OpenMS  2.8.0
PeakPickerCWT Member List

This is the complete list of members for PeakPickerCWT, including all inherited members.

addPeak_(std::vector< PeakShape > &peaks_DC, PeakArea_ &area, double left_width, double right_width, OptimizePeakDeconvolution::Data &data) constPeakPickerCWTprotected
check_defaults_DefaultParamHandlerprotected
CMD enum valueProgressLogger
ConstPeakIterator typedefPeakPickerCWT
correlate_(const PeakShape &peak, const PeakArea_ &area, Int direction=0) constPeakPickerCWTprotected
current_logger_ProgressLoggermutableprotected
deconvolutePeak_(PeakShape &shape, std::vector< PeakShape > &peak_shapes, double peak_bound_cwt) constPeakPickerCWTprotected
deconvolution_PeakPickerCWTprotected
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
DefaultParamHandler()DefaultParamHandlerprivate
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
determineChargeState_(std::vector< double > &peak_values) constPeakPickerCWTprotected
endProgress() constProgressLogger
error_name_DefaultParamHandlerprotected
estimatePeakWidth(const PeakMap &input)PeakPickerCWT
fitPeakShape_(const PeakArea_ &area) constPeakPickerCWTprotected
fwhm_bound_PeakPickerCWTprotected
getDefaults() constDefaultParamHandler
getLogType() constProgressLogger
getMaxPosition_(const PeakIterator first, const PeakIterator last, const ContinuousWaveletTransform &wt, PeakArea_ &area, const Int distance_from_scan_border, const double peak_bound_cwt, const double peak_bound_ms2_level_cwt, const Int direction=1) constPeakPickerCWTprotected
getName() constDefaultParamHandler
getNumberOfPeaks_(ConstPeakIterator first, ConstPeakIterator last, std::vector< double > &peak_values, Int direction, double resolution, ContinuousWaveletTransformNumIntegration &wt, double peak_bound_cwt) constPeakPickerCWTprotected
getParameters() constDefaultParamHandler
getPeakArea_(const PeakArea_ &area, double &area_left, double &area_right) constPeakPickerCWTprotected
getPeakCentroid_(PeakArea_ &area) constPeakPickerCWTprotected
getPeakEndPoints_(PeakIterator first, PeakIterator last, PeakArea_ &area, Int distance_from_scan_border, Int &peak_left_index, Int &peak_right_index, ContinuousWaveletTransformNumIntegration &wt) constPeakPickerCWTprotected
getSubsections() constDefaultParamHandler
GUI enum valueProgressLogger
initializeWT_(ContinuousWaveletTransformNumIntegration &wt, const double peak_bound_in, double &peak_bound_ms_cwt) constPeakPickerCWTprotected
last_invoke_ProgressLoggermutableprotected
LogType enum nameProgressLogger
logTypeToFactoryName_(LogType type)ProgressLoggerprotectedstatic
lorentz_(const double height, const double lambda, const double pos, const double x) constPeakPickerCWTinlineprotected
nextProgress() constProgressLogger
noise_level_PeakPickerCWTprotected
NONE enum valueProgressLogger
OpenMS::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
OpenMS::ProgressLogger::operator=(const ProgressLogger &other)ProgressLogger
operator==(const DefaultParamHandler &rhs) constDefaultParamHandlervirtual
optimization_PeakPickerCWTprotected
param_DefaultParamHandlerprotected
peak_bound_PeakPickerCWTprotected
peak_bound_ms2_level_PeakPickerCWTprotected
peak_corr_bound_PeakPickerCWTprotected
PeakIterator typedefPeakPickerCWT
PeakPickerCWT()PeakPickerCWT
pick(const MSSpectrum &input, MSSpectrum &output) constPeakPickerCWT
pickExperiment(const PeakMap &input, PeakMap &output)PeakPickerCWT
ProgressLogger()ProgressLogger
ProgressLogger(const ProgressLogger &other)ProgressLogger
radius_PeakPickerCWTprotected
recursion_depth_ProgressLoggerprotectedstatic
scale_PeakPickerCWTprotected
setLogType(LogType type) constProgressLogger
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
setProgress(SignedSize value) constProgressLogger
signal_to_noise_PeakPickerCWTprotected
startProgress(SignedSize begin, SignedSize end, const String &label) constProgressLogger
subsections_DefaultParamHandlerprotected
two_d_optimization_PeakPickerCWTprotected
type_ProgressLoggermutableprotected
updateMembers_() overridePeakPickerCWTprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &key_prefix="")DefaultParamHandlerstatic
~DefaultParamHandler()DefaultParamHandlervirtual
~PeakPickerCWT() overridePeakPickerCWT
~ProgressLogger()ProgressLoggervirtual