_pos) constPeakIntegrator
calculatePeakShapeMetrics_(const PeakContainerT &pc, double left, double right, const double peak_height, const double peak_apex_pos) constPeakIntegratorinlineprotected
check_defaults_DefaultParamHandlerprotected
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
DefaultParamHandler()DefaultParamHandlerprivate
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
emg_PeakIntegratorprivate
EMGPreProcess_(const PeakContainerT &pc, PeakContainerT &emg_pc, double &left, double &right) constPeakIntegratorinlineprivate
error_name_DefaultParamHandlerprotected
estimateBackground(const MSChromatogram &chromatogram, const double left, const double right, const double peak_apex_pos) constPeakIntegrator
estimateBackground(const MSChromatogram &chromatogram, MSChromatogram::ConstIterator &left, MSChromatogram::ConstIterator &right, const double peak_apex_pos) constPeakIntegrator
estimateBackground(const MSSpectrum &spectrum, const double left, const double right, const double peak_apex_pos) constPeakIntegrator
estimateBackground(const MSSpectrum &spectrum, MSSpectrum::ConstIterator &left, MSSpectrum::ConstIterator &right, const double peak_apex_pos) constPeakIntegrator
estimateBackground_(const PeakContainerT &pc, double left, double right, const double peak_apex_pos) constPeakIntegratorinlineprotected
findPosAtPeakHeightPercent_(PeakContainerConstIteratorT it_left, PeakContainerConstIteratorT it_right, PeakContainerConstIteratorT it_end, const double peak_height, const double percent, const bool is_left_half) constPeakIntegratorinlineprotected
fit_EMG_PeakIntegratorprivate
getDefaultParameters(Param &params)PeakIntegrator
getDefaults() constDefaultParamHandler
getName() constDefaultParamHandler
getParameters() constDefaultParamHandler
getSubsections() constDefaultParamHandler
integratePeak(const MSChromatogram &chromatogram, const double left, const double right) constPeakIntegrator
integratePeak(const MSChromatogram &chromatogram, MSChromatogram::ConstIterator &left, MSChromatogram::ConstIterator &right) constPeakIntegrator
integratePeak(const MSSpectrum &spectrum, const double left, const double right) constPeakIntegrator
integratePeak(const MSSpectrum &spectrum, MSSpectrum::ConstIterator &left, MSSpectrum::ConstIterator &right) constPeakIntegrator
integratePeak_(const PeakContainerT &pc, double left, double right) constPeakIntegratorinlineprotected
integration_type_PeakIntegratorprivate
INTEGRATION_TYPE_INTENSITYSUMPeakIntegratorstatic
INTEGRATION_TYPE_SIMPSONPeakIntegratorstatic
INTEGRATION_TYPE_TRAPEZOIDPeakIntegratorstatic
operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
operator==(const DefaultParamHandler &rhs) constDefaultParamHandlervirtual
param_DefaultParamHandlerprotected
PeakIntegrator()PeakIntegrator
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
simpson_(PeakContainerConstIteratorT it_begin, PeakContainerConstIteratorT it_end) constPeakIntegratorinlineprotected
subsections_DefaultParamHandlerprotected
updateMembers_() overridePeakIntegratorprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &key_prefix="")DefaultParamHandlerstatic
~DefaultParamHandler()DefaultParamHandlervirtual
~PeakIntegrator() overridePeakIntegrator