OpenMS  2.8.0
TOFCalibration Member List

This is the complete list of members for TOFCalibration, including all inherited members.

a_TOFCalibrationprivate
applyTOFConversion_(PeakMap &calib_spectra)TOFCalibrationprivate
averageCoefficients_()TOFCalibrationprivate
averageErrors_()TOFCalibrationprivate
b_TOFCalibrationprivate
c_TOFCalibrationprivate
calculateCalibCoeffs_(PeakMap &calib_peaks_ft)TOFCalibrationprivate
calib_masses_TOFCalibrationprivate
calib_peaks_ft_TOFCalibrationprivate
calibrate(PeakMap &calib_spectra, PeakMap &exp, std::vector< double > &exp_masses)TOFCalibration
check_defaults_DefaultParamHandlerprotected
CMD enum valueProgressLogger
coeff_quad_fit_TOFCalibrationprivate
current_logger_ProgressLoggermutableprotected
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
DefaultParamHandler()DefaultParamHandlerprivate
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
endProgress() constProgressLogger
error_medians_TOFCalibrationprivate
error_name_DefaultParamHandlerprotected
errors_TOFCalibrationprivate
exp_masses_TOFCalibrationprivate
getDefaults() constDefaultParamHandler
getLogType() constProgressLogger
getML1s() constTOFCalibrationinline
getML2s() constTOFCalibrationinline
getML3s() constTOFCalibrationinline
getMonoisotopicPeaks_(PeakMap &calib_peaks, std::vector< std::vector< unsigned int > > &monoiso_peaks)TOFCalibrationprivate
getName() constDefaultParamHandler
getParameters() constDefaultParamHandler
getSubsections() constDefaultParamHandler
GUI enum valueProgressLogger
last_invoke_ProgressLoggermutableprotected
LogType enum nameProgressLogger
logTypeToFactoryName_(LogType type)ProgressLoggerprotectedstatic
matchMasses_(PeakMap &calib_peaks, std::vector< std::vector< unsigned int > > &monoiso_peaks, std::vector< unsigned int > &obs_masses, std::vector< double > &exp_masses, unsigned int idx)TOFCalibrationprivate
ml1s_TOFCalibrationprivate
ml2s_TOFCalibrationprivate
ml3s_TOFCalibrationprivate
mQ_(double ft, unsigned int spec)TOFCalibrationinlineprivate
mQAv_(double ft) constTOFCalibrationinlineprivate
nextProgress() constProgressLogger
NONE enum valueProgressLogger
OpenMS::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
OpenMS::ProgressLogger::operator=(const ProgressLogger &other)ProgressLogger
operator==(const DefaultParamHandler &rhs) constDefaultParamHandlervirtual
param_DefaultParamHandlerprotected
pickAndCalibrate(PeakMap &calib_spectra, PeakMap &exp, std::vector< double > &exp_masses)TOFCalibration
ProgressLogger()ProgressLogger
ProgressLogger(const ProgressLogger &other)ProgressLogger
recursion_depth_ProgressLoggerprotectedstatic
setLogType(LogType type) constProgressLogger
setML1s(const std::vector< double > &ml1s)TOFCalibrationinline
setML2s(const std::vector< double > &ml2s)TOFCalibrationinline
setML3s(const std::vector< double > &ml3s)TOFCalibrationinline
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
setProgress(SignedSize value) constProgressLogger
startProgress(SignedSize begin, SignedSize end, const String &label) constProgressLogger
subsections_DefaultParamHandlerprotected
TOFCalibration()TOFCalibration
type_ProgressLoggermutableprotected
updateMembers_()DefaultParamHandlerprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &key_prefix="")DefaultParamHandlerstatic
~DefaultParamHandler()DefaultParamHandlervirtual
~ProgressLogger()ProgressLoggervirtual
~TOFCalibration() overrideTOFCalibration
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